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Author Details

Folker Meyer
Institute for Artificial Intelligence, University of Duisburg-Essen
1996
118
52
PMIDPaper TitleJournal TitlePublished Year
37186231Temporal disturbance of a model stream ecosystem by high microbial diversity from treated wastewater.Microbiologyopen2023
37520539Immune responses in COVID-19 patients during breakthrough infection with SARS-CoV-2 variants Delta, Omicron-BA.1 and Omicron-BA.5.Front Immunol2023
37454854Analyzing community wastewater in sub-sewersheds for the small-scale detection of SARS-CoV-2 variants in a German metropolitan area.Sci Total Environ2023
36292203Diagnosis of Inflammatory Bowel Disease and Colorectal Cancer through Multi-View Stacked Generalization Applied on Gut Microbiome Data.Diagnostics (Basel)2022
36447206Identification of herbal teas and their compounds eliciting antiviral activity against SARS-CoV-2 in vitro.BMC Biol2022
32561801COVID-19 pandemic reveals the peril of ignoring metadata standards.Sci Data2020
29028869MG-RAST version 4-lessons learned from a decade of low-budget ultra-high-throughput metagenome analysis.Brief Bioinform2019
31703549The MG-RAST API explorer: an on-ramp for RESTful query composition.BMC Bioinformatics2019
30679363Toward unrestricted use of public genomic data.Science2019
28968781Federation in genomics pipelines: techniques and challenges.Brief Bioinform2019
29406516Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.Nat Biotechnol2018
29979671Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.Nat Biotechnol2018
29979655KBase: The United States Department of Energy Systems Biology Knowledgebase.Nat Biotechnol2018
28787424Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.Nat Biotechnol2017
28637310The metagenomic data life-cycle: standards and best practices.Gigascience2017
26791506MG-RAST, a Metagenomics Service for Analysis of Microbial Community Structure and Function.Methods Mol Biol2016
26656948The MG-RAST metagenomics database and portal in 2015.Nucleic Acids Res2016
26473721Divergent responses of viral and bacterial communities in the gut microbiome to dietary disturbances in mice.ISME J2016
27855202Identification of the Core Set of Carbon-Associated Genes in a Bioenergy Grassland Soil.PLoS One2016
26914164Spatial scale drives patterns in soil bacterial diversity.Environ Microbiol2016
25569221A RESTful API for accessing microbial community data for MG-RAST.PLoS Comput Biol2015
25944863Eco-Evolutionary Dynamics of Episomes among Ecologically Cohesive Bacterial Populations.mBio2015
24152717MIxS-BE: a MIxS extension defining a minimum information standard for sequence data from the built environment.ISME J2014
25780508Metazen - metadata capture for metagenomes.Stand Genomic Sci2014
25197446Genomic standards consortium projects.Stand Genomic Sci2014
25093819Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains.PLoS Biol2014
24606731The founding charter of the Genomic Observatories Network.Gigascience2014
24628880The complete genome sequence for putative Hâ¿¿- and S-oxidizer Candidatus Sulfuricurvum sp., assembled de novo from an aquifer-derived metagenome.Environ Microbiol2014
23924250Rapid quantification of sequence repeats to resolve the size, structure and contents of bacterial genomes.BMC Genomics2013
24451366Multiphasic analysis of the temporal development of the distal gut microbiota in patients following ileal pouch anal anastomosis.Microbiome2013
24450928Bacterial community structure and functional contributions to emergence of health or necrotizing enterocolitis in preterm infants.Microbiome2013
24060134A metagenomics portal for a democratized sequencing world.Methods Enzymol2013
22297556Structure, fluctuation and magnitude of a natural grassland soil metagenome.ISME J2012
23587224The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome.Gigascience2012
23209236Draft genome sequence of Agrobacterium albertimagni strain AOL15.J Bacteriol2012
22933773Draft genome sequence of Alcaligenes faecalis subsp. faecalis NCIB 8687 (CCUG 2071).J Bacteriol2012
23013527Functional predictions from inference and observation in sequence-based inflammatory bowel disease research.Genome Biol2012
22952955Intestinal tissues induce an SNP mutation in Pseudomonas aeruginosa that enhances its virulence: possible role in anastomotic leak.PLoS One2012
23105084Draft genome sequence of Achromobacter piechaudii strain HLE.J Bacteriol2012
22768370Report of the 13(th) Genomic Standards Consortium Meeting, Shenzhen, China, March 4-7, 2012.Stand Genomic Sci2012
22720753The M5nr: a novel non-redundant database containing protein sequences and annotations from multiple sources and associated tools.BMC Bioinformatics2012
22685393A platform-independent method for detecting errors in metagenomic sequencing data: DRISEE.PLoS Comput Biol2012
22839106Short-read reading-frame predictors are not created equal: sequence error causes loss of signal.BMC Bioinformatics2012
22587947Metagenomics - a guide from sampling to data analysis.Microb Inform Exp2012
22678395Unlocking the potential of metagenomics through replicated experimental design.Nat Biotechnol2012
22675605Conceptualizing a Genomics Software Institute (GSI).Stand Genomic Sci2012
22227326From genomics to metagenomics.Curr Opin Biotechnol2012
21107444The future of microbial metagenomics (or is ignorance bliss?).ISME J2011
22587810Predicted Relative Metabolomic Turnover (PRMT): determining metabolic turnover from a coastal marine metagenomic dataset.Microb Inform Exp2011
22180822Meeting report: the 2 annual argonne soils workshop, argonne national laboratory, chicago illinois, USA, october 6-8, 2010.Stand Genomic Sci2011
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Collaborators

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Institute for Genome Sciences, University of Maryland School of Medicine
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Argonne National Laboratory
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Max Planck Institute for Marine Microbiology
Co-authored papers 9
University of Chicago
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The Genome Center at Washington University, Washington University School of Medicine
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McLean Hospital
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