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Author Details

Judit Vill??n
University of Washington
2001
99
53
Nevan J Krogan (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36315500A Python Package for the Localization of Protein Modifications in Mass Spectrometry Data.J Proteome Res2023
36315500A Python Package for the Localization of Protein Modifications in Mass Spectrometry Data.J Proteome Res2023
37845410The regulatory landscape of the yeast phosphoproteome.Nat Struct Mol Biol2023
37873463The fitness cost of spurious phosphorylation.bioRxiv2023
37776539Anticodon sequence determines the impact of mistranslating tRNA<sup>Ala</sup> variants.RNA Biol2023
37033658Analysis of networks in the dorsolateral prefrontal cortex in chronic schizophrenia: Relevance of altered immune response.Front Pharmacol2023
36778398Elamipretide Improves ADP Sensitivity in Aged Mitochondria by Increasing Uptake through the Adenine Nucleotide Translocator (ANT).bioRxiv2023
36711935Automated Enrichment of Phosphotyrosine Peptides for High-Throughput Proteomics.bioRxiv2023
37462785The mitochondrially targeted peptide elamipretide (SS-31) improves ADP sensitivity in aged mitochondria by increasing uptake through the adenine nucleotide translocator (ANT).Geroscience2023
37097255Automated Enrichment of Phosphotyrosine Peptides for High-Throughput Proteomics.J Proteome Res2023
37845410The regulatory landscape of the yeast phosphoproteome.Nat Struct Mol Biol2023
37776539Anticodon sequence determines the impact of mistranslating tRNA<sup>Ala</sup> variants.RNA Biol2023
37873463The fitness cost of spurious phosphorylation.bioRxiv2023
37097255Automated Enrichment of Phosphotyrosine Peptides for High-Throughput Proteomics.J Proteome Res2023
37033658Analysis of networks in the dorsolateral prefrontal cortex in chronic schizophrenia: Relevance of altered immune response.Front Pharmacol2023
37462785The mitochondrially targeted peptide elamipretide (SS-31) improves ADP sensitivity in aged mitochondria by increasing uptake through the adenine nucleotide translocator (ANT).Geroscience2023
36778398Elamipretide Improves ADP Sensitivity in Aged Mitochondria by Increasing Uptake through the Adenine Nucleotide Translocator (ANT).bioRxiv2023
36711935Automated Enrichment of Phosphotyrosine Peptides for High-Throughput Proteomics.bioRxiv2023
36322234Elamipretide effects on the skeletal muscle phosphoproteome in aged female mice.Geroscience2022
36306373Coisolation of Peptide Pairs for Peptide Identification and MS/MS-Based Quantification.Anal Chem2022
35587152Genetic background and mistranslation frequency determine the impact of mistranslating tRNASerUGG.G3 (Bethesda)2022
36322234Elamipretide effects on the skeletal muscle phosphoproteome in aged female mice.Geroscience2022
35776068IsobaricQuant enables cross-platform quantification, visualization, and filtering of isobarically-labeled peptides.Proteomics2022
35776068IsobaricQuant enables cross-platform quantification, visualization, and filtering of isobarically-labeled peptides.Proteomics2022
35587152Genetic background and mistranslation frequency determine the impact of mistranslating tRNASerUGG.G3 (Bethesda)2022
36306373Coisolation of Peptide Pairs for Peptide Identification and MS/MS-Based Quantification.Anal Chem2022
34140699Identification of phosphosites that alter protein thermal stability.Nat Methods2021
34232461University of Washington Nathan Shock Center: innovation to advance aging research.Geroscience2021
34140699Identification of phosphosites that alter protein thermal stability.Nat Methods2021
34252924DIAmeter: matching peptides to data-independent acquisition mass spectrometry data.Bioinformatics2021
34339852Decoding Post-Translational Modification Crosstalk With Proteomics.Mol Cell Proteomics2021
34568909The amino acid substitution affects cellular response to mistranslation.G3 (Bethesda)2021
