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Author Details

Magnus Palmblad
Center for Proteomics and Metabolomics, Leiden University Medical Center
1999
112
32
Emma Lundberg (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36173614compareMS2 2.0: An Improved Software for Comparing Tandem Mass Spectrometry Datasets.J Proteome Res2023
36173614compareMS2 2.0: An Improved Software for Comparing Tandem Mass Spectrometry Datasets.J Proteome Res2023
37969874The Association of Biomolecular Resource Facilities Proteome Informatics Research Group Study on Metaproteomics (iPRG-2020).J Biomol Tech2023
36693629ProteomicsML: An Online Platform for Community-Curated Data sets and Tutorials for Machine Learning in Proteomics.J Proteome Res2023
36744821Toward an Integrated Machine Learning Model of a Proteomics Experiment.J Proteome Res2023
374353912019 Association of Biomolecular Resource Facilities Multi-Laboratory Data-Independent Acquisition Proteomics Study.J Biomol Tech2023
367340952023 Special Issue on Software Tools and Resources: Accelerating Research with New and Evolving Open Source Software.J Proteome Res2023
37969874The Association of Biomolecular Resource Facilities Proteome Informatics Research Group Study on Metaproteomics (iPRG-2020).J Biomol Tech2023
374353912019 Association of Biomolecular Resource Facilities Multi-Laboratory Data-Independent Acquisition Proteomics Study.J Biomol Tech2023
36693629ProteomicsML: An Online Platform for Community-Curated Data sets and Tutorials for Machine Learning in Proteomics.J Proteome Res2023
36744821Toward an Integrated Machine Learning Model of a Proteomics Experiment.J Proteome Res2023
367340952023 Special Issue on Software Tools and Resources: Accelerating Research with New and Evolving Open Source Software.J Proteome Res2023
35119864Interpretation of the DOME Recommendations for Machine Learning in Proteomics and Metabolomics.J Proteome Res2022
36373910Want to Publish in <i>JPR</i>? This Is What You Need to Know!J Proteome Res2022
36371691Large-Scale Interlaboratory DI-FT-ICR MS Comparability Study Employing Various Systems.J Am Soc Mass Spectrom2022
36281827Semantic Annotation of Experimental Methods in Analytical Chemistry.Anal Chem2022
35868597Identification of proteome markers for drug-induced liver injury in zebrafish embryos.Toxicology2022
36193949Machine Learning in Proteomics and Metabolomics.J Proteome Res2022
35119864Interpretation of the DOME Recommendations for Machine Learning in Proteomics and Metabolomics.J Proteome Res2022
36373910Want to Publish in <i>JPR</i>? This Is What You Need to Know!J Proteome Res2022
36371691Large-Scale Interlaboratory DI-FT-ICR MS Comparability Study Employing Various Systems.J Am Soc Mass Spectrom2022
35868597Identification of proteome markers for drug-induced liver injury in zebrafish embryos.Toxicology2022
36193949Machine Learning in Proteomics and Metabolomics.J Proteome Res2022
36281827Semantic Annotation of Experimental Methods in Analytical Chemistry.Anal Chem2022
34804501Perspectives on automated composition of workflows in the life sciences.F1000Res2021
33538780mzRecal: universal MS1 recalibration in mzML using identified peptides in mzIdentML as internal calibrants.Bioinformatics2021
33904308Theoretical Considerations for Next-Generation Proteomics.J Proteome Res2021
337946452021 Special Issue on Software Tools and Resources: Finding the Right Tools for the Job.J Proteome Res2021
33720735APE in the Wild: Automated Exploration of Proteomics Workflows in the bio.tools Registry.J Proteome Res2021
34523928Rewinding the Molecular Clock: Looking at Pioneering Molecular Phylogenetics Experiments in the Light of Proteomics.J Proteome Res2021
34804501Perspectives on automated composition of workflows in the life sciences.F1000Res2021
337946452021 Special Issue on Software Tools and Resources: Finding the Right Tools for the Job.J Proteome Res2021
33904308Theoretical Considerations for Next-Generation Proteomics.J Proteome Res2021
