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Author Details

Daniel A Lim
University of California san francisco
1993
87
47
Kirsten Obernier (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37645893Deconstructing intratumoral heterogeneity through multiomic and multiscale analysis of serial sections.bioRxiv2024
36606687Biodistribution of Adeno-Associated Virus Gene Therapy Following Cerebrospinal Fluid-Directed Administration.Hum Gene Ther2023
35084939A single-cell atlas of the normal and malformed human brain vasculature.Science2022
36381608Dual genome-wide coding and lncRNA screens in neural induction of induced pluripotent stem cells.Cell Genom2022
36127134Conserved and Distinct Functions of the Autism-Related Chromatin Remodeler CHD8 in Embryonic and Adult Forebrain Neurogenesis.J Neurosci2022
35145012Endoluminal Biopsy for Molecular Profiling of Human Brain Vascular Malformations.Neurology2022
33326085Genome-Scale Perturbation of Long Noncoding RNA Expression Using CRISPR Interference.Methods Mol Biol2021
33758101miRNA-independent function of long noncoding pri-miRNA loci.Proc Natl Acad Sci U S A2021
33535219CT and MRI Image Fusion Error: An Analysis of Co-Registration Error Using Commercially Available Deep Brain Stimulation Surgical Planning Software.Stereotact Funct Neurosurg2021
34239128Distinct nuclear compartment-associated genome architecture in the developing mammalian brain.Nat Neurosci2021
33953369Long noncoding RNAs in cancer metastasis.Nat Rev Cancer2021
34259628Single-cell analysis of the ventricular-subventricular zone reveals signatures of dorsal and ventral adult neurogenesis.Elife2021
32241942Maintenance of neural stem cell positional identity by <i>mixed-lineage leukemia 1</i>.Science2020
31901251Outer Radial Glia-like Cancer Stem Cells Contribute to Heterogeneity of Glioblastoma.Cell Stem Cell2020
32968068Multiplatform genomic profiling and magnetic resonance imaging identify mechanisms underlying intratumor heterogeneity in meningioma.Nat Commun2020
32155442Prefrontal-Subthalamic Hyperdirect Pathway Modulates Movement Inhibition in Humans.Neuron2020
31112699The Long Noncoding RNA Pnky Is a Trans-acting Regulator of Cortical Development In Vivo.Dev Cell2019
29079882Forging our understanding of lncRNAs in the brain.Cell Tissue Res2018
29897414CONICS integrates scRNA-seq with DNA sequencing to map gene expression to tumor sub-clones.Bioinformatics2018
30467236Modulating the expression of long non-coding RNAs for functional studies.EMBO Rep2018
29731168Promoter of lncRNA Gene PVT1 Is a Tumor-Suppressor DNA Boundary Element.Cell2018
29793829Best practices for the use of intracerebroventricular drug delivery devices.Mol Genet Metab2018
27980086CRISPRi-based genome-scale identification of functional long noncoding RNA loci in human cells.Science2017
28368504In Reply: Thalamotomy-Like Effects from Partial Removal of a Ventral Intermediate Nucleus Deep Brain Stimulator Lead in a Patient With Essential Tremor.Neurosurgery2017
28089765Intracerebroventricular Delivery as a Safe, Long-Term Route of Drug Administration.Pediatr Neurol2017
29180952Maintenance of Positional Identity of Neural Progenitors in the Embryonic and Postnatal Telencephalon.Front Mol Neurosci2017
29217575Spatiotemporal gene expression trajectories reveal developmental hierarchies of the human cortex.Science2017
29262845Single-cell profiling of human gliomas reveals macrophage ontogeny as a basis for regional differences in macrophage activation in the tumor microenvironment.Genome Biol2017
28648897Unique Organization of the Nuclear Envelope in the Post-natal Quiescent Neural Stem Cells.Stem Cell Reports2017
27048191The Adult Ventricular-Subventricular Zone (V-SVZ) and Olfactory Bulb (OB) Neurogenesis.Cold Spring Harb Perspect Biol2016
27606338Maintenance of neural stem cell regional identity in culture.Neurogenesis (Austin)2016
27888226Single-cell sequencing maps gene expression to mutational phylogenies in PDGF- and EGF-driven gliomas.Mol Syst Biol2016
27153637SCell: integrated analysis of single-cell RNA-seq data.Bioinformatics2016
