|
| 37096985 | Quantification of congruence among gene trees with polytomies using overall success of resolution for phylogenomic coalescent analyses. | | 2023 |
| 38002961 | Three Blind Moles: Molecular Evolutionary Insights on the Tempo and Mode of Convergent Eye Degeneration in (Southern Marsupial Mole) and Two Chrysochlorids (Golden Moles). | | 2023 |
| 37104599 | Evolutionary constraint and innovation across hundreds of placental mammals. | Science | 2023 |
| 34748873 | Gene-tree misrooting drives conflicts in phylogenomic coalescent analyses of palaeognath birds. | Molecular Phylogenetics and Evolution | 2022 |
| 35885951 | Phylogenomic Coalescent Analyses of Avian Retroelements Infer Zero-Length Branches at the Base of Neoaves, Emergent Support for Controversial Clades, and Ancient Introgressive Hybridization in Afroaves. | Genes | 2022 |
| 35627151 | Contradictory Phylogenetic Signals in the Laurasiatheria Anomaly Zone. | Genes (Basel) | 2022 |
| 35358696 | Molecular evolutionary analyses of tooth genes support sequential loss of enamel and teeth in baleen whales (Mysticeti). | Molecular Phylogenetics and Evolution | 2022 |
| 34677617 | Theoretical and Practical Considerations when using Retroelement Insertions to Estimate Species Trees in the Anomaly Zone. | Systematic Biology | 2022 |
| 34534236 | The effects of fossil taxa, hypothetical predicted ancestors, and a molecular scaffold on pseudoextinction analyses of extant placental orders. | PLoS ONE | 2021 |
| 33798433 | Genomic and anatomical comparisons of skin support independent adaptation to life in water by cetaceans and hippos. | Current Biology | 2021 |
| 33949308 | Myoglobin primary structure reveals multiple convergent transitions to semi-aquatic life in the world's smallest mammalian divers. | eLife | 2021 |
| 33228377 | Phylogenomics and the Genetic Architecture of the Placental Mammal Radiation. | Annual Review of Animal Biosciences | 2021 |
| 34702078 | Speciation in the deep: genomics and morphology reveal a new species of beaked whale . | | 2021 |
| 31837265 | ILS-Aware Analysis of Low-Homoplasy Retroelement Insertions: Inference of Species Trees and Introgression Using Quartets. | Journal of Heredity | 2020 |
| 30828717 | Emergence of a Chimeric Globin Pseudogene and Increased Hemoglobin Oxygen Affinity Underlie the Evolution of Aquatic Specializations in Sirenia. | Molecular Biology and Evolution | 2019 |
| 31850081 | Evolutionary Models for the Diversification of Placental Mammals Across the KPg Boundary. | Frontiers in Genetics | 2019 |
| 31579821 | Genes lost during the transition from land to water in cetaceans highlight genomic changes associated with aquatic adaptations. | Science advances | 2019 |
| 30391518 | Gene-wise resampling outperforms site-wise resampling in phylogenetic coalescence analyses. | Molecular Phylogenetics and Evolution | 2019 |
| 30652306 | In love and war: The morphometric and phylogenetic basis of ornamentation, and the evolution of male display behavior, in the livebearer genus Poecilia. | Evolution; international journal of organic evolution | 2019 |
| 31226465 | Partitioned coalescence support reveals biases in species-tree methods and detects gene trees that determine phylogenomic conflicts. | Molecular Phylogenetics and Evolution | 2019 |
| 30674270 | Odontogenic ameloblast-associated (ODAM) is inactivated in toothless/enamelless placental mammals and toothed whales. | BMC Evolutionary Biology | 2019 |
| 31350395 | How conflict shapes evolution in poeciliid fishes. | Nature Communications | 2019 |
| 29495400 | Delimiting Coalescence Genes (C-Genes) in Phylogenomic Data Sets. | Genes | 2018 |
| 29331683 | Appropriate fossil calibrations and tree constraints uphold the Mesozoic divergence of solenodons from other extant mammals. | Molecular Phylogenetics and Evolution | 2018 |
