Author details

Full Name

Mitzi I Kuroda

Affiliation

ORCID

Career Start Year

1983

Papers

108

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37119804	Cell state-dependent chromatin targeting in NUT carcinoma.		2023
37131839	Cell state-dependent chromatin targeting in NUT carcinoma.		2023
36070387	Variant Polycomb complexes in consistent with ancient functional diversity.	Science advances	2022
34711655	Integrated loss- and gain-of-function screens define a core network governing human embryonic stem cell behavior.	Genes Dev	2021
34285087	Chemical Screen Identifies Diverse and Novel Histone Deacetylase Inhibitors as Repressors of NUT Function: Implications for NUT Carcinoma Pathogenesis and Treatment.	Mol Cancer Res	2021
31928411	Dynamic Competition of Polycomb and Trithorax in Transcriptional Programming.	Annual Review of Biochemistry	2020
30924641	Combination Targeting of the Bromodomain and Acetyltransferase Active Site of p300/CBP.	Biochemistry	2019
30530664	Sex-specific phenotypes of histone H4 point mutants establish dosage compensation as the critical function of H4K16 acetylation in .	Proceedings of the National Academy of Sciences of the United States of America	2018
30139738	Z4 Complex Member Fusions in NUT Carcinoma: Implications for a Novel Oncogenic Mechanism.	Molecular Cancer Research	2018
28064188	<i>upSET</i>, the <i>Drosophila</i> homologue of SET3, Is Required for Viability and the Proper Balance of Active and Repressive Chromatin Marks.	G3 (Bethesda)	2017
28484033	Ectopic protein interactions within BRD4-chromatin complexes drive oncogenic megadomain formation in NUT midline carcinoma.	Proceedings of the National Academy of Sciences of the United States of America	2017
29070704	Bivalent complexes of PRC1 with orthologs of BRD4 and MOZ/MORF target developmental genes in <i>Drosophila</i>.	Genes Dev	2017
27729494	Dosage Compensation in Drosophila-a Model for the Coordinate Regulation of Transcription.	Genetics	2016
26831069	Streamlined discovery of cross-linked chromatin complexes and associated histone modifications by mass spectrometry.	Proceedings of the National Academy of Sciences of the United States of America	2016
27698495	The Oncoprotein BRD4-NUT Generates Aberrant Histone Modification Patterns.	PLoS ONE	2016
26063573	Sex comb on midleg (Scm) is a functional link between PcG-repressive complexes in Drosophila.	Genes Dev	2015
25559106	BioTAP-XL: Cross-linking/Tandem Affinity Purification to Study DNA Targets, RNA, and Protein Components of Chromatin-Associated Complexes.	Current Protocols in Molecular Biology	2015
25934013	Dosage compensation in Drosophila.	Cold Spring Harbor perspectives in biology	2015
26940990	Correspondence of Drosophila polycomb group proteins with broad H3K27me3 silent domains.	Fly (Austin)	2015
26220994	The oncogenic BRD4-NUT chromatin regulator drives aberrant transcription within large topological domains.	Genes and Development	2015
25164756	Comparative analysis of metazoan chromatin organization.	Nature	2014
24500429	Transcriptional control of a whole chromosome: emerging models for dosage compensation.	Nat Struct Mol Biol	2014
24550272	Reciprocal interactions of human C10orf12 and C17orf96 with PRC2 revealed by BioTAP-XL cross-linking and affinity purification.	Proceedings of the National Academy of Sciences of the United States of America	2014
24990964	Heterochromatin-associated interactions of Drosophila HP1a with dADD1, HIPP1, and repetitive RNAs.	Genes Dev	2014
24671948	Are we there yet? Initial targeting of the Male-Specific Lethal and Polycomb group chromatin complexes in Drosophila.	Open Biology	2014
24598259	Impact of sequencing depth in ChIP-seq experiments.	Nucleic Acids Res	2014
23295261	Chromatin proteins captured by ChIP-mass spectrometry are linked to dosage compensation in Drosophila.	Nat Struct Mol Biol	2013
24183666	"Jump start and gain" model for dosage compensation in Drosophila based on direct sequencing of nascent transcripts.	Cell Rep	2013
23599463	Comment on "Drosophila dosage compensation involves enhanced Pol II recruitment to male X-linked promoters".	Science	2013
23630075	Conservation and de novo acquisition of dosage compensation on newly evolved sex chromosomes in Drosophila.	Genes Dev	2013
23028361	Enrichment of HP1a on Drosophila chromosome 4 genes creates an alternate chromatin structure critical for regulation in this heterochromatic domain.	PLoS Genet	2012
22844249	Identification of chromatin-associated regulators of MSL complex targeting in Drosophila dosage compensation.	PLoS Genet	2012
22570616	Sequence-specific targeting of dosage compensation in Drosophila favors an active chromatin context.	PLoS Genet	2012
22870396	A genome-wide screen identifies genes that affect somatic homolog pairing in Drosophila.	G3: Genes, Genomes, Genetics	2012
22767387	Nature and function of insulator protein binding sites in the Drosophila genome.	Genome Res	2012
22143764	The genomic binding sites of a noncoding RNA.	Proc Natl Acad Sci U S A	2011
21264350	Evidence of activity-specific, radial organization of mitotic chromosomes in Drosophila.	PLoS Biology	2011
21368835	X chromosome dosage compensation via enhanced transcriptional elongation in Drosophila.	Nature	2011
21179089	Comprehensive analysis of the chromatin landscape in Drosophila melanogaster.	Nature	2011
21177972	Plasticity in patterns of histone modifications and chromosomal proteins in Drosophila heterochromatin.	Genome Res	2011
21131980	An assessment of histone-modification antibody quality.	Nat Struct Mol Biol	2011
20663215	Quantized correlation coefficient for measuring reproducibility of ChIP-chip data.	BMC Bioinformatics	2010
21254570	[Dosage compensation in drosophila: sequence-specific initiation and sequence-independent spreading of MSL complex to the active genes on the male X chromosome].	Genetika	2010
21177974	Identification of functional elements and regulatory circuits by Drosophila modENCODE.	Science	2010
19648925	Drosophila MSL complex globally acetylates H4K16 on the male X chromosome for dosage compensation.	Nat Struct Mol Biol	2009
19363150	Drosophila dosage compensation: a complex voyage to the X chromosome.	Development (Cambridge)	2009
19797766	Long-range spreading of dosage compensation in Drosophila captures transcribed autosomal genes inserted on X.	Genes Dev	2009
18724933	A sequence motif within chromatin entry sites directs MSL establishment on the Drosophila X chromosome.	Cell	2008
19029895	The MSL3 chromodomain directs a key targeting step for dosage compensation of the Drosophila melanogaster X chromosome.	Nat Struct Mol Biol	2008
18541664	Regulation of histone H4 Lys16 acetylation by predicted alternative secondary structures in roX noncoding RNAs.	Molecular and Cellular Biology	2008