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Author Details

Ferran Sanz
Hospital del Mar Medical Research Institute (IMIM), Pompeu Fabra University
1982
179
34
Timothy Clark (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36781432A continuous in silico learning strategy to identify safety liabilities in compounds used in the leather and textile industry.Arch Toxicol2023
37842337ELIXIR and Toxicology: a community in development.F1000Res2023
37316648eTRANSAFE: data science to empower translational safety assessment.Nat Rev Drug Discov2023
37037390Making in silico predictive models for toxicology FAIR.Regul Toxicol Pharmacol2023
35188630Development of In Silico Methods for Toxicity Prediction in Collaboration Between Academia and the Pharmaceutical Industry.Methods Mol Biol2022
33185649A system-level analysis of patient disease trajectories based on clinical, phenotypic and molecular similarities.Bioinformatics2021
33795014Comorbidity between Alzheimer's disease and major depression: a behavioural and transcriptomic characterization study in mice.Alzheimers Res Ther2021
33875019Flame: an open source framework for model development, hosting, and usage in production environments.J Cheminform2021
33800393The eTRANSAFE Project on Translational Safety Assessment through Integrative Knowledge Management: Achievements and Perspectives.Pharmaceuticals (Basel)2021
34529669ISOTOPE: ISOform-guided prediction of epiTOPEs in cancer.PLoS Comput Biol2021
34136095The DisGeNET cytoscape app: Exploring and visualizing disease genomics data.Comput Struct Biotechnol J2021
33435983An ensemble learning approach for modeling the systems biology of drug-induced injury.Biol Direct2021
32570516Clinical-Based and Expert Selection of Terms Related to Depression for Twitter Streaming and Language Analysis.Stud Health Technol Inform2020
33618419The Challenge of the Effective Implementation of FAIR Principles in Biomedical Research.Methods Inf Med2020
34367618The ELIXIR Human Copy Number Variations Community: building bioinformatics infrastructure for research.F1000Res2020
32075696Towards a European health research and innovation cloud (HRIC).Genome Med2020
31680165The DisGeNET knowledge platform for disease genomics: 2019 update.Nucleic Acids Res2020
33337338Evaluating Behavioral and Linguistic Changes During Drug Treatment for Depression Using Tweets in Spanish: Pairwise Comparison Study.J Med Internet Res2020
32704182Publisher Correction: GPCRmd uncovers the dynamics of the 3D-GPCRome.Nat Methods2020
30343952The BIOMEPOC Project: Personalized Biomarkers and Clinical Profiles in Chronic Obstructive Pulmonary Disease.Arch Bronconeumol (Engl Ed)2019
31250832Detecting Signs of Depression in Tweets in Spanish: Behavioral and Linguistic Analysis.J Med Internet Res2019
30851278GUILDify v2.0: A Tool to Identify Molecular Networks Underlying Human Diseases, Their Comorbidities and Their Druggable Targets.J Mol Biol2019
29155963Generating Modeling Data From Repeat-Dose Toxicity Reports.Toxicol Sci2018
30029539A Retrospective Cross-Sectional Population-Based Study on Prenatal Levels of Adherence to the Mediterranean Diet: Maternal Profile and Effects on the Newborn.Int J Environ Res Public Health2018
29934908Hepatotoxicity Prediction by Systems Biology Modeling of Disturbed Metabolic Pathways Using Gene Expression Data.Methods Mol Biol2018
29932108Proximal Pathway Enrichment Analysis for Targeting Comorbid Diseases via Network Endopharmacology.Pharmaceuticals (Basel)2018
30205360In silico models in drug development: where we are.Curr Opin Pharmacol2018
29897411comoRbidity: an R package for the systematic analysis of disease comorbidities.Bioinformatics2018
30319692Network, Transcriptomic and Genomic Features Differentiate Genes Relevant for Drug Response.Front Genet2018
30364191Development of an Infrastructure for the Prediction of Biological Endpoints in Industrial Environments. Lessons Learned at the eTOX Project.Front Pharmacol2018
29523868Identifying temporal patterns in patient disease trajectories using dynamic time warping: A population-based study.Sci Rep2018
29547274In Silico QT and APD Prolongation Assay for Early Screening of Drug-Induced Proarrhythmic Risk.J Chem Inf Model2018
28968713An automated tool for obtaining QSAR-ready series of compounds using semantic web technologies.Bioinformatics2018
27690270Hepatotoxicity prediction by systems biology modeling of disturbed metabolic pathways using gene expression data.ALTEX2017
28220900Membrane cholesterol access into a G-protein-coupled receptor.Nat Commun2017
28423789Using Electronic Health Records to Assess Depression and Cancer Comorbidities.Stud Health Technol Inform2017
29051992Adverse outcome pathways: opportunities, limitations and open questions.Arch Toxicol2017
29026211Legacy data sharing to improve drug safety assessment: the eTOX project.Nat Rev Drug Discov2017
29220439Text mining and expert curation to develop a database on psychiatric diseases and their genes.Database (Oxford)2017
28751965Four simple recommendations to encourage best practices in research software.F1000Res2017
28740175Genetic and functional characterization of disease associations explains comorbidity.Sci Rep2017
27924018DisGeNET: a comprehensive platform integrating information on human disease-associated genes and variants.Nucleic Acids Res2017
26796668Membrane omega-3 fatty acids modulate the oligomerisation kinetics of adenosine A2A and dopamine D2 receptors.Sci Rep2016
26553148Toward a unifying strategy for the structure-based prediction of toxicological endpoints.Arch Toxicol2016
27524112Discussion of "The New Role of Biomedical Informatics in the Age of Digital Medicine".Methods Inf Med2016
27153650DisGeNET-RDF: harnessing the innovative power of the Semantic Web to explore the genetic basis of diseases.Bioinformatics2016
27071899MedBioinformatics: Developing Integrative Bioinformatics Applications for Personalized Medicine.Stud Health Technol Inform2016
25531178Personalized respiratory medicine: exploring the horizon, addressing the issues. Summary of a BRN-AJRCCM workshop held in Barcelona on June 12, 2014.Am J Respir Crit Care Med2015
26250499Molecular and clinical diseasome of comorbidities in exacerbated COPD patients.Eur Respir J2015
27490391Integrative Modeling Strategies for Predicting Drug Toxicities at the eTOX Project.Mol Inform2015
  • 1 - 50 of 179

