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Author Details

Zachary A Szpiech
Pennsylvania State University
2008
27
16
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37745583Genomic consequences of isolation and inbreeding in an island dingo population.bioRxiv2024
37329885Genomes of the extinct Bachman's warbler show high divergence and no evidence of admixture with other extant Vermivora warblers.Curr Biol2023
38077089The Complete Sequence and Comparative Analysis of Ape Sex Chromosomes.bioRxiv2023
37075098A rarefaction approach for measuring population differences in rare and common variation.Genetics2023
37096877A genetic and linguistic analysis of the admixture histories of the islands of Cabo Verde.Elife2023
35404934A spatially aware likelihood test to detect sweeps from haplotype distributions.PLoS Genet2022
35646310Evolution of genes involved in the unusual genitals of the bear macaque, <i>Macaca arctoides</i>.Ecol Evol2022
34367665Application of a novel haplotype-based scan for local adaptation to study high-altitude adaptation in rhesus macaques.Evol Lett2021
30601801Correction: Human demographic history has amplified the effects of background selection across the genome.PLoS Genet2019
31543216Ancestry-Dependent Enrichment of Deleterious Homozygotes in Runs of Homozygosity.Am J Hum Genet2019
29509491Whole-Genome Sequencing of Pharmacogenetic Drug Response in Racially Diverse Children with Asthma.Am J Respir Crit Care Med2018
29912945Human demographic history has amplified the effects of background selection across the genome.PLoS Genet2018
29551419Relationship between Deleterious Variation, Genomic Autozygosity, and Disease Risk: Insights from The 1000 Genomes Project.Am J Hum Genet2018
28035032Using genotype array data to compare multi- and single-sample variant calls and improve variant call sets from deep coverage whole-genome sequencing data.Bioinformatics2017
28205676GARLIC: Genomic Autozygosity Regions Likelihood-based Inference and Classification.Bioinformatics2017
29191164Weighted likelihood inference of genomic autozygosity patterns in dense genotype data.BMC Genomics2017
28837668Prominent features of the amino acid mutation landscape in cancer.PLoS One2017
28874603Cancer-associated arginine-to-histidine mutations confer a gain in pH sensing to mutant proteins.Sci Signal2017
27768889Genetic Ancestry and Natural Selection Drive Population Differences in Immune Responses to Pathogens.Cell2016
25015648selscan: an efficient multithreaded program to perform EHH-based scans for positive selection.Mol Biol Evol2014
23746547Long runs of homozygosity are enriched for deleterious variation.Am J Hum Genet2013
24197012High-resolution network biology: connecting sequence with function.Nat Rev Genet2013
21514313On the size distribution of private microsatellite alleles.Theor Popul Biol2011
20395969Genome-wide association studies in diverse populations.Nat Rev Genet2010
20196748Comparing spatial maps of human population-genetic variation using Procrustes analysis.Stat Appl Genet Mol Biol2010
18288195Genotype, haplotype and copy-number variation in worldwide human populations.Nature2008
18779233ADZE: a rarefaction approach for counting alleles private to combinations of populations.Bioinformatics2008
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Collaborators

Ryan D Hernandez
University of California san francisco
Co-authored papers 10
Diego Garrido Ruiz
Department of Pharmaceutical Chemistry, University of California at San Francisco
Co-authored papers 2
Esteban G Burchard
University of California San Francisco (UCSF)
Co-authored papers 2
Matthew P Jacobson
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Co-authored papers 2
Diane L Barber
University of California San Francisco
Co-authored papers 2
Andrew B Singleton
National Institute on Aging
Co-authored papers 2
Fran??oise Thibaud-Nissen
National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 1
Kathleen C Barnes
Co-authored papers 1
Carlos D Bustamante
Stanford University
Co-authored papers 1
Robert B Darnell
Co-authored papers 1
Francisco M De La Vega
Stanford University School of Medicine
Co-authored papers 1
Sam S Oh
University of California san francisco
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Alice C Young
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Nevan J Krogan (CM4AI)
University of California San Francisco
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Brigham and Women's Hospital and Harvard Medical School
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Nadav Ahituv
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Sebastian Z??llner
University of Michigan ann arbor
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Benedict Paten
UC Santa Cruz Genomics Institute, University of California
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Adam M Phillippy
National Human Genome Research Institute, National Institutes of Health
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Laura Carrel
Co-authored papers 1
Daniel J Cotter
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Soojin V Yi
University of California santa barbara
Co-authored papers 1
Howard M Cann
Co-authored papers 1
Saunak Sen
University of Tennessee Health Science Center
Co-authored papers 1
Michael C Schatz
Johns Hopkins University
Co-authored papers 1
Noah Zaitlen
Co-authored papers 1
Suyash Shringarpure
23andMe Inc.
Co-authored papers 1
Margaret A Taub
Co-authored papers 1
Pui-Yan Kwok
Cardiovascular Research Institute, University of California San Francisco
Co-authored papers 1
Kai Wang
University of Pennsylvania
Co-authored papers 1
Release 1.2