| 29077895 | Pinniped Diphyly and Bat Triphyly: More Homology Errors Drive Conflicts in the Mammalian Tree. | Journal of Heredity | 2018 |
| 29277542 | Evolution of the MC5R gene in placental mammals with evidence for its inactivation in multiple lineages that lack sebaceous glands. | Molecular Phylogenetics and Evolution | 2018 |
| 28193458 | Inactivation of the olfactory marker protein (OMP) gene in river dolphins and other odontocete cetaceans. | Molecular Phylogenetics and Evolution | 2017 |
| 34715726 | Resolution of a concatenation/coalescence kerfuffle: partitioned coalescence support and a robust family-level tree for Mammalia. | Cladistics | 2017 |
| 28814606 | Their loss is our gain: regressive evolution in vertebrates provides genomic models for uncovering human disease loci. | Journal of Medical Genetics | 2017 |
| 28706989 | Inactivation of thermogenic UCP1 as a historical contingency in multiple placental mammal clades. | Science advances | 2017 |
| 29078405 | Phylogenomic red flags: Homology errors and zombie lineages in the evolutionary diversification of placental mammals. | Proceedings of the National Academy of Sciences of the United States of America | 2017 |
| 27659724 | Waking the undead: Implications of a soft explosive model for the timing of placental mammal diversification. | Molecular Phylogenetics and Evolution | 2017 |
| 28278162 | The origin and biogeographic diversification of fishes in the family Poeciliidae. | PLoS ONE | 2017 |
| 27795230 | Talpid Mole Phylogeny Unites Shrew Moles and Illuminates Overlooked Cryptic Species Diversity. | Molecular Biology and Evolution | 2017 |
| 27532052 | Genomic analysis reveals hidden biodiversity within colugos, the sister group to primates. | Sci Adv | 2016 |
| 27325836 | Mammal madness: is the mammal tree of life not yet resolved? | Philosophical Transactions of the Royal Society B: Biological Sciences | 2016 |
| 26596502 | Inactivation of C4orf26 in toothless placental mammals. | Molecular Phylogenetics and Evolution | 2016 |
| 26238460 | The gene tree delusion. | Molecular Phylogenetics and Evolution | 2016 |
| 26582021 | Spectral shifts of mammalian ultraviolet-sensitive pigments (short wavelength-sensitive opsin 1) are associated with eye length and photic niche evolution. | | 2015 |
| 25631993 | Convergent evolution of alternative developmental trajectories associated with diapause in African and South American killifish. | | 2015 |
| 25540280 | Genomic evidence for rod monochromacy in sloths and armadillos suggests early subterranean history for Xenarthra. | | 2015 |
| 26050523 | Interordinal gene capture, the phylogenetic position of Steller's sea cow based on molecular and morphological data, and the macroevolutionary history of Sirenia. | Molecular Phylogenetics and Evolution | 2015 |
| 24641875 | Land plant origins and coalescence confusion. | Trends in Plant Science | 2014 |
| 25504730 | Evidence for a single loss of mineralized teeth in the common avian ancestor. | Science | 2014 |
| 25504712 | Comparative genomics reveals insights into avian genome evolution and adaptation. | Science | 2014 |
| 25043015 | The evolution of the placenta drives a shift in sexual selection in livebearing fish. | Nature | 2014 |
| 24859681 | Eyes underground: regression of visual protein networks in subterranean mammals. | Molecular Phylogenetics and Evolution | 2014 |
| 24571289 | The evolution of the sexually selected sword in Xiphophorus does not compromise aerobic locomotor performance. | Evolution; international journal of organic evolution | 2014 |
| 25152276 | Phylogenetic analysis at deep timescales: unreliable gene trees, bypassed hidden support, and the coalescence/concatalescence conundrum. | Molecular Phylogenetics and Evolution | 2014 |
| 23460702 | Concatenation versus coalescence versus "concatalescence". | Proceedings of the National Academy of Sciences of the United States of America | 2013 |