Author details

Full Name

Jesse G Meyer

Affiliation

Buck Institute for Research on Aging, Cedars-Sinai Medical Center

ORCID

Career Start Year

2012

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36822479	Ketohexokinase-C regulates global protein acetylation to decrease carnitine palmitoyltransferase 1a-mediated fatty acid oxidation.	J Hepatol	2023
37727736	Phase variable acetylation of lipooligosaccharide modifies antibody production and opsonophagocytic killing of non-typeable <i>Haemophilus influenzae</i>.	iScience	2023
36977698	Coenzyme A binding sites induce proximal acylation across protein families.	Sci Rep	2023
36959352	Global detection of human variants and isoforms by deep proteome sequencing.	Nat Biotechnol	2023
35089914	Positional SHAP (PoSHAP) for Interpretation of machine learning models trained from biological sequences.	PLoS Comput Biol	2022
35547240	Molecular and Serologic Diagnostic Technologies for SARS-CoV-2.	ArXiv	2022
36044770	Parallelization with Dual-Trap Single-Column Configuration Maximizes Throughput of Proteomic Analysis.	Anal Chem	2022
35044165	Rapid Targeted Quantitation of Protein Overexpression with Direct Infusion Shotgun Proteome Analysis (DISPA-PRM).	Anal Chem	2022
33096026	Large-Scale Multi-omic Analysis of COVID-19 Severity.	Cell Syst	2021
35475237	Deep learning neural network tools for proteomics.	Cell Rep Methods	2021
33687723	Qualitative and Quantitative Shotgun Proteomics Data Analysis from Data-Dependent Acquisition Mass Spectrometry.	Methods Mol Biol	2021
34469131	CsoDIAq Software for Direct Infusion Shotgun Proteome Analysis.	Anal Chem	2021
32743614	Large-scale Multi-omic Analysis of COVID-19 Severity.	medRxiv	2020
33230323	Quantitative shotgun proteome analysis by direct infusion.	Nat Methods	2020
33230181	SUCLA2 mutations cause global protein succinylation contributing to the pathomechanism of a hereditary mitochondrial disease.	Nat Commun	2020
30967468	Correction for Christensen et al., "Identification of Novel Protein Lysine Acetyltransferases in Escherichia coli".	mBio	2019
31659173	Proteome and Secretome Dynamics of Human Retinal Pigment Epithelium in Response to Reactive Oxygen Species.	Sci Rep	2019
31518132	Learning Drug Functions from Chemical Structures with Convolutional Neural Networks and Random Forests.	J Chem Inf Model	2019
31008411	Fast Proteome Identification and Quantification from Data-Dependent Acquisition-Tandem Mass Spectrometry (DDA MS/MS) Using Free Software Tools.	Methods Protoc	2019
31087289	High-Resolution Mass Spectrometry to Identify and Quantify Acetylation Protein Targets.	Methods Mol Biol	2019
31000437	Regulation of UCP1 and Mitochondrial Metabolism in Brown Adipose Tissue by Reversible Succinylation.	Mol Cell	2019
29453826	Protein Turnover in Aging and Longevity.	Proteomics	2018
30035354	Simultaneous Quantification of the Acetylome and Succinylome by 'One-Pot' Affinity Enrichment.	Proteomics	2018
30352934	Identification of Novel Protein Lysine Acetyltransferases in Escherichia coli.	mBio	2018
30586434	Temporal dynamics of liver mitochondrial protein acetylation and succinylation and metabolites due to high fat diet and/or excess glucose or fructose.	PLoS One	2018
29514063	The Mitochondrial Acylome Emerges: Proteomics, Regulation by Sirtuins, and Metabolic and Disease Implications.	Cell Metab	2018
29683460	Quantification of Site-specific Protein Lysine Acetylation and Succinylation Stoichiometry Using Data-independent Acquisition Mass Spectrometry.	J Vis Exp	2018
28661500	PIQED: automated identification and quantification of protein modifications from DIA-MS data.	Nat Methods	2017
28436239	Clinical applications of quantitative proteomics using targeted and untargeted data-independent acquisition techniques.	Expert Rev Proteomics	2017
29079793	Site-specific identification and quantitation of endogenous SUMO modifications under native conditions.	Nat Commun	2017
27590315	Quantification of Lysine Acetylation and Succinylation Stoichiometry in Proteins Using Mass Spectrometric Data-Independent Acquisitions (SWATH).	J Am Soc Mass Spectrom	2016
24425750	Expanding proteome coverage with orthogonal-specificity Î±-lytic proteases.	Mol Cell Proteomics	2014
30687733	<i>In Silico</i> Proteome Cleavage Reveals Iterative Digestion Strategy for High Sequence Coverage.	ISRN Comput Biol	2014
22610994	Charge state coalescence during electrospray ionization improves peptide identification by tandem mass spectrometry.	J Am Soc Mass Spectrom	2012

