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Author Details

Francesco Strozzi
Fondazione Parco Tecnologico Padano
2009
39
20
PMIDPaper TitleJournal TitlePublished Year
35917175Low-dose IL-2 shapes a tolerogenic gut microbiota that improves autoimmunity and gut inflammation.JCI Insight2022
35917175Low-dose IL-2 shapes a tolerogenic gut microbiota that improves autoimmunity and gut inflammation.JCI Insight2022
32690973A unified catalog of 204,938 reference genomes from the human gut microbiome.Nat Biotechnol2021
33477939Fecal Microbiota Transplant from Human to Mice Gives Insights into the Role of the Gut Microbiota in Non-Alcoholic Fatty Liver Disease (NAFLD).Microorganisms2021
34056597GeneMark-HM: improving gene prediction in DNA sequences of human microbiome.NAR Genom Bioinform2021
32690973A unified catalog of 204,938 reference genomes from the human gut microbiome.Nat Biotechnol2021
34056597GeneMark-HM: improving gene prediction in DNA sequences of human microbiome.NAR Genom Bioinform2021
33477939Fecal Microbiota Transplant from Human to Mice Gives Insights into the Role of the Gut Microbiota in Non-Alcoholic Fatty Liver Disease (NAFLD).Microorganisms2021
32414140Antimicrobial Resistance Profiles of Adherent Invasive <i>Escherichia coli</i> Show Increased Resistance to β-Lactams.Antibiotics (Basel)2020
32414140Antimicrobial Resistance Profiles of Adherent Invasive <i>Escherichia coli</i> Show Increased Resistance to β-Lactams.Antibiotics (Basel)2020
31108005Exome sequences and multi-environment field trials elucidate the genetic basis of adaptation in barley.Plant J2019
31281883A heritable subset of the core rumen microbiome dictates dairy cow productivity and emissions.Sci Adv2019
31278683Scalable Workflows and Reproducible Data Analysis for Genomics.Methods Mol Biol2019
31108005Exome sequences and multi-environment field trials elucidate the genetic basis of adaptation in barley.Plant J2019
31281883A heritable subset of the core rumen microbiome dictates dairy cow productivity and emissions.Sci Adv2019
31278683Scalable Workflows and Reproducible Data Analysis for Genomics.Methods Mol Biol2019
27445200Transcriptome analysis of Pseudomonas mediterranea and P. corrugata plant pathogens during accumulation of medium-chain-length PHAs by glycerol bioconversion.N Biotechnol2017
28988040Johne's disease in cattle: an in vitro model to study early response to infection of Mycobacterium avium subsp. paratuberculosis using RNA-seq.Mol Immunol2017
29048578Genome assembly and transcriptome resource for river buffalo, Bubalus bubalis (2n = 50).Gigascience2017
27445200Transcriptome analysis of Pseudomonas mediterranea and P. corrugata plant pathogens during accumulation of medium-chain-length PHAs by glycerol bioconversion.N Biotechnol2017
28245807Erratum to: Application of meta-omics techniques to understand greenhouse gas emissions originating from ruminal metabolism.Genet Sel Evol2017
28045068Elucidating the genetic basis of an oligogenic birth defect using whole genome sequence data in a non-model organism, Bubalus bubalis.Sci Rep2017
28123698The ruminal microbiome associated with methane emissions from ruminant livestock.J Anim Sci Biotechnol2017
28109190QTL mapping and candidate genes for resistance to Fusarium ear rot and fumonisin contamination in maize.BMC Plant Biol2017
27623773Profiling bovine blastocyst microRNAs using deep sequencing.Reprod Fertil Dev2017
28093073Application of meta-omics techniques to understand greenhouse gas emissions originating from ruminal metabolism.Genet Sel Evol2017
28109190QTL mapping and candidate genes for resistance to Fusarium ear rot and fumonisin contamination in maize.BMC Plant Biol2017
28245807Erratum to: Application of meta-omics techniques to understand greenhouse gas emissions originating from ruminal metabolism.Genet Sel Evol2017
28123698The ruminal microbiome associated with methane emissions from ruminant livestock.J Anim Sci Biotechnol2017
28093073Application of meta-omics techniques to understand greenhouse gas emissions originating from ruminal metabolism.Genet Sel Evol2017
28988040Johne's disease in cattle: an in vitro model to study early response to infection of Mycobacterium avium subsp. paratuberculosis using RNA-seq.Mol Immunol2017
29048578Genome assembly and transcriptome resource for river buffalo, Bubalus bubalis (2n = 50).Gigascience2017
28045068Elucidating the genetic basis of an oligogenic birth defect using whole genome sequence data in a non-model organism, Bubalus bubalis.Sci Rep2017
