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Author Details

Marc Salit
Stanford University
1996
77
32
PMIDPaper TitleJournal TitlePublished Year
37344592Single-cell quantification of ribosome occupancy in early mouse development.Nature2023
37932026Rebuttal to Correspondence on "The Environmental Microbiology Minimum Information (EMMI) Guidelines: qPCR and dPCR Quality and Reporting for Environmental Microbiology".Environ Sci Technol2023
37059810Variant calling and benchmarking in an era of complete human genome sequences.Nat Rev Genet2023
36323792The Coronavirus Standards Working Group's roadmap for improved population testing.Nat Biotechnol2022
33474990LAMP Diagnostics at the Point-of-Care: Emerging Trends and Perspectives for the Developer Community.Expert Rev Mol Diagn2021
34504343MAQC and the era of genomic medicine.Nat Biotechnol2021
34007000One in seven pathogenic variants can be challenging to detect by NGS: an analysis of 450,000 patients with implications for clinical sensitivity and genetic test implementation.Genet Med2021
34286966The Environmental Microbiology Minimum Information (EMMI) Guidelines: qPCR and dPCR Quality and Reporting for Environmental Microbiology.Environ Sci Technol2021
33948037Testing at scale during the COVID-19 pandemic.Nat Rev Genet2021
32487205Assembly and annotation of an Ashkenazi human reference genome.Genome Biol2020
32820257The COVID-19 XPRIZE and the need for scalable, fast, and widespread testing.Nat Biotechnol2020
32699374Author Correction: A robust benchmark for detection of germline large deletions and insertions.Nat Biotechnol2020
32894756Cautionary Note on Contamination of Reagents Used for Molecular Detection of SARS-CoV-2.Clin Chem2020
32541955A robust benchmark for detection of germline large deletions and insertions.Nat Biotechnol2020
32559231A crowdsourced set of curated structural variants for the human genome.PLoS Comput Biol2020
30610921A Rigorous Interlaboratory Examination of the Need to Confirm Next-Generation Sequencing-Detected Variants with an Orthogonal Method in Clinical Genetic Testing.J Mol Diagn2019
31328753Simultaneous RNA purification and size selection using on-chip isotachophoresis with an ionic spacer.Lab Chip2019
31201313High-coverage, long-read sequencing of Han Chinese trio reference samples.Sci Data2019
30899106Author Correction: Best practices for benchmarking germline small-variant calls in human genomes.Nat Biotechnol2019
30864325CrowdVariant: a crowdsourcing approach to classify copy number variants.Pac Symp Biocomput2019
30858580Best practices for benchmarking germline small-variant calls in human genomes.Nat Biotechnol2019
30936564An open resource for accurately benchmarking small variant and reference calls.Nat Biotechnol2019
29734294Multiplexed precision genome editing with trackable genomic barcodes in yeast.Nat Biotechnol2018
29959024Determining Performance Metrics for Targeted Next-Generation Sequencing Panels Using Reference Materials.J Mol Diagn2018
30391162Unbiased Fitness Estimation of Pooled Barcode or Amplicon Sequencing Studies.Cell Syst2018
30534611A minimum information standard for reproducing bench-scale bacterial cell growth and productivity.Commun Biol2018
29554888Cell-based reference samples designed with specific differences in microRNA biomarkers.BMC Biotechnol2018
29510677Summarizing performance for genome scale measurement of miRNA: reference samples and metrics.BMC Genomics2018
27684074Toward achieving harmonization in a nano-cytotoxicity assay measurement through an interlaboratory comparison study.ALTEX2017
28334756Measurements of translation initiation from all 64 codons in E. coli.Nucleic Acids Res2017
28714986Genome-wide reconstruction of complex structural variants using read clouds.Nat Methods2017
27099173A research roadmap for next-generation sequencing informatics.Sci Transl Med2016
27271295Extensive sequencing of seven human genomes to characterize benchmark reference materials.Sci Data2016
27187075When Wavelengths Collide: Bias in Cell Abundance Measurements Due to Expressed Fluorescent Proteins.ACS Synth Biol2016
27578503Development and Characterization of Reference Materials for Genetic Testing: Focus on Public Partnerships.Ann Lab Med2016
27342544Evaluation of the External RNA Controls Consortium (ERCC) reference material using a modified Latin square design.BMC Biotechnol2016
27280683In Vivo Site-Specific Protein Tagging with Diverse Amines Using an Engineered Sortase Variant.J Am Chem Soc2016
27512518External RNA Controls Consortium Beta Version Update.J Genomics2016
27335807An international comparability study on quantification of mRNA gene expression ratios: CCQM-P103.1.Biomol Detect Quantif2016
26935931PEPR: pipelines for evaluating prokaryotic references.Anal Bioanal Chem2016
26772178svclassify: a method to establish benchmark structural variant calls.BMC Genomics2016
26932475Medical implications of technical accuracy in genome sequencing.Genome Med2016
27077050Evaluation of microbial qPCR workflows using engineered Saccharomyces cerevisiae.Biomol Detect Quantif2016
25473822Use of Cause-and-Effect Analysis to Design a High-Quality Nanocytotoxicology Assay.Chem Res Toxicol2015
26383878Using mixtures of biological samples as process controls for RNA-sequencing experiments.BMC Genomics2015
26407912Minimum information for reporting next generation sequence genotyping (MIRING): Guidelines for reporting HLA and KIR genotyping via next generation sequencing.Hum Immunol2015
26269718Achieving high-sensitivity for clinical applications using augmented exome sequencing.Genome Med2015
26286809svviz: a read viewer for validating structural variants.Bioinformatics2015
26606966Unmet needs: Research helps regulators do their jobs.Sci Transl Med2015
27135909Advancing Benchmarks for Genome Sequencing.Cell Syst2015
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Collaborators

Justin M Zook
National Institute of Standards and Technology
Co-authored papers 27
Jennifer McDaniel
National Institute of Standards and Technology
Co-authored papers 11
Nathan D Olson
National Institute of Standards and Technology
Co-authored papers 9
Christopher E Mason
Feil Family Brain and Mind Research Institute.
Co-authored papers 8
Noah Spies
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Chunlin Xiao
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Rebecca Truty
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Stephen T Sherry
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Co-authored papers 5
Arend Sidow
Co-authored papers 4
Aaron M Wenger
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Co-authored papers 4
Noah Alexander
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Paul C Boutros
University of California los angeles
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Euan A Ashley
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Mark J P Chaisson
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Russ B Altman
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Zivana Tezak
Center for Devices and Radiological Health
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George Asimenos
Co-authored papers 3
Francisco M De La Vega
Stanford University School of Medicine
Co-authored papers 3
Len Trigg
Co-authored papers 3
Birgit Funke
Partners Healthcare Center for Personalized Genetic Medicine
Co-authored papers 3
Nancy F Hansen
National Human Genome Research Institute, National Institutes of Health
Co-authored papers 2
Ken Chen
University of Texas MD Anderson Cancer Center
Co-authored papers 2
Ryan E Mills
University of Michigan Medical School ann arbor
Co-authored papers 2
Carlos D Bustamante
Stanford University
Co-authored papers 2
Camir Ricketts
Institute for Computational Biomedicine, Weill Cornell Medicine of Cornell University
Co-authored papers 2
Alexandre Rouette
Charles-Bruneau Cancer Center, Centre Hospitalier Universitaire (CHU) Sainte-Justine
Co-authored papers 2
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