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Author Details

Jake Lever
University of Glasgow
2016
17
9
PMIDPaper TitleJournal TitlePublished Year
36373660CIViCdb 2022: evolution of an open-access cancer variant interpretation knowledgebase.Nucleic Acids Res2023
37572825Associating biological context with protein-protein interactions through text mining at PubMed scale.J Biomed Inform2023
35624339A community approach to the cancer-variant-interpretation bottleneck.Nat Cancer2022
34016708Analyzing the vast coronavirus literature with CoronaCentral.Proc Natl Acad Sci U S A2021
33486067Repurposing biomedical informaticians for COVID-19.J Biomed Inform2021
33737208Search and visualization of gene-drug-disease interactions for pharmacogenomics and precision medicine research using GeneDive.J Biomed Inform2021
32634869Extending TextAE for annotation of non-contiguous entities.Genomics Inform2020
31797632PGxMine: Text mining for curation of PharmGKB.Pac Symp Biocomput2020
33398279Analyzing the vast coronavirus literature with CoronaCentral.bioRxiv2020
31110280CancerMine: a literature-mined resource for drivers, oncogenes and tumor suppressors in cancer.Nat Methods2019
31796060Text-mining clinically relevant cancer biomarkers for curation into the CIViC database.Genome Med2019
31708418Identification and Analyses of Extra-Cranial and Cranial Rhabdoid Tumor Molecular Subgroups Reveal Tumors with Cytotoxic T Cell Infiltration.Cell Rep2019
31471491Comprehensive genomic profiling of glioblastoma tumors, BTICs, and xenografts reveals stability and adaptation to growth environments.Proc Natl Acad Sci U S A2019
30793157LIONS: analysis suite for detecting and quantifying transposable element initiated transcription from RNA-seq.Bioinformatics2019
29340838Text-based phenotypic profiles incorporating biochemical phenotypes of inborn errors of metabolism improve phenomics-based diagnosis.J Inherit Metab Dis2018
29028901A collaborative filtering-based approach to biomedical knowledge discovery.Bioinformatics2018
27449082Small molecule epigenetic screen identifies novel EZH2 and HDAC inhibitors that target glioblastoma brain tumor-initiating cells.Oncotarget2016
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Collaborators

Steven J M Jones
University of British Columbia
Co-authored papers 9
Russ B Altman
Stanford University
Co-authored papers 6
Malachi Griffith
Washington University
Co-authored papers 3
Cameron J Grisdale
Biodiversity Research Centre and Department of Botany, University of British Columbia
Co-authored papers 3
Martin R Jones
BC Cancer Research Centre.
Co-authored papers 3
Kilannin Krysiak
Washington University School of Medicine
Co-authored papers 3
Marco A Marra
University of British Columbia
Co-authored papers 3
Obi L Griffith
Washington University
Co-authored papers 3
Arpad M Danos
McDonnell Genome Institute, Washington University in St Louis School of Medicine
Co-authored papers 3
Jasleen K Grewal
Monash University
Co-authored papers 2
Rachel H Giles
University Medical Center Utrecht
Co-authored papers 2
Adam C Coffman
Washington University
Co-authored papers 2
Yussanne Ma
Co-authored papers 2
Jianling Ji
Children's Hospital Los Angeles
Co-authored papers 2
Kelsy C Cotto
Washington University
Co-authored papers 2
Rashmi Kanagal-Shamanna
The University of Texas MD Anderson Cancer Center
Co-authored papers 2
Deborah I Ritter
Baylor College of Medicine
Co-authored papers 2
Ronak Y Patel
Baylor College of Medicine
Co-authored papers 2
Shahil P Pema
McDonnell Genome Institute, Washington University in St Louis School of Medicine
Co-authored papers 2
Jason Walker
McDonnell Genome Institute, Washington University School of Medicine
Co-authored papers 2
Benjamin J Ainscough
McDonnell Genome Institute, Washington University in St Louis School of Medicine
Co-authored papers 2
Xinjie Xu
Mayo Clinic
Co-authored papers 2
Damian T Rieke
German Cancer Consortium and German Cancer Research Center
Co-authored papers 2
Jinghui Zhang
Changhai Hospital, Second Military Medical University
Co-authored papers 2
Lynn M Schriml
University of Maryland School of Medicine, Institute for Genome Sciences
Co-authored papers 2
Nicholas C Spies
McDonnell Genome Institute, Washington University School of Medicine
Co-authored papers 2
Lynzey Kujan
McDonnell Genome Institute, Washington University in St Louis School of Medicine
Co-authored papers 2
Erica K Barnell
McDonnell Genome Institute, Washington University School of Medicine
Co-authored papers 2
Katie M Campbell
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Peter Horak
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