Author details

Full Name

Matthias Samwald

Affiliation

Institute of Artificial Intelligence, Medical University of Vienna

ORCID

Career Start Year

2007

Papers

H Index

Expertise

CM4AI Collaborator

Timothy Clark (CM4AI)

PMID	Paper Title	Journal Title	Published Year
36539106	Benchmark datasets driving artificial intelligence development fail to capture the needs of medical professionals.	J Biomed Inform	2023
37553439	ThoughtSource: A central hub for large language model reasoning data.	Sci Data	2023
35139158	LinkExplorer: predicting, explaining and exploring links in large biomedical knowledge graphs.	Bioinformatics	2022
35675343	Pharmacogenomics decision support in the U-PGx project: Results and advice from clinical implementation across seven European countries.	PLoS One	2022
35717011	Improving the robustness and accuracy of biomedical language models through adversarial training.	J Biomed Inform	2022
35715466	A curated, ontology-based, large-scale knowledge graph of artificial intelligence tasks and benchmarks.	Sci Data	2022
35930855	Relational local electroencephalography representations for sleep scoring.	Neural Netw	2022
36357391	Mapping global dynamics of benchmark creation and saturation in artificial intelligence.	Nat Commun	2022
34922459	The roles of predictors in cardiovascular risk models - a question of modeling culture?	BMC Med Res Methodol	2021
33534720	Explaining Black-Box Models for Biomedical Text Classification.	IEEE J Biomed Health Inform	2021
34945740	Convolutional Neural Networks for Fully Automated Diagnosis of Cardiac Amyloidosis by Cardiac Magnetic Resonance Imaging.	J Pers Med	2021
31627150	Deep contextualized embeddings for quantifying the informative content in biomedical text summarization.	Comput Methods Programs Biomed	2020
32339214	OpenBioLink: a benchmarking framework for large-scale biomedical link prediction.	Bioinformatics	2020
32439479	Summarization of biomedical articles using domain-specific word embeddings and graph ranking.	J Biomed Inform	2020
32375287	Machine Learning Enables Prediction of Cardiac Amyloidosis by Routine Laboratory Parameters: A Proof-of-Concept Study.	J Clin Med	2020
32317559	Generating evidence for precision medicine: considerations made by the Ubiquitous Pharmacogenomics Consortium when designing and operationalizing the PREPARE study.	Pharmacogenet Genomics	2020
30975071	Neural sentence embedding models for semantic similarity estimation in the biomedical domain.	BMC Bioinformatics	2019
29444243	Implementing pharmacogenomics decision support across seven European countries: The Ubiquitous Pharmacogenomics (U-PGx) project.	J Am Med Inform Assoc	2018
30577747	Fast and scalable neural embedding models for biomedical sentence classification.	BMC Bioinformatics	2018
29726435	Effects of Medical Device Regulations on the Development of Stand-Alone Medical Software: A Pilot Study.	Stud Health Technol Inform	2018
28027596	Implementing Pharmacogenomics in Europe: Design and Implementation Strategy of the Ubiquitous Pharmacogenomics Consortium.	Clin Pharmacol Ther	2017
30239993	CORRIGENDUM: Implementing Pharmacogenomics in Europe: Design and Implementation Strategy of the Ubiquitous Pharmacogenomics Consortium.	Clin Pharmacol Ther	2017
28508787	The Importance of Gene-Drug-Drug-Interactions in Pharmacogenomics Decision Support: An Analysis Based on Austrian Claims Data.	Stud Health Technol Inform	2017
26925317	Examining perceptions of the usefulness and usability of a mobile-based system for pharmacogenomics clinical decision support: a mixed methods study.	PeerJ	2016
27764192	Incidence of Exposure of Patients in the United States to Multiple Drugs for Which Pharmacogenomic Guidelines Are Available.	PLoS One	2016
27721464	Erratum: Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis.	Nat Commun	2016
27139411	How Many Patients Could Benefit From Pre-emptive Pharmacogenomic Testing and Decision Support? A Retrospective Study Based on Nationwide Austrian Claims Data.	Stud Health Technol Inform	2016
27577544	A brighter future for the implementation of pharmacogenomic testing.	Eur J Hum Genet	2016
25944105	Utilizing the Wikidata system to improve the quality of medical content in Wikipedia in diverse languages: a pilot study.	J Med Internet Res	2015
26419264	Analyzing the potential for incorrect haplotype calls with different pharmacogenomic assays in different populations: a simulation based on 1000 Genomes data.	Pharmacogenomics	2015
25917055	Toward a complete dataset of drug-drug interaction information from publicly available sources.	J Biomed Inform	2015
25880555	Pharmacogenomic knowledge representation, reasoning and genome-based clinical decision support based on OWL 2 DL ontologies.	BMC Med Inform Decis Mak	2015
24602174	The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery.	J Biomed Semantics	2014
25717393	Drug-drug interaction data source survey and linking.	AMIA Jt Summits Transl Sci Proc	2014
25160253	Exploring the application of deep learning techniques on medical text corpora.	Stud Health Technol Inform	2014
25160206	An open-source, mobile-friendly search engine for public medical knowledge.	Stud Health Technol Inform	2014
25160186	Towards a global IT system for personalized medicine: the Medicine Safety Code initiative.	Stud Health Technol Inform	2014
24825681	Towards a global IT system for personalized medicine: the Medicine Safety Code initiative.	Stud Health Technol Inform	2014
24787444	An ontology-based, mobile-optimized system for pharmacogenomic decision support at the point-of-care.	PLoS One	2014
23345409	Pharmacogenomics in the pocket of every patient? A prototype based on quick response codes.	J Am Med Inform Assoc	2013
24088121	Making data on essential pharmacogenes available for every patient everywhere: the Medicine Safety Code initiative.	Pharmacogenomics	2013
23920877	Physicians searching the web for medical question answering: a European survey and local user studies.	Stud Health Technol Inform	2013
23920613	An RDF/OWL knowledge base for query answering and decision support in clinical pharmacogenetics.	Stud Health Technol Inform	2013
23803299	Utilization and perceived problems of online medical resources and search tools among different groups of European physicians.	J Med Internet Res	2013
23398680	The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies.	J Biomed Semantics	2013
22342733	The Arden Syntax standard for clinical decision support: experiences and directions.	J Biomed Inform	2012
22874279	A data-driven living review for pharmacogenomic decision support in cancer treatment.	Stud Health Technol Inform	2012
22256869	Semantically enabling pharmacogenomic data for the realization of personalized medicine.	Pharmacogenomics	2012
21575203	Linked open drug data for pharmaceutical research and development.	J Cheminform	2011
21893735	Towards an interoperable information infrastructure providing decision support for genomic medicine.	Stud Health Technol Inform	2011