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Collaborators

Laura I Furlong
Hospital del Mar Research Institute (IMIM), Pompeu Fabra University (UPF)
Co-authored papers 43
Miguel A Mayer
Hospital del Mar Medical Research Institute
Co-authored papers 14
Alba Guti??rrez-Sacrist??n
Harvard Medical School
Co-authored papers 8
Johan van der Lei
Erasmus Medical Center
Co-authored papers 7
Montserrat Cases
Hospital del Mar Medical Research Institute (IMIM), Universitat Pompeu Fabra
Co-authored papers 7
Jan A Kors
Erasmus MC - University Medical Center Rotterdam
Co-authored papers 6
Baldo Oliva
Universitat Pompeu Fabra
Co-authored papers 6
Erik M van Mulligen
Erasmus University Medical Center
Co-authored papers 6
Victor Maojo
Universidad Politecnica de Madrid
Co-authored papers 6
Jos?? Lu??s Oliveira
University of Aveiro
Co-authored papers 5
Francois Pognan
Novartis
Co-authored papers 5
Alfonso Valencia
Josep Carreras Leukaemia Research Institute (IJC)
Co-authored papers 5
Scott Boyer
Swedish Toxicology Sciences Research Center, Karolinska Institutet
Co-authored papers 5
Paul Avillach
Harvard Medical School
Co-authored papers 4
N??ria Queralt-Rosinach
Leiden University Medical Center
Co-authored papers 4
Salvador Capella-Gutierrez
Spanish National Bioinformatics Institute (INB/ELIXIR-ES)
Co-authored papers 4
Joaquim Gea
Hospital del Mar - IMIM
Co-authored papers 4
S??ren Brunak
Novo Nordisk Foundation Center for Protein Research, University of Copenhagen
Co-authored papers 4
Niklas Blomberg
Universitat Tubingen, Institut fur Arbeitsmedizin
Co-authored papers 3
Norbert Graf
Clinical Trials Unit
Co-authored papers 3
Casimir A Kulikowski
Rutgers University
Co-authored papers 3
Narcis Fernandez-Fuentes
Institute of Biological, Aberystwyth University
Co-authored papers 3
Fernando Martin-Sanchez
Institute of Health 'Carlos III'
Co-authored papers 3
Jaume Marrugat
Co-authored papers 3
Martin Hofmann-Apitius
Co-authored papers 3
Anthony J Brookes
University of Leicester
Co-authored papers 3
Solène Grosdidier
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Peter Ghazal
UK System Immunity Research Institute, Cardiff University
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Sabine Koch
Management and Ethics, Karolinska Institutet
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Release 1.2