Author details

Full Name

Michael Inouye

Affiliation

ORCID

Career Start Year

2002

Papers

142

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37500913	Greengenes2 unifies microbial data in a single reference tree.	Nat Biotechnol	2024
36720882	Quality control and removal of technical variation of NMR metabolic biomarker data in ~120,000 UK Biobank participants.	Sci Data	2023
36350656	The NHGRI-EBI GWAS Catalog: knowledgebase and deposition resource.	Nucleic Acids Res	2023
37814053	Age-dependent topic modeling of comorbidities in UK Biobank identifies disease subtypes with differential genetic risk.	Nat Genet	2023
36587850	The gut microbiome is a significant risk factor for future chronic lung disease.	J Allergy Clin Immunol	2023
36823371	African genomes hold the key to accurate genetic risk prediction.		2023
36580301	Sex-Specific Survival Bias and Interaction Modeling in Coronary Artery Disease Risk Prediction.		2023
37119735	Gut microbiome and atrial fibrillation-results from a large population-based study.	EBioMedicine	2023
36991119	An atlas of genetic scores to predict multi-omic traits.	Nature	2023
37532769	Direct inference and control of genetic population structure from RNA sequencing data.		2023
35139069	Known allosteric proteins have central roles in genetic disease.	PLoS Computational Biology	2022
36048760	Neurocognitive trajectory and proteomic signature of inherited risk for Alzheimer's disease.	PLoS Genet	2022
36295830	Substantial Fat Loss in Physique Competitors Is Characterized by Increased Levels of Bile Acids, Very-Long Chain Fatty Acids, and Oxylipins.	Metabolites	2022
35945198	Transferability of genetic loci and polygenic scores for cardiometabolic traits in British Pakistani and Bangladeshi individuals.	Nat Commun	2022
35369727	Phylogeny-Aware Analysis of Metagenome Community Ecology Based on Matched Reference Genomes while Bypassing Taxonomy.	mSystems	2022
35863853	New Cardiovascular Risk Assessment Techniques for Primary Prevention: JACC Review Topic of the Week.	Journal of the American College of Cardiology	2022
35361620	A plasma metabolite score of three eicosanoids predicts incident type 2 diabetes: a prospective study in three independent cohorts.	BMJ Open Diabetes Research and Care	2022
35354965	Polygenic scores in biomedical research.	Nat Rev Genet	2022
35354069	Early prediction of incident liver disease using conventional risk factors and gut-microbiome-augmented gradient boosting.	Cell Metab	2022
36446790	Genetically personalised organ-specific metabolic models in health and disease.	Nat Commun	2022
36564466	Assessing and removing the effect of unwanted technical variations in microbiome data.		2022
35143670	The Carbon Footprint of Bioinformatics.	Molecular Biology and Evolution	2022
35115689	Combined effects of host genetics and diet on human gut microbiota and incident disease in a single population cohort.	Nat Genet	2022
34949098	Prognostic Value of a Polygenic Risk Score for Coronary Heart Disease in Individuals Aged 70 Years and Older.	Circulation. Genomic and precision medicine	2022
35100347	Gut Microbiome Composition Is Predictive of Incident Type 2 Diabetes in a Population Cohort of 5,572 Finnish Adults.	Diabetes Care	2022
35072137	Machine learning optimized polygenic scores for blood cell traits identify sex-specific trajectories and genetic correlations with disease.	Cell Genom	2022
34750571	Integrative analysis of the plasma proteome and polygenic risk of cardiometabolic diseases.	Nat Metab	2021
36082306	Workshop proceedings: GWAS summary statistics standards and sharing.	Cell Genom	2021
34020448	Associations of healthy food choices with gut microbiota profiles.	Am J Clin Nutr	2021
33692568	The Polygenic Score Catalog as an open database for reproducibility and systematic evaluation.	Nat Genet	2021
33678251	The intersect of genetics, environment, and microbiota in asthma-perspectives and challenges.	Journal of Allergy and Clinical Immunology	2021
34039031	Predictive Performance of a Polygenic Risk Score for Incident Ischemic Stroke in a Healthy Older Population.	Stroke	2021
34194954	Green Algorithms: Quantifying the Carbon Footprint of Computation.	Advanced Science	2021
34142046	Loss of the long non-coding RNA OIP5-AS1 exacerbates heart failure in a sex-specific manner.	iScience	2021
34092503	A Versatile Big Data Health System for Australia: Driving Improvements in Cardiovascular Health.	Heart Lung and Circulation	2021
33444330	Polygenic risk scores in cardiovascular risk prediction: A cohort study and modelling analyses.	PLoS Med	2021
33976176	Taxonomic signatures of cause-specific mortality risk in human gut microbiome.	Nat Commun	2021
33651661	Links between gut microbiome composition and fatty liver disease in a large population sample.	Gut Microbes	2021
33091409	Developmental patterns in the nasopharyngeal microbiome during infancy are associated with asthma risk.	J Allergy Clin Immunol	2021
33397965	Deletion of Trim28 in committed adipocytes promotes obesity but preserves glucose tolerance.	Nature Communications	2021
34399584	Risk Prediction Using Polygenic Risk Scores for Prevention of Stroke and Other Cardiovascular Diseases.	Stroke	2021
34543272	Ten simple rules to make your computing more environmentally sustainable.	PLoS Comput Biol	2021
34593009	Genomic risk prediction of coronary artery disease in women with breast cancer: a prospective cohort study.	Breast Cancer Res	2021
34479875	Efficient computation of Faith's phylogenetic diversity with applications in characterizing microbiomes.	Genome Res	2021
32888494	The Polygenic and Monogenic Basis of Blood Traits and Diseases.	Cell	2020
32350262	Reference exome data for Australian Aboriginal populations to support health-based research.	Sci Data	2020
31619470	Systems biology and big data in asthma and allergy: recent discoveries and emerging challenges.	European Respiratory Journal	2020
32887683	Genomic risk scores for juvenile idiopathic arthritis and its subtypes.	Ann Rheum Dis	2020
32762905	Validation of a Genome-Wide PolygenicÂ Score for Coronary ArteryÂ Disease inÂ South Asians.	J Am Coll Cardiol	2020
32972363	GeneMates: an R package for detecting horizontal gene co-transfer between bacteria using gene-gene associations controlled for population structure.	BMC Genomics	2020