34726901Regulating Expression of Mistranslating tRNAs by Readthrough RNA Polymerase II Transcription.ACS Synth Biol2021
34480713Elamipretide (SS-31) treatment attenuates age-associated post-translational modifications of heart proteins.Geroscience2021
34726901Regulating Expression of Mistranslating tRNAs by Readthrough RNA Polymerase II Transcription.ACS Synth Biol2021
34568909The amino acid substitution affects cellular response to mistranslation.G3 (Bethesda)2021
34480713Elamipretide (SS-31) treatment attenuates age-associated post-translational modifications of heart proteins.Geroscience2021
34252924DIAmeter: matching peptides to data-independent acquisition mass spectrometry data.Bioinformatics2021
34339852Decoding Post-Translational Modification Crosstalk With Proteomics.Mol Cell Proteomics2021
34232461University of Washington Nathan Shock Center: innovation to advance aging research.Geroscience2021
32234964Proteome and Phosphoproteome Analysis of Brown Adipocytes Reveals That RICTOR Loss Dampens Global Insulin/AKT Signaling.Mol Cell Proteomics2020
32234964Proteome and Phosphoproteome Analysis of Brown Adipocytes Reveals That RICTOR Loss Dampens Global Insulin/AKT Signaling.Mol Cell Proteomics2020
32639965Calcium-binding proteins are altered in the cerebellum in schizophrenia.PLoS One2020
32901020Author Correction: mTORC2-AKT signaling to ATP-citrate lyase drives brown adipogenesis and de novo lipogenesis.Nat Commun2020
33324011PKC downregulation upon rapamycin treatment attenuates mitochondrial disease.Nat Metab2020
33324011PKC downregulation upon rapamycin treatment attenuates mitochondrial disease.Nat Metab2020
32901020Author Correction: mTORC2-AKT signaling to ATP-citrate lyase drives brown adipogenesis and de novo lipogenesis.Nat Commun2020
32639965Calcium-binding proteins are altered in the cerebellum in schizophrenia.PLoS One2020
31363206Thesaurus: quantifying phosphopeptide positional isomers.Nat Methods2019
31885202R2-P2 rapid-robotic phosphoproteomics enables multidimensional cell signaling studies.Mol Syst Biol2019
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Collaborators

Steven P Gygi
Harvard Medical School
Co-authored papers 44
Danielle L Swaney
J. David Gladstone Institutes
Co-authored papers 9
John Rush
Cell Signaling Technology Inc.
Co-authored papers 8
Michael J MacCoss
University of Washington
Co-authored papers 7
Joshua E Elias
Addenbrooke's Hospital, University of Cambridge
Co-authored papers 5
Peter S Rabinovitch
Co-authored papers 5
Wilhelm Haas
Co-authored papers 5
Lewis C Cantley
Co-authored papers 4
Pedro Beltrao
Institute of Molecular Systems Biology, ETH Zurich
Co-authored papers 4
Ailan Guo
College of Animal Medicine, Xinjiang Agricultural University
Co-authored papers 4
Wei-Jun Qian
Co-authored papers 4
Kelsey M Haas
J. David Gladstone Institutes
Co-authored papers 4
Michael J Comb
Co-authored papers 3
J??rg B??hler
University College London
Co-authored papers 3
Su-In Lee
University of Washington
Co-authored papers 3
Nevan J Krogan (CM4AI)
University of California San Francisco
Co-authored papers 2
Elizabeth M Perez
Co-authored papers 2
Grant W Brown
University of Toronto, 1 King's College Circle
Co-authored papers 2
Bo Zhai
Co-authored papers 2
Klarisa Rikova
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Carl Anthony Blau
Center for Cancer Innovation, University of Washington
Co-authored papers 2
Charles Boone
University of Toronto
Co-authored papers 2
Jin-Peng Sun
Co-authored papers 1
Kunhong Xiao
Co-authored papers 1
Edward L Huttlin
Harvard Medical School
Co-authored papers 1
Thea A Egelhofer
Co-authored papers 1
Kevan M Shokat
University of California San Francisco
Co-authored papers 1
Avi Ma'ayan
Icahn School of Medicine at Mount Sinai
Co-authored papers 1
Judith Frydman
Stanford University
Co-authored papers 1
Eul??lia de Nadal
Universitat Pompeu Fabra
Co-authored papers 1
Release 1.2