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Author Details

Nomi L Harris
Lawrence Berkely National Laboratory, Massachusetts Institute of Technology, Princeton University
0000-0001-6315-3707
1990
62
26
PMIDPaper TitleJournal TitlePublished Year
38000386The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species.Nucleic Acids Res2024
38000386The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species.Nucleic Acids Res2024
37953324The Human Phenotype Ontology in 2024: phenotypes around the world.Nucleic Acids Res2024
37953324The Human Phenotype Ontology in 2024: phenotypes around the world.Nucleic Acids Res2024
36866529The Gene Ontology knowledgebase in 2023.Genetics2023
38076297BOSC 2023, the 24th annual Bioinformatics Open Source Conference.F1000Res2023
37076585The Ontology of Biological Attributes (OBA)-computational traits for the life sciences.Mamm Genome2023
37390046A guide to the BRAIN Initiative Cell Census Network data ecosystem.PLoS Biol2023
37196000Phenopacket-tools: Building and validating GA4GH Phenopackets.PLoS One2023
37389415KG-Hub-building and exchanging biological knowledge graphs.Bioinformatics2023
36747660The Ontology of Biological Attributes (OBA) - Computational Traits for the Life Sciences.bioRxiv2023
36693887Brain Data Standards - A method for building data-driven cell-type ontologies.Sci Data2023
36866529The Gene Ontology knowledgebase in 2023.Genetics2023
37117232Author Correction: Brain Data Standards - A method for building data-driven cell-type ontologies.Sci Data2023
38076297BOSC 2023, the 24th annual Bioinformatics Open Source Conference.F1000Res2023
37390046A guide to the BRAIN Initiative Cell Census Network data ecosystem.PLoS Biol2023
37389415KG-Hub-building and exchanging biological knowledge graphs.Bioinformatics2023
37117232Author Correction: Brain Data Standards - A method for building data-driven cell-type ontologies.Sci Data2023
37076585The Ontology of Biological Attributes (OBA)-computational traits for the life sciences.Mamm Genome2023
37196000Phenopacket-tools: Building and validating GA4GH Phenopackets.PLoS One2023
36693887Brain Data Standards - A method for building data-driven cell-type ontologies.Sci Data2023
36747660The Ontology of Biological Attributes (OBA) - Computational Traits for the Life Sciences.bioRxiv2023
36380762Post-COVID Phenotypic Manifestations are Associated with New-Onset Psychiatric Disease: Findings from the NIH N3C and RECOVER Studies.medRxiv2022
35705716The GA4GH Phenopacket schema defines a computable representation of clinical data.Nat Biotechnol2022
36093353Metformin is Associated with Reduced COVID-19 Severity in Patients with Prediabetes.medRxiv2022
35570298NSAID use and clinical outcomes in COVID-19 patients: a 38-center retrospective cohort study.Virol J2022
36208225Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies.Database (Oxford)2022
35616100A Simple Standard for Sharing Ontological Mappings (SSSOM).Database (Oxford)2022
36128559BOSC 2022: the first hybrid and 23rd annual Bioinformatics Open Source Conference.F1000Res2022
35611543Progress toward a universal biomedical data translator.Clin Transl Sci2022
36125173Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science.Clin Transl Sci2022
36400170Metformin is associated with reduced COVID-19 severity in patients with prediabetes.Diabetes Res Clin Pract2022
36380762Post-COVID Phenotypic Manifestations are Associated with New-Onset Psychiatric Disease: Findings from the NIH N3C and RECOVER Studies.medRxiv2022
35616100A Simple Standard for Sharing Ontological Mappings (SSSOM).Database (Oxford)2022
35705716The GA4GH Phenopacket schema defines a computable representation of clinical data.Nat Biotechnol2022
35611543Progress toward a universal biomedical data translator.Clin Transl Sci2022
35570298NSAID use and clinical outcomes in COVID-19 patients: a 38-center retrospective cohort study.Virol J2022
36400170Metformin is associated with reduced COVID-19 severity in patients with prediabetes.Diabetes Res Clin Pract2022
36208225Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies.Database (Oxford)2022
36128559BOSC 2022: the first hybrid and 23rd annual Bioinformatics Open Source Conference.F1000Res2022
