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Author Details

Pietro Li??
University of Cambridge
1994
223
38
PMIDPaper TitleJournal TitlePublished Year
36481763PSRTTCA: A new approach for improving the prediction and characterization of tumor T cell antigens using propensity score representation learning.Comput Biol Med2023
37572513Surformer: An interpretable pattern-perceptive survival transformer for cancer survival prediction from histopathology whole slide images.Comput Methods Programs Biomed2023
35576419Modular Multi-Source Prediction of Drug Side-Effects With DruGNN.IEEE/ACM Trans Comput Biol Bioinform2023
37058588MF-PCBA: Multifidelity High-Throughput Screening Benchmarks for Drug Discovery and Machine Learning.J Chem Inf Model2023
37015608Fast Multi-Contrast MRI Acquisition by Optimal Sampling of Information Complementary to Pre-Acquired MRI Contrast.IEEE Trans Med Imaging2023
37107707The Operon as a Conundrum of Gene Dynamics and Biochemical Constraints: What We Have Learned from Histidine Biosynthesis.Genes (Basel)2023
37474615Identifying healthy individuals with Alzheimer's disease neuroimaging phenotypes in the UK Biobank.Commun Med (Lond)2023
36921434HARDC : A novel ECG-based heartbeat classification method to detect arrhythmia using hierarchical attention based dual structured RNN with dilated CNN.Neural Netw2023
33471074Adversarial generation of gene expression data.Bioinformatics2022
35651661Empirical comparison and analysis of machine learning-based predictors for predicting and analyzing of thermophilic proteins.EXCLI J2022
35546347AMYPred-FRL is a novel approach for accurate prediction of amyloid proteins by using feature representation learning.Sci Rep2022
35580429A deep graph neural network architecture for modelling spatio-temporal dynamics in resting-state functional MRI data.Med Image Anal2022
35690478SAPPHIRE: A stacking-based ensemble learning framework for accurate prediction of thermophilic proteins.Comput Biol Med2022
35715261NEPTUNE: A novel computational approach for accurate and large-scale identification of tumor homing peptides.Comput Biol Med2022
36406571iAMAP-SCM: A Novel Computational Tool for Large-Scale Identification of Antimalarial Peptides Using Estimated Propensity Scores of Dipeptides.ACS Omega2022
36046193Computational prediction and interpretation of druggable proteins using a stacked ensemble-learning framework.iScience2022
36180453StackPR is a new computational approach for large-scale identification of progesterone receptor antagonists using the stacking strategy.Sci Rep2022
36172548A novel interpretable machine learning algorithm to identify optimal parameter space for cancer growth.Front Big Data2022
36351761Artificial Intelligence You Can Trust: What Matters Beyond Performance When Applying Artificial Intelligence to Renal Histopathology?J Am Soc Nephrol2022
36292218Theory and Practice of Integrating Machine Learning and Conventional Statistics in Medical Data Analysis.Diagnostics (Basel)2022
36284036Improved prediction and characterization of blood-brain barrier penetrating peptides using estimated propensity scores of dipeptides.J Comput Aided Mol Des2022
35016057Transcriptional biomarkers of response to pharmacological treatments in severe mental disorders: A systematic review.Eur Neuropsychopharmacol2022
34888618Unsupervised construction of computational graphs for gene expression data with explicit structural inductive biases.Bioinformatics2022
34883239StackDPPIV: A novel computational approach for accurate prediction of dipeptidyl peptidase IV (DPP-IV) inhibitory peptides.Methods2022
35057016SCMTHP: A New Approach for Identifying and Characterizing of Tumor-Homing Peptides Using Estimated Propensity Scores of Amino Acids.Pharmaceutics2022
35260777SCORPION is a stacking-based ensemble learning framework for accurate prediction of phage virion proteins.Sci Rep2022
35079043Early downregulation of hsa-miR-144-3p in serum from drug-naïve Parkinson's disease patients.Sci Rep2022
34864884CellVGAE: an unsupervised scRNA-seq analysis workflow with graph attention networks.Bioinformatics2022
32778874Pathogenetic profiling of COVID-19 and SARS-like viruses.Brief Bioinform2021
33902433Advantages of using graph databases to explore chromatin conformation capture experiments.BMC Bioinformatics2021