27623773Profiling bovine blastocyst microRNAs using deep sequencing.Reprod Fertil Dev2017
26895470Distinct lncRNA transcriptional fingerprints characterize progressive stages of multiple myeloma.Oncotarget2016
27296299FALDO: a semantic standard for describing the location of nucleotide and protein feature annotation.J Biomed Semantics2016
26819139RNA sequencing-based analysis of the spleen transcriptome following infectious bronchitis virus infection of chickens selected for different mannose-binding lectin serum concentrations.BMC Genomics2016
26895470Distinct lncRNA transcriptional fingerprints characterize progressive stages of multiple myeloma.Oncotarget2016
27741162The Possible Innovative Use of Bifidobacterium longum W11 in Association With Rifaximin: A New Horizon for Combined Approach?J Clin Gastroenterol2016
27741162The Possible Innovative Use of Bifidobacterium longum W11 in Association With Rifaximin: A New Horizon for Combined Approach?J Clin Gastroenterol2016
27296299FALDO: a semantic standard for describing the location of nucleotide and protein feature annotation.J Biomed Semantics2016
26819139RNA sequencing-based analysis of the spleen transcriptome following infectious bronchitis virus infection of chickens selected for different mannose-binding lectin serum concentrations.BMC Genomics2016
25956229Expression of genes involved in the T cell signalling pathway in circulating immune cells of cattle 24 months following oral challenge with Bovine Amyloidotic Spongiform Encephalopathy (BASE).BMC Vet Res2015
25881165SNPchiMp v.3: integrating and standardizing single nucleotide polymorphism data for livestock species.BMC Genomics2015
25956229Expression of genes involved in the T cell signalling pathway in circulating immune cells of cattle 24 months following oral challenge with Bovine Amyloidotic Spongiform Encephalopathy (BASE).BMC Vet Res2015
25881165SNPchiMp v.3: integrating and standardizing single nucleotide polymorphism data for livestock species.BMC Genomics2015
24495517BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains.J Biomed Semantics2014
25472764Community-driven development for computational biology at Sprints, Hackathons and Codefests.BMC Bioinformatics2014
24495517BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains.J Biomed Semantics2014
24517501SNPchiMp: a database to disentangle the SNPchip jungle in bovine livestock.BMC Genomics2014
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Collaborators

Toshiaki Katayama
Database Center for Life Science
Co-authored papers 4
Raoul J P Bonnal
National Institute for Molecular Genetics "Romeo ed Enrica Invernizzi"
Co-authored papers 4
Pjotr Prins
Wageningen University & Research
Co-authored papers 4
Jan Aerts
Co-authored papers 3
Peter J A Cock
James Hutton Institute
Co-authored papers 3
Steffen M??ller
Rostock University Medical Center
Co-authored papers 2
Joachim Baran
Stanford Center for Biomedical Informatics Research, Stanford University
Co-authored papers 2
Rutger A Vos
Naturalis Biodiversity Center
Co-authored papers 2
Takatomo Fujisawa
National Institute of Genetics
Co-authored papers 2
Jerven Bolleman
carnegie mellon university - 1 rue Michel Servet CH-1 Geneva 4
Co-authored papers 2
Nicola Martinelli
Co-authored papers 2
Michel Dumontier
Institute of Data Science, Maastricht University
Co-authored papers 2
Robert Hoehndorf
King Abdullah University of Science and Technology
Co-authored papers 2
Mat???? Kala??
University of Bergen
Co-authored papers 2
Soichi Ogishima
Tohoku University Graduate School of Medicine
Co-authored papers 1
Yasunori Yamamoto
Database Center for Life Science, Joint Support-Center for Data Science Research
Co-authored papers 1
Matthew D MacManes
Co-authored papers 1
Robert Henschel
Co-authored papers 1
Nicolas Tchitchek
Sorbonne University INSERM
Co-authored papers 1
Nicolle H Packer
Co-authored papers 1
Rick Westerman
Co-authored papers 1
Richard Holland
Eagle Genomics Ltd
Co-authored papers 1
Robert M Buels
University of California berkeley
Co-authored papers 1
Matthew Brian Couger
Co-authored papers 1
Roman Valls Guimera
University of Melbourne
Co-authored papers 1
Mark Borodovsky
Georgia Institute of Technology
Co-authored papers 1
Christian M Zmasek
J. Craig Venter Institute
Co-authored papers 1
Harry Sokol
Paris Center for Microbiome Medicine
Co-authored papers 1
Manfred Grabherr
Co-authored papers 1
Thomas William
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Release 1.2