36125173Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science.Clin Transl Sci2022
36093353Metformin is Associated with Reduced COVID-19 Severity in Patients with Prediabetes.medRxiv2022
33264411The Human Phenotype Ontology in 2021.Nucleic Acids Res2021
33907758NSAID use and clinical outcomes in COVID-19 patients: A 38-center retrospective cohort study.medRxiv2021
33196056KG-COVID-19: A Framework to Produce Customized Knowledge Graphs for COVID-19 Response.Patterns (N Y)2021
33264411The Human Phenotype Ontology in 2021.Nucleic Acids Res2021
34721839BOSC 2021, the 22nd Annual Bioinformatics Open Source Conference.F1000Res2021
34697637OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies.Database (Oxford)2021
33907758NSAID use and clinical outcomes in COVID-19 patients: A 38-center retrospective cohort study.medRxiv2021
34697637OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies.Database (Oxford)2021
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Collaborators

Christopher J Mungall
International Society for Biocuration, Lawrence Berkeley National Laboratory, University of Edinburgh, University of Edinburgh School of Biological Sciences
Co-authored papers 27
Melissa A Haendel
American Medical Informatics Association, Oregon Health and Science University, Oregon State University, University of Colorado Anschutz Medical Campus, University of North Carolina at Chapel Hill, University of Wisconsin-Madison
Co-authored papers 21
Monica C Munoz-Torres
University of Colorado Anschutz Medical Campus
Co-authored papers 19
Melissa A Haendel
Co-authored papers 19
Peter N Robinson
William Harvey Research Institute, Queen Mary University of London
Co-authored papers 16
Julie A McMurry
University of Colorado - Anschutz Medical Campus
Co-authored papers 13
Nicole Vasilevsky
Critical Path Institute
Co-authored papers 11
James P Balhoff
Renaissance Computing Institute, University of North Carolina
Co-authored papers 10
David Osumi-Sutherland
European Bioinformatics Institute
Co-authored papers 10
Suzanna E Lewis
Lawrence Berkeley National Laboratory
Co-authored papers 10
Hannah Blau
Co-authored papers 9
Tiffany J Callahan
Columbia University
Co-authored papers 9
Deepak R Unni
Lawrence Berkeley National Laboratory
Co-authored papers 8
Peter J A Cock
James Hutton Institute
Co-authored papers 8
Karsten Hokamp
Smurfit Institute of Genetics, Trinity College of Dublin
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Seth Carbon
Lawrence Berkeley National Laboratory
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Christopher J Fields
University of Illinois Urbana-Champaign
Co-authored papers 7
Christopher G Chute
Brown University, Brown University Warren Alpert Medical School, Dartmouth-Hitchcock Medical Center, Harvard School of Public Health, Johns Hopkins Medicine, Mayo Clinic Minnesota
Co-authored papers 7
Sima Misra
University of California berkeley
Co-authored papers 6
Brad A Chapman
Harvard T.H. Chan School of Public Health
Co-authored papers 6
Michael Gargano
Co-authored papers 6
Anne E Thessen
Biodiversity Information Standards, Coastal and Estuarine Research Federation, Oregon State University, Phycological Society of America, Society of Professional Consultants, The Data Detektiv, University of Colorado Anschutz Medical Campus, University of Maryland College Park, Women in the Enterprise of Science and Technology
Co-authored papers 5
Tudor Groza
Perth Children's Hospital
Co-authored papers 5
Bryan Laraway
University of Colorado Anschutz Medical Campus
Co-authored papers 5
Susan M Bello
School of Pharmacy, University of Wisconsin
Co-authored papers 5
Sebastian K??hler
Division of Emergency Medicine University of Calgary Calgary Alberta Canada.
Co-authored papers 5
Julius O B Jacobsen
William Harvey Research Institute, Queen Mary University of London
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Kent Shefchek
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Hilmar Lapp
Duke University
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Gareth Baynam
King Edward Memorial Hospital
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Release 1.2