33538780mzRecal: universal MS1 recalibration in mzML using identified peptides in mzIdentML as internal calibrants.Bioinformatics2021
33720735APE in the Wild: Automated Exploration of Proteomics Workflows in the bio.tools Registry.J Proteome Res2021
34523928Rewinding the Molecular Clock: Looking at Pioneering Molecular Phylogenetics Experiments in the Light of Proteomics.J Proteome Res2021
31624831Community curation of bioinformatics software and data resources.Brief Bioinform2020
31624831Community curation of bioinformatics software and data resources.Brief Bioinform2020
31552639Using the Object-Oriented PowerShell for Simple Proteomics Data Analysis.Methods Mol Biol2020
31552626Retention Time Prediction and Protein Identification.Methods Mol Biol2020
31552625Isotopic Distributions.Methods Mol Biol2020
33363672Semiautomated glycoproteomics data analysis workflow for maximized glycopeptide identification and reliable quantification.Beilstein J Org Chem2020
33067450A high-stringency blueprint of the human proteome.Nat Commun2020
33166149Insights from the First Phosphopeptide Challenge of the MS Resource Pillar of the HUPO Human Proteome Project.J Proteome Res2020
33166149Insights from the First Phosphopeptide Challenge of the MS Resource Pillar of the HUPO Human Proteome Project.J Proteome Res2020
33363672Semiautomated glycoproteomics data analysis workflow for maximized glycopeptide identification and reliable quantification.Beilstein J Org Chem2020
33067450A high-stringency blueprint of the human proteome.Nat Commun2020
31552639Using the Object-Oriented PowerShell for Simple Proteomics Data Analysis.Methods Mol Biol2020
31552626Retention Time Prediction and Protein Identification.Methods Mol Biol2020
31552625Isotopic Distributions.Methods Mol Biol2020
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Collaborators

Yassene Mohammed
Center for Proteomics and Metabolomics, Leiden University Medical Center
Co-authored papers 9
Michael R Hoopmann
Institute for Systems Biology
Co-authored papers 8
Veit Schw??mmle
University of Southern Denmark
Co-authored papers 8
Susan T Weintraub
University of Texas Health Science Center at San Antonio Texas78229 USA.
Co-authored papers 7
Jon Ison
Institut Francais de Bioinformatique, CNRS
Co-authored papers 5
Juan Antonio Vizca??no
EMBL-European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 4
Yasset Perez-Riverol
EMBL's European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 4
Ekaterina Mostovenko
Virginia Commonwealth University
Co-authored papers 4
Anna-Lena Lamprecht
Institute of Computer Science, University of Potsdam
Co-authored papers 4
Hans Ienasescu
Technical University of Denmark
Co-authored papers 3
Eric W Deutsch
Institute for Systems Biology
Co-authored papers 3
Samuel H Payne
Brigham Young University
Co-authored papers 3
Lennart Martens
Co-authored papers 3
Pratik D Jagtap
University of Minnesota
Co-authored papers 3
Christoph H Borchers
McGill University
Co-authored papers 2
Gilbert S Omenn
and School of Public Health, University of Michigan ann arbor
Co-authored papers 2
Herv?? M??nager
Institut Francais de Bioinformatique
Co-authored papers 2
Lydie Lane
SIB Swiss Institute of Bioinformatics and University of Geneva
Co-authored papers 2
Joshua LaBaer
Biodesign Institute, Arizona State University
Co-authored papers 2
Alan L Rockwood
Co-authored papers 2
Nuno Bandeira
University of California
Co-authored papers 2
Christopher M Overall
University of British Columbia
Co-authored papers 2
Oliver Kohlbacher
Max Planck Institute for Developmental Biology
Co-authored papers 2
Peter A C 't Hoen
Radboud University Medical Center
Co-authored papers 2
Ulrike Kusebauch
Institute for Systems Biology
Co-authored papers 2
Robert L Moritz
Institute for Systems Biology
Co-authored papers 2
Ileana M Cristea
Princeton University
Co-authored papers 2
Fernando J Corrales
National Center for Biotechnology
Co-authored papers 2
Johan T den Dunnen
Leiden University Medical Center
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Release 1.2