1 - 50 of 60

Andrew Wen

Mayo Clinic

Career Start Year 2017

Number of shared co-authors 1

Sijia Liu

Mayo Clinic, University at Buffalo - North Campus

Career Start Year 2016

Number of shared co-authors 1

Nansu Zong

Mayo Clinic

Career Start Year 2016

Number of shared co-authors 1

Liwei Wang

University of Texas Health Science Center at Houston, Mayo Clinic

Career Start Year 2013

Number of shared co-authors 3

Alejandro Rodr??guez-Gonz??lez

Centro de Tecnologia Biomedica. Universidad Politecnica de Madrid

Career Start Year 2012

Number of shared co-authors 3

Soheil Moosavinasab

The Research Institute at Nationwide Children's Hospital

Career Start Year 2012

Number of shared co-authors 1

Feichen Shen

Shanghai Polytechnic University

Career Start Year 2012

Number of shared co-authors 2

Feifan Liu

College of Ethnic Medicine, Yunnan University of Chinese Medicine

Career Start Year 2010

Number of shared co-authors 1

Lixia Yao

Merck & Co., Inc.

Career Start Year 2008

Number of shared co-authors 1

Paul Avillach

Harvard Medical School

Career Start Year 2007

Number of shared co-authors 6

Jessica D Tenenbaum

Duke University

Career Start Year 2006

Number of shared co-authors 3

Karin Verspoor

National Centre for Infections in Cancer, 5Peter MacCallum Cancer Centre

Career Start Year 2005

Number of shared co-authors 3

Jyotishman Pathak

Cornell University

Career Start Year 2005

Number of shared co-authors 4

Trevor Cohen

University of Washington (A.M.U., University of Washington (J.S.

Career Start Year 2004

Number of shared co-authors 2

Philip R O Payne

Institute for Informatics, Washington University School of Medicine in St. Louis

Career Start Year 2003

Number of shared co-authors 3

Chunhua Weng

Columbia University Irving Medical Center

Career Start Year 2002

Number of shared co-authors 5

Cui Tao

The University of Texas Health Science Center at Houston

Career Start Year 2002

Number of shared co-authors 5

Nigam H Shah

Stanford University

Career Start Year 2002

Number of shared co-authors 11

Guoqian Jiang

Mayo Clinic Rochester Minnesota USA.

Career Start Year 2002

Number of shared co-authors 5

Javed Mostafa

University of North Carolina at Chapel Hill

Career Start Year 2001

Number of shared co-authors 0

Indra Neil Sarkar

Center for Biomedical Informatics, Brown University

Career Start Year 2001

Number of shared co-authors 3

Joshua C Denny

Vanderbilt University

Career Start Year 2000

Number of shared co-authors 6

Elmer V Bernstam

The University of Texas Health Science Center at Houston

Career Start Year 2000

Number of shared co-authors 4

Hongfang Liu

Mayo Clinic

Career Start Year 1999

Number of shared co-authors 5

Antoine Neuraz

INSERM UMR 3, Universite Paris Cite, Imagine Institute

Career Start Year 1994

Number of shared co-authors 0

Peter Tarczy-Hornoch

University of Washington School of Medicine, University of Washington

Career Start Year 1992

Number of shared co-authors 2

Carol Friedman

Columbia University

Career Start Year 1990

Number of shared co-authors 3

Peter Szolovits

Massachusetts Institute of Technology

Career Start Year 1986

Number of shared co-authors 1

Peter L Elkin

Jacobs School of Medicine and Biomedical Sciences, University at Buffalo

Career Start Year 1985

Number of shared co-authors 0

Christopher G Chute

Brown University, Brown University Warren Alpert Medical School, Dartmouth-Hitchcock Medical Center, Harvard School of Public Health, Johns Hopkins Medicine, Mayo Clinic Minnesota

Career Start Year 1985

Number of shared co-authors 13

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