Author details

Full Name

David S Moss

Affiliation

Institute of Structural and Molecular Biology, University of London

ORCID

Career Start Year

1976

Papers

H Index

Expertise

CM4AI Collaborator

Andrej Sali (CM4AI)

PMID	Paper Title	Journal Title	Published Year
33051680	flexiMAP: a regression-based method for discovering differential alternative polyadenylation events in standard RNA-seq data.	Bioinformatics	2021
32109245	Flexibility and intrinsic disorder are conserved features of hepatitis C virus E2 glycoprotein.	PLoS Comput Biol	2020
30266735	Factor VIII cross-matches to the human proteome reduce the predicted inhibitor risk in missense mutation hemophilia A.	Haematologica	2019
31201325	The pore structure of Clostridium perfringens epsilon toxin.	Nat Commun	2019
28955198	Dysregulation of Alternative Poly-adenylation as a Potential Player in Autism Spectrum Disorder.	Front Mol Neurosci	2017
28261207	Investigating Substitutions in Antibody-Antigen Complexes Using Molecular Dynamics: A Case Study with Broad-spectrum, Influenza A Antibodies.	Front Immunol	2017
25244644	A large-scale computational study of inhibitor risk in non-severe haemophilia A.	Br J Haematol	2015
25227423	N-linked glycans on influenza A H3N2 hemagglutinin constrain binding of host antibodies, but shielding is limited.	Glycobiology	2015
24187015	Evolution in the influenza A H3 stalk - a challenge for broad-spectrum vaccines?	J Gen Virol	2014
25020226	Structure of a C. perfringens enterotoxin mutant in complex with a modified Claudin-2 extracellular loop 2.	J Mol Biol	2014
24709588	Clostridium perfringens epsilon toxin mutant Y30A-Y196A as a recombinant vaccine candidate against enterotoxemia.	Vaccine	2014
24625763	Identification of a key residue for oligomerisation and pore-formation of Clostridium perfringens NetB.	Toxins (Basel)	2014
23239883	Molecular architecture and functional analysis of NetB, a pore-forming toxin from Clostridium perfringens.	J Biol Chem	2013
23504825	Clostridium perfringens epsilon toxin H149A mutant as a platform for receptor binding studies.	Protein Sci	2013
22417279	Visualisation of variable binding pockets on protein surfaces by probabilistic analysis of related structure sets.	BMC Bioinformatics	2012
21680505	Analysis of antigenically important residues in human influenza A virus in terms of B-cell epitopes.	J Virol	2011
21839091	Structure of the food-poisoning Clostridium perfringens enterotoxin reveals similarity to the aerolysin-like pore-forming toxins.	J Mol Biol	2011
20388627	A computational analysis of the antigenic properties of haemagglutinin in influenza A H3N2.	Bioinformatics	2010
20439274	ImmunoGrid: towards agent-based simulations of the human immune system at a natural scale.	Philos Trans A Math Phys Eng Sci	2010
19487206	A computational Grid framework for immunological applications.	Philos Trans A Math Phys Eng Sci	2009
19383844	ImmunoGrid, an integrative environment for large-scale simulation of the immune system for vaccine discovery, design and optimization.	Brief Bioinform	2009
19560824	Proteins accessible to immune surveillance show significant T-cell epitope depletion: Implications for vaccine design.	Mol Immunol	2009
17766153	Toward the atomistic simulation of T cell epitopes automated construction of MHC: peptide structures for free energy calculations.	J Mol Graph Model	2008
18717986	GPCRTree: online hierarchical classification of GPCR function.	BMC Res Notes	2008
18831735	Towards a lightweight generic computational grid framework for biological research.	BMC Bioinformatics	2008
18603471	Are bacterial vaccine antigens T-cell epitope depleted?	Trends Immunol	2008
17870168	Identification of the HLA-DM/HLA-DR interface.	Mol Immunol	2008
16549002	Statistical deconvolution of enthalpic energetic contributions to MHC-peptide binding affinity.	BMC Struct Biol	2006
16749919	Benchmarking pK(a) prediction.	BMC Biochem	2006
16893394	SiPep: a system for the prediction of tissue-specific minor histocompatibility antigens.	Int J Immunogenet	2006
15141032	A Fugu-Human Genome Synteny Viewer: web software for graphical display and annotation reports of synteny between Fugu genomic sequence and human genes.	Nucleic Acids Res	2004
15258571	Clostridium perfringens epsilon-toxin shows structural similarity to the pore-forming toxin aerolysin.	Nat Struct Mol Biol	2004
14568535	Clostridium absonum alpha-toxin: new insights into clostridial phospholipase C substrate binding and specificity.	J Mol Biol	2003
15208743	A novel predictive technique for the MHC class II peptide-binding interaction.	Mol Med	2003
12925785	Estimation of weights and validation: a marginal likelihood approach.	Acta Crystallogr D Biol Crystallogr	2003
12051905	Crystal structure of the C. perfringens alpha-toxin with the active site closed by a flexible loop region.	J Mol Biol	2002
12009886	The first strain of Clostridium perfringens isolated from an avian source has an alpha-toxin with divergent structural and kinetic properties.	Biochemistry	2002
11524374	The Bioinformatics Template Library--generic components for biocomputing.	Bioinformatics	2001
11334886	Tyrosine 331 and phenylalanine 334 in Clostridium perfringens alpha-toxin are essential for cytotoxic activity.	FEBS Lett	2001
10739917	Rfree and the rfree ratio. II. Calculation Of the expected values and variances of cross-validation statistics in macromolecular least-squares refinement.	Acta Crystallogr D Biol Crystallogr	2000
11111911	Opening of the active site of Clostridium perfringens alpha-toxin may be triggered by membrane binding.	Int J Med Microbiol	2000
11147832	Identification of residues in the carboxy-terminal domain of Clostridium perfringens alpha-toxin (phospholipase C) which are required for its biological activities.	Arch Biochem Biophys	2000
9761849	Rfree and the rfree ratio. I. Derivation of expected values of cross-validation residuals used in macromolecular least-squares refinement.	Acta Crystallogr D Biol Crystallogr	1998
10089527	Crystallization and preliminary X-ray diffraction studies of alpha-toxin from two different strains (NCTC8237 and CER89L43) of Clostridium perfringens.	Acta Crystallogr D Biol Crystallogr	1998
9699639	Structure of the key toxin in gas gangrene.	Nat Struct Biol	1998
9761889	Error estimates of protein structure coordinates and deviations from standard geometry by full-matrix refinement of gammaB- and betaB2-crystallin.	Acta Crystallogr D Biol Crystallogr	1998
7613869	The avian eye lens protein delta-crystallin shows a novel packing arrangement of tetramers in a supramolecular helix.	Structure	1995
7721357	An analysis of the antigen binding site of RT1.Aa suggests an allele-specific motif.	Immunogenetics	1995
7634077	The structure of avian eye lens delta-crystallin reveals a new fold for a superfamily of oligomeric enzymes.	Nat Struct Biol	1994
8140092	An algorithm for automatically generating protein topology cartoons.	Protein Eng	1994

