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Author Details

Gary J Olsen
University of Illinois
1980
117
66
PMIDPaper TitleJournal TitlePublished Year
36350631Introducing the Bacterial and Viral Bioinformatics Resource Center (BV-BRC): a resource combining PATRIC, IRD and ViPR.Nucleic Acids Res2023
36350631Introducing the Bacterial and Viral Bioinformatics Resource Center (BV-BRC): a resource combining PATRIC, IRD and ViPR.Nucleic Acids Res2023
31667520The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities.Nucleic Acids Res2020
31667520The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities.Nucleic Acids Res2020
28968762PATRIC as a unique resource for studying antimicrobial resistance.Brief Bioinform2019
28968762PATRIC as a unique resource for studying antimicrobial resistance.Brief Bioinform2019
30464174The essential genome of the crenarchaeal model Sulfolobus islandicus.Nat Commun2018
29979655KBase: The United States Department of Energy Systems Biology Knowledgebase.Nat Biotechnol2018
30464174The essential genome of the crenarchaeal model Sulfolobus islandicus.Nat Commun2018
29979655KBase: The United States Department of Energy Systems Biology Knowledgebase.Nat Biotechnol2018
27899627Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center.Nucleic Acids Res2017
27899627Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center.Nucleic Acids Res2017
26903996PATtyFams: Protein Families for the Microbial Genomes in the PATRIC Database.Front Microbiol2016
26903996PATtyFams: Protein Families for the Microbial Genomes in the PATRIC Database.Front Microbiol2016
25666585RASTtk: a modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes.Sci Rep2015
25666585RASTtk: a modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes.Sci Rep2015
26039056Genomic Comparison of the Closely-Related Salmonella enterica Serovars Enteritidis, Dublin and Gallinarum.PLoS One2015
26590210The repABC Plasmids with Quorum-Regulated Transfer Systems in Members of the Rhizobiales Divide into Two Structurally and Separately Evolving Groups.Genome Biol Evol2015
26590210The repABC Plasmids with Quorum-Regulated Transfer Systems in Members of the Rhizobiales Divide into Two Structurally and Separately Evolving Groups.Genome Biol Evol2015
26039056Genomic Comparison of the Closely-Related Salmonella enterica Serovars Enteritidis, Dublin and Gallinarum.PLoS One2015
24293654The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST).Nucleic Acids Res2014
28324432In search of genome annotation consistency: solid gene clusters and how to use them.3 Biotech2014
24363349Quorum-dependent mannopine-inducible conjugative transfer of an Agrobacterium opine-catabolic plasmid.J Bacteriol2014
24293654The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST).Nucleic Acids Res2014
28324432In search of genome annotation consistency: solid gene clusters and how to use them.3 Biotech2014
24363349Quorum-dependent mannopine-inducible conjugative transfer of an Agrobacterium opine-catabolic plasmid.J Bacteriol2014
23606477Genomes of the class Erysipelotrichia clarify the firmicute origin of the class Mollicutes.Int J Syst Evol Microbiol2013
23606477Genomes of the class Erysipelotrichia clarify the firmicute origin of the class Mollicutes.Int J Syst Evol Microbiol2013
23110173SEED servers: high-performance access to the SEED genomes, annotations, and metabolic models.PLoS One2012
23110173SEED servers: high-performance access to the SEED genomes, annotations, and metabolic models.PLoS One2012
20679093Characterizing the native codon usages of a genome: an axis projection approach.Mol Biol Evol2011
20679093Characterizing the native codon usages of a genome: an axis projection approach.Mol Biol Evol2011
20853395Differences between the normal vaginal bacterial community of baboons and that of humans.Am J Primatol2011
22128332Similarity of genes horizontally acquired by Escherichia coli and Salmonella enterica is evidence of a supraspecies pangenome.Proc Natl Acad Sci U S A2011
22128332Similarity of genes horizontally acquired by Escherichia coli and Salmonella enterica is evidence of a supraspecies pangenome.Proc Natl Acad Sci U S A2011
20853395Differences between the normal vaginal bacterial community of baboons and that of humans.Am J Primatol2011
20018979Modal codon usage: assessing the typical codon usage of a genome.Mol Biol Evol2010
20532250Evolution of DNA replication protein complexes in eukaryotes and Archaea.PLoS One2010
20595244Collection and processing of whole blood for transformation of peripheral blood mononuclear cells and extraction of DNA: the Type 1 Diabetes Genetics Consortium.Clin Trials2010
20018979Modal codon usage: assessing the typical codon usage of a genome.Mol Biol Evol2010
20532250Evolution of DNA replication protein complexes in eukaryotes and Archaea.PLoS One2010
20595244Collection and processing of whole blood for transformation of peripheral blood mononuclear cells and extraction of DNA: the Type 1 Diabetes Genetics Consortium.Clin Trials2010
19158255Heterogeneity of vaginal microbial communities within individuals.J Clin Microbiol2009
19359364Protein-coding gene promoters in Methanocaldococcus (Methanococcus) jannaschii.Nucleic Acids Res2009
19717546Messenger RNA processing in Methanocaldococcus (Methanococcus) jannaschii.RNA2009
19158255Heterogeneity of vaginal microbial communities within individuals.J Clin Microbiol2009
19758676Identification of recombinant human papillomavirus type 16 variants.Virology2009
19758676Identification of recombinant human papillomavirus type 16 variants.Virology2009
19717546Messenger RNA processing in Methanocaldococcus (Methanococcus) jannaschii.RNA2009
19359364Protein-coding gene promoters in Methanocaldococcus (Methanococcus) jannaschii.Nucleic Acids Res2009
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Collaborators

University of Chicago
Co-authored papers 13
University of Chicago
Co-authored papers 12
University of Chicago
Co-authored papers 11
Argonne National Laboratory
Co-authored papers 11
University of Chicago
Co-authored papers 10
Co-authored papers 9
University of Washington
Co-authored papers 9
University of Chicago
Co-authored papers 8
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University of Chicago
Co-authored papers 6
Translational Research Center, Inha University Hospital
Co-authored papers 6
University of Chicago
Co-authored papers 5
Co-authored papers 5
Hope College
Co-authored papers 5
University of Chicago
Co-authored papers 5
Co-authored papers 4
Argonne National Laboratory
Co-authored papers 4
Institute for Genome Sciences, University of Maryland School of Medicine
Co-authored papers 4
TheScripps Research Institute
Co-authored papers 4
Co-authored papers 4
Institute for Artificial Intelligence, University of Duisburg-Essen
Co-authored papers 4
Argonne National Laboratory
Co-authored papers 3
Sanford Burnham Prebys Medical Discovery Institute
Co-authored papers 3
The J. Craig Venter Institute
Co-authored papers 3
Michigan State University
Co-authored papers 3
Argonne National Laboratory
Co-authored papers 3
Co-authored papers 3
Argonne National Laboratory
Co-authored papers 3
Center for Cancer Research, National Cancer Institute, National Institutes of Health
Co-authored papers 3
USDA-ARS Laboratory at Cold Spring Harbor Laboratory
Co-authored papers 2