1 - 34 of 34

Yansheng Liu

Yale University School of Medicine

Career Start Year 2008

Number of shared co-authors 3

Nagarjuna Nagaraj

Bruker Daltonics GmbH & Co. KG

Career Start Year 2008

Number of shared co-authors 0

Richard A Scheltema

Utrecht Institute for Pharmaceutical Sciences, Utrecht University

Career Start Year 2008

Number of shared co-authors 0

John Klimek

Oregon Health & Science University

Career Start Year 2008

Number of shared co-authors 0

Michael R Hoopmann

Institute for Systems Biology

Career Start Year 2007

Number of shared co-authors 2

Ben C Collins

Queen's University of Belfast

Career Start Year 2007

Number of shared co-authors 4

Danielle L Swaney

J. David Gladstone Institutes

Career Start Year 2007

Number of shared co-authors 3

Craig D Wenger

University of Wisconsin

Career Start Year 2007

Number of shared co-authors 1

Athena A Schepmoes

Pacific Northwest National Laboratory

Career Start Year 2006

Number of shared co-authors 1

J??rgen Cox

Max-Planck Institute of Biochemistry

Career Start Year 2006

Number of shared co-authors 1

Edward L Huttlin

Harvard Medical School

Career Start Year 2006

Number of shared co-authors 0

Therese R W Clauss

Pacific Northwest National Laboratory

Career Start Year 2005

Number of shared co-authors 1

Richard D LeDuc

Northwestern University

Career Start Year 2004

Number of shared co-authors 2

Matthew E Monroe

Pacific Northwest National Laboratory

Career Start Year 2004

Number of shared co-authors 3

Patrick G A Pedrioli

Institute of Translational Medicine, Swiss Federal Institute of Technology/ETH Zurich

Career Start Year 2004

Number of shared co-authors 1

Paul M Thomas

Northwestern University

Career Start Year 2003

Number of shared co-authors 3

Ludovic Gillet

ETH Zurich

Career Start Year 2002

Number of shared co-authors 1

Marina A Gritsenko

Pacific Northwest National Laboratory

Career Start Year 2000

Number of shared co-authors 2

Nathan A Yates

University of Pittsburgh School of Medicine

Career Start Year 1996

Number of shared co-authors 1

Michael J MacCoss

University of Washington

Career Start Year 1995

Number of shared co-authors 8

Neil L Kelleher

Northwestern University

Career Start Year 1995

Number of shared co-authors 3

Si Wu

The Fourth Hospital of Hebei Medical University

Career Start Year 1995

Number of shared co-authors 2

Christoph H Borchers

McGill University

Career Start Year 1994

Number of shared co-authors 4

Albert J R Heck

Utrecht University

Career Start Year 1991

Number of shared co-authors 2

Steven P Gygi

Harvard Medical School

Career Start Year 1991

Number of shared co-authors 2

Matthias Mann

Max-Planck Institute of Biochemistry

Career Start Year 1989

Number of shared co-authors 4

David R Goodlett

University of Victoria

Career Start Year 1988

Number of shared co-authors 1

Timothy J Griffin

University of Minnesota

Career Start Year 1985

Number of shared co-authors 0

Ruedi Aebersold

Institute of Molecular Systems Biology, ETH Zurich

Career Start Year 1982

Number of shared co-authors 6

Steven A Carr

Broad Institute of MIT and Harvard

Career Start Year 1980

Number of shared co-authors 7

row(s) 1 - 30 of 30

Birgit Schilling

Buck Institute for Research on Aging

Co-authored papers 15

Eric Verdin

Buck Institute for Research on Aging

Co-authored papers 6

Bradford W Gibson

The Buck Institute for Research on Aging

Co-authored papers 6

Alan J Wolfe

Stritch School of Medicine, Loyola University Chicago

Co-authored papers 3

Elizabeth A Komives

Co-authored papers 3

Christopher B Newgard

Duke Molecular Physiology Institute

Co-authored papers 2

Scott Swanson

Co-authored papers 2

William C Nelson

Pacific Northwest National Laboratory

Co-authored papers 2

Samuel H Payne

Brigham Young University

Co-authored papers 2

Ron Stewart

Co-authored papers 2

Karl R Clauser

Co-authored papers 1

Hanno Steen

Boston Children's Hospital, USA Harvard Medical School, Harvard Medical School

Co-authored papers 1

David Manheim

Technion - Israel Institute of Technology

Co-authored papers 1

Alicia L Richards

University of Wisconsin-Madison

Co-authored papers 1

Sangtae Kim

Co-authored papers 1

Marius Walter

Buck Institute for Research on Aging

Co-authored papers 1

Anthony Gitter

University of Wisconsin

Co-authored papers 1

Halie M Rando

University of Pennsylvania

Co-authored papers 1

David A Maltby

The University of Sydney

Co-authored papers 1

Nuno Bandeira

University of California

Co-authored papers 1

Christian Brueffer

Lund University

Co-authored papers 1

Ronan Lordan

Perelman School of Medicine, University of Pennsylvania

Co-authored papers 1

Benjamin J Blencowe

University of Toronto

Co-authored papers 1

Casey S Greene

Dartmouth College Geisel School of Medicine, Princeton University, University of Colorado Anschutz Medical Campus, University of Pennsylvania Perelman School of Medicine

Co-authored papers 1

Ariel I Mundo

University of Arkansas

Co-authored papers 1

Jason W Locasale

Duke University

Co-authored papers 1

Nils Wellhausen

University of Pennsylvania

Co-authored papers 1

Alexey I Nesvizhskii

University of Michigan ann arbor