1 - 50 of 75

Marc C Deller

Incyte Corporation

Career Start Year 2000

Number of shared co-authors 0

Daron M Standley

Osaka university

Career Start Year 1998

Number of shared co-authors 2

David F Burke

European Bioinformatics Institute (EMBL-EBI)

Career Start Year 1997

Number of shared co-authors 2

Mallur S Madhusudhan

Indian Institute of Science Education and Research Pune

Career Start Year 1996

Number of shared co-authors 1

Orly Dym

Weizmann Institute of Science

Career Start Year 1995

Number of shared co-authors 1

Zihe Rao

Nankai University

Career Start Year 1995

Number of shared co-authors 1

Gerard J Kleywegt

European Bioinformatics Institute (EMBL-EBI)

Career Start Year 1990

Number of shared co-authors 3

Wladek Minor

University of Virginia

Career Start Year 1989

Number of shared co-authors 1

Paul A Bates

The Francis Crick Institute

Career Start Year 1989

Number of shared co-authors 1

Roland L Dunbrack

Fox Chase Cancer Center

Career Start Year 1989

Number of shared co-authors 2

Steven C Almo

Albert Einstein College of Medicine

Career Start Year 1988

Number of shared co-authors 1

Miriam Eisenstein

Weizmann Institute of Science

Career Start Year 1988

Number of shared co-authors 1

Mark S Johnson

Abo Akademi University

Career Start Year 1985

Number of shared co-authors 3

Randy J Read

Cambridge Institute for Medical Research, University of Cambridge

Career Start Year 1982

Number of shared co-authors 1

Thomas C Terwilliger

Los Alamos National Laboratory

Career Start Year 1980

Number of shared co-authors 2

David I Stuart

University of Oxford

Career Start Year 1976

Number of shared co-authors 3

Michael J E Sternberg

Imperial College London

Career Start Year 1976

Number of shared co-authors 2

Martino Bolognesi

University of Milano

Career Start Year 1975

Number of shared co-authors 1

Shoshana J Wodak

VIB-VUB Center for Structural Biology

Career Start Year 1975

Number of shared co-authors 2

Ian A Wilson

The Scripps Research Institute, USA The Skaggs Institute for Chemical Biology

Career Start Year 1975

Number of shared co-authors 1

Barry Honig

Columbia University Irving Medical Center

Career Start Year 1971

Number of shared co-authors 1

Joel L Sussman

Weizmann Institute of Science

Career Start Year 1971

Number of shared co-authors 3

John Moult

Institute for Bioscience and Biotechnology Research

Career Start Year 1970

Number of shared co-authors 2

Michael Levitt

Stanford University

Career Start Year 1969

Number of shared co-authors 1

Wayne A Hendrickson

Columbia University

Career Start Year 1968

Number of shared co-authors 2

Andras Fiser

Albert Einstein College of Medicine

Career Start Year 1968

Number of shared co-authors 3

Sung-Hou Kim

University of California berkeley

Career Start Year 1967

Number of shared co-authors 1

Robert M Stroud

University of California San Francisco

Career Start Year 1965

Number of shared co-authors 1

David Eisenberg

university of california los angeles

Career Start Year 1963

Number of shared co-authors 0

Jens Meiler

Vanderbilt University

Career Start Year 1954

Number of shared co-authors 2

row(s) 1 - 30 of 30

Tom L Blundell

Heartand Lung Research Institute, University of Cambridge

Co-authored papers 7

Vladimir Brusic

Co-authored papers 3

S??ren Brunak

Novo Nordisk Foundation Center for Protein Research, University of Copenhagen

Co-authored papers 2

Mark A Williams

Harwell Science & Innovation Campus

Co-authored papers 2

Nicolas Rapin

Rigshospitalet, University of Copenhagen

Co-authored papers 2

Andrej Sali (CM4AI)

University of California San Francisco

Co-authored papers 1

Bhuvaneshwari Veerapandian

Center for Bioenergy, SASTRA Deemed University

Co-authored papers 1

T Hofmann

University of Toronto

Co-authored papers 1

Jonathan B Cooper

University College London

Co-authored papers 1

Keith Gomez

Co-authored papers 1

Angela M Gronenborn

University of Pittsburgh

Co-authored papers 1

Christine Orengo

University College London, Institute of Structural and Molecular Biology

Co-authored papers 1

Alex A Freitas

University of Kent

Co-authored papers 1

1 - 13

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