26733304Uncovering the roles of long noncoding RNAs in neural development and glioma progression.Neurosci Lett2016
27081004Single-cell analysis of long non-coding RNAs in the developing human neocortex.Genome Biol2016
26817024Merging DBS with viral vector or stem cell implantation: "hybrid" stereotactic surgery as an evolution in the surgical treatment of Parkinson's disease.Mol Ther Methods Clin Dev2016
25138755Interventional magnetic resonance imaging-guided cell transplantation into the brain with radially branched deployment.Mol Ther2015
26387477Embryonic Nkx2.1-expressing neural precursor cells contribute to the regional heterogeneity of adult V-SVZ neural stem cells.Dev Biol2015
26406371Molecular identity of human outer radial glia during cortical development.Cell2015
26243867Transcriptional and epigenetic insights from stem cells and developing tissues.Development2015
26200771Thalamotomy-Like Effects From Partial Removal of a Ventral Intermediate Nucleus Deep Brain Stimulator Lead in a Patient With Essential Tremor: Case Report.Neurosurgery2015
25800779The long noncoding RNA Pnky regulates neuronal differentiation of embryonic and postnatal neural stem cells.Cell Stem Cell2015
25521796Combining cell transplants or gene therapy with deep brain stimulation for Parkinson's disease.Mov Disord2015
24509496A review of percutaneous treatments for trigeminal neuralgia.Neurosurgery2014
25209293The Ink4a/Arf locus is a barrier to direct neuronal transdifferentiation.J Neurosci2014
25223700Adult neural stem cells stake their ground.Trends Neurosci2014
25032261Stem cell epigenetics: looking forward.Cell Stem Cell2014
25176653Activation of neuronal gene expression by the JMJD3 demethylase is required for postnatal and adult brain neurogenesis.Cell Rep2014
25112712An ingredient for the elixir of youth.Cell Res2014
24867641Distinct and separable roles for EZH2 in neurogenic astroglia.Elife2014
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Collaborators

Arturo Alvarez-Buylla
University of California san francisco
Co-authored papers 20
Siyuan John Liu
University of California San Francisco.
Co-authored papers 18
Tomasz J Nowakowski
University of California san francisco
Co-authored papers 10
Arnold R Kriegstein
University of California san francisco
Co-authored papers 10
Aaron Diaz
University of California san francisco
Co-authored papers 10
Jos?? Manuel Garc??a-Verdugo
Cavanilles Institute, University of Valencia
Co-authored papers 8
Ryan N Delgado
University of California at San Francisco
Co-authored papers 8
Philip A Starr
University of California san francisco
Co-authored papers 7
Michael C Oldham
University of California san francisco
Co-authored papers 5
Jonathan S Weissman
Whitehead Institute for Biomedical Research
Co-authored papers 5
Mitchel S Berger
University of California san francisco
Co-authored papers 5
Max A Horlbeck
Broad Institute of MIT and Harvard
Co-authored papers 5
Joseph F Costello
University of California san francisco
Co-authored papers 4
Nalin Gupta
Co-authored papers 4
Michael W McDermott
University of California san francisco
Co-authored papers 3
Edward F Chang
University of California san francisco
Co-authored papers 3
Michael R Botchan
University of California berkeley
Co-authored papers 3
Scott R VandenBerg
University of California san francisco
Co-authored papers 3
Manish K Aghi
University of California san francisco
Co-authored papers 3
Daniel He
Co-authored papers 3
Jun S Song
University of Illinois at Urbana-Champaign
Co-authored papers 2
Claudia Petritsch
Co-authored papers 2
Howard Y Chang
Center for Personal Dynamic Regulomes, Stanford University
Co-authored papers 2
Tejal A Desai
University of California San Francisco
Co-authored papers 2
James D Price
UCSF Weill Institute for Neurosciences, University of California san francisco
Co-authored papers 2
William A Weiss
University of California san francisco
Co-authored papers 2
Gabriele Bergers
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Co-authored papers 2
Joanna J Phillips
University of California san francisco
Co-authored papers 2
Benjamin Mansky
Middlebury College
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Release 1.2