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Author Details

Jingqi Wang
The University of Texas Health Science Center at Houston
2015
29
12
PMIDPaper TitleJournal TitlePublished Year
37952206AutoCriteria: a generalizable clinical trial eligibility criteria extraction system powered by large language models.J Am Med Inform Assoc2024
37664001Chemical-Protein Relation Extraction with Pre-trained Prompt Tuning.IEEE Int Conf Healthc Inform2022
35005421From Tokenization to Self-Supervision: Building a High-Performance Information Extraction System for Chemical Reactions in Patents.Front Res Metr Anal2021
33647938Extracting postmarketing adverse events from safety reports in the vaccine adverse event reporting system (VAERS) using deep learning.J Am Med Inform Assoc2021
33895839COVID-19 trial graph: a linked graph for COVID-19 clinical trials.J Am Med Inform Assoc2021
31135882A study of deep learning approaches for medication and adverse drug event extraction from clinical text.J Am Med Inform Assoc2020
32308921Relation Extraction from Clinical Narratives Using Pre-trained Language Models.AMIA Annu Symp Proc2020
32298846A study of entity-linking methods for normalizing Chinese diagnosis and procedure terms to ICD codes.J Biomed Inform2020
31265066Enhancing clinical concept extraction with contextual embeddings.J Am Med Inform Assoc2019
31438083Developing Customizable Cancer Information Extraction Modules for Pathology Reports Using CLAMP.Stud Health Technol Inform2019
29186491CLAMP - a toolkit for efficiently building customized clinical natural language processing pipelines.J Am Med Inform Assoc2018
29888086Adapting Word Embeddings from Multiple Domains to Symptom Recognition from Psychiatric Notes.AMIA Jt Summits Transl Sci Proc2018
30342682Extraction of BI-RADS findings from breast ultrasound reports in Chinese using deep learning approaches.Int J Med Inform2018
29635469Toward a normalized clinical drug knowledge base in China-applying the RxNorm model to Chinese clinical drugs.J Am Med Inform Assoc2018
29477914A novel limonin derivate modulates inflammatory response by suppressing the TLR4/NF-κB signalling pathway.Biomed Pharmacother2018
28861720Accurate Identification of Fatty Liver Disease in Data Warehouse Utilizing Natural Language Processing.Dig Dis Sci2017
28269926Semantic Role Labeling of Clinical Text: Comparing Syntactic Parsers and Features.AMIA Annu Symp Proc2017
28984210A systematic analysis of FDA-approved anticancer drugs.BMC Syst Biol2017
28699546An active learning-enabled annotation system for clinical named entity recognition.BMC Med Inform Decis Mak2017
27099701Erratum to: Extracting drug-enzyme relation from literature as evidence for drug drug interaction.J Biomed Semantics2016
27585838Leveraging syntactic and semantic graph kernels to extract pharmacokinetic drug drug interactions from biomedical literature.BMC Syst Biol2016
27016700CD-REST: a system for extracting chemical-induced disease relation in literature.Database (Oxford)2016
27087307Chemical named entity recognition in patents by domain knowledge and unsupervised feature learning.Database (Oxford)2016
26955465Extracting drug-enzyme relation from literature as evidence for drug drug interaction.J Biomed Semantics2016
25810779A comparison of conditional random fields and structured support vector machines for chemical entity recognition in biomedical literature.J Cheminform2015
26063745Domain adaptation for semantic role labeling of clinical text.J Am Med Inform Assoc2015
26958258Recognizing Disjoint Clinical Concepts in Clinical Text Using Machine Learning-based Methods.AMIA Annu Symp Proc2015
26958274Citation Sentiment Analysis in Clinical Trial Papers.AMIA Annu Symp Proc2015
26306271Integrating Multiple On-line Knowledge Bases for Disease-Lab Test Relation Extraction.AMIA Jt Summits Transl Sci Proc2015
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Collaborators

Hua Xu
Yale University
Co-authored papers 25
Yaoyun Zhang
The University of Texas School of Biomedical Informatics
Co-authored papers 16
Cui Tao
The University of Texas Health Science Center at Houston
Co-authored papers 10
Min Jiang
The University of Texas Health Science Center at Houston
Co-authored papers 7
Yonghui Wu
University of Florida
Co-authored papers 7
Jun Xu
The University of Texas Health Science Center at Houston
Co-authored papers 7
Jingcheng Du
University of Texas Health Science Center at Houston
Co-authored papers 5
Yang Xiang
The University of Texas Health Science Center at Houston
Co-authored papers 4
Qiang Wei
The University of Texas Health Science Center at Houston
Co-authored papers 4
Ergin Soysal
The University of Texas Health Science Center at Houston
Co-authored papers 4
Stephen Wu
The University of Texas Health Science Center at Houston
Co-authored papers 3
Kirk Roberts
Georgia Institute of Technology, National Library of Medicine, University of Texas Health Science Center at Houston, University of Texas at Dallas
Co-authored papers 3
Lang Li
Harbin Medical University
Co-authored papers 3
Yuqi Si
Shanghai Mental Health Center, Shanghai Jiao Tong University School of Medicine
Co-authored papers 3
Trevor Cohen
University of Washington (A.M.U., University of Washington (J.S.
Co-authored papers 2
Qingxia Chen
Vanderbilt University Medical Center
Co-authored papers 2
Firat Tiryaki
The University of Texas Health Science Center at Houston
Co-authored papers 2
Xiao Dong
The Second Affiliated Hospital, Zhejiang University School of Medicine
Co-authored papers 2
Joshua C Denny
Vanderbilt University
Co-authored papers 2
Sungrim Moon
Mayo Clinic
Co-authored papers 2
Ping Yang
Mayo Clinic
Co-authored papers 1
Zongcheng Ji
The University of Texas Health Science Center at Houston
Co-authored papers 1
Jeremy L Warner
Vanderbilt University Medical Center
Co-authored papers 1
Yukun Chen
Nanyang Technological University
Co-authored papers 1
Qing Wang
The University of Texas Health Science Center at Houston
Co-authored papers 1
Zhiheng Li
College of Materials and Chemical Engineering, Zhengzhou University of Light Industry
Co-authored papers 1
Hsing-Yi Song
University of Texas Health Science Center at Houston
Co-authored papers 1
Qi Liu
Co-authored papers 1
Qiaozhu Mei
University of Michigan ann arbor
Co-authored papers 1
Serguei Pakhomov
University of Minnesota
Co-authored papers 1
Release 1.2