33927746Deep Learning Enables Fast and Accurate Imputation of Gene Expression.Front Genet2021
33839815Analysis of Cardio-Cerebral Crosstalk Events in an Adult Cohort from the CENTER-TBI Study.Acta Neurochir Suppl2021
34557181From Infection to Immunity: Understanding the Response to SARS-CoV2 Through <i>In-Silico</i> Modeling.Front Immunol2021
34445663iBitter-Fuse: A Novel Sequence-Based Bitter Peptide Predictor by Fusing Multi-View Features.Int J Mol Sci2021
34045472Multilayer modelling of the human transcriptome and biological mechanisms of complex diseases and traits.NPJ Syst Biol Appl2021
34103004Analysis of single-cell RNA sequencing data based on autoencoders.BMC Bioinformatics2021
34123499ML-SIM: universal reconstruction of structured illumination microscopy images using transfer learning.Biomed Opt Express2021
34150350Deep convolutional neural networks based ECG beats classification to diagnose cardiovascular conditions.Biomed Eng Lett2021
34236667Deep Learning for Protein-Protein Interaction Site Prediction.Methods Mol Biol2021
34282408Deep Graph Mapper: Seeing Graphs Through the Neural Lens.Front Big Data2021
33971668Integration and interplay of machine learning and bioinformatics approach to identify genetic interaction related to ovarian cancer chemoresistance.Brief Bioinform2021
33372148Evolution toward beta common chain receptor usage links the matrix proteins of HIV-1 and its ancestors to human erythropoietin.Proc Natl Acad Sci U S A2021
33185666Signal metrics analysis of oscillatory patterns in bacterial multi-omic networks.Bioinformatics2021
33318723How artificial intelligence and machine learning can help healthcare systems respond to COVID-19.Mach Learn2021
30452543Bioinformatics methodologies for coeliac disease and its comorbidities.Brief Bioinform2020
33733142PECLIDES Neuro: A Personalisable Clinical Decision Support System for Neurological Diseases.Front Artif Intell2020
32084166ChronoMID-Cross-modal neural networks for 3-D temporal medical imaging data.PLoS One2020
31722495XFlow: Cross-Modal Deep Neural Networks for Audiovisual Classification.IEEE Trans Neural Netw Learn Syst2020
33335183Dynamic survival prediction in intensive care units from heterogeneous time series without the need for variable selection or curation.Sci Rep2020
32834556A machine learning model to identify early stage symptoms of SARS-Cov-2 infected patients.Expert Syst Appl2020
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Collaborators

Claudio Angione
Co-authored papers 15
Luciano Milanesi
Institute of Biomedical Technologies - National Research Council of Italy
Co-authored papers 7
Nick Goldman
Co-authored papers 7
Syed Haider
Institute of Cancer Research
Co-authored papers 7
Ari Ercole
University of Cambridge
Co-authored papers 3
Ana Cvejic
Co-authored papers 3
Viet Anh Nguyen Huu
University of Cambridge
Co-authored papers 3
Sabine Bahn
Co-authored papers 3
Christopher J Penkett
National Health Service Blood and Transplant, University of Cambridge
Co-authored papers 2
Marco Viceconti
Co-authored papers 2
Simon Whelan
Co-authored papers 2
Eric R Gamazon
Vanderbilt University Medical Center
Co-authored papers 2
Michele Vendruscolo
University of Cambridge
Co-authored papers 2
Tom L Blundell
Heartand Lung Research Institute, University of Cambridge
Co-authored papers 2
Richard A I Bethlehem
University of Cambridge.
Co-authored papers 2
Nathalie C Moon
Ontario Institute for Cancer Research
Co-authored papers 1
Jianxin Wang
Ontario Institute for Cancer Research
Co-authored papers 1
Cindy Q Yao
Ontario Institute for Cancer Research
Co-authored papers 1
Manfred Kayser
Co-authored papers 1
Eduardo Eyras
Co-authored papers 1
Damian Smedley
William Harvey Research Institute, Queen Mary University of London
Co-authored papers 1
Kathryn S Lilley
University of Cambridge
Co-authored papers 1
Ernest D Laue
University of Cambridge
Co-authored papers 1
Luc Dirix
GZA Ziekenhuizen Campus Sint-Augustinus, University of Antwerp
Co-authored papers 1
Francesco Favero
Universita del Piemonte Orientale
Co-authored papers 1
Richard Baldock
Co-authored papers 1
Daniel M Staines
European Bioinformatics Institute
Co-authored papers 1
Loukas Moutsianas
Co-authored papers 1
Jayson Harshbarger
RIKEN Center for Integrative Medical Sciences
Co-authored papers 1
David T Jones
University College London
Co-authored papers 1
Release 1.2