Author details

Full Name

Jeffrey M Kidd

Affiliation

University of Michigan Medical School ann arbor

ORCID

Career Start Year

2005

Papers

H Index

Expertise

CM4AI Collaborator

Christopher Churas (CM4AI)

PMID	Paper Title	Journal Title	Published Year
36945473	Mapping the Complex Genetic Landscape of Human Neurons.	bioRxiv	2023
37582787	Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture.	Genome Biol	2023
37985666	Genomic data resources of the Brain Somatic Mosaicism Network for neuropsychiatric diseases.	Sci Data	2023
37681359	Genome-wide methylation patterns from canine nanopore assemblies.	G3 (Bethesda)	2023
35232612	Canis familiaris (Great Dane domestic dog).	Trends Genet	2022
35384697	Bimodal Expression Patterns, and Not Viral Burst Sizes, Predict the Effects of Vpr on HIV-1 Proviral Populations in Jurkat Cells.	mBio	2022
35962045	Author Correction: Comparative and demographic analysis of orang-utan genomes.	Nature	2022
35961775	Recent, full-length gene retrocopies are common in canids.	Genome Res	2022
34070911	Dog10K_Boxer_Tasha_1.0: A Long-Read Assembly of the Dog Reference Genome.	Genes (Basel)	2021
33836575	Long-read assembly of a Great Dane genome highlights the contribution of GC-rich sequence and mobile elements to canine genomes.	Proc Natl Acad Sci U S A	2021
31853540	Identification and characterization of occult human-specific LINE-1 insertions using long-read sequencing technology.	Nucleic Acids Res	2020
32013076	Rapid, Paralog-Sensitive CNV Analysis of 2457 Human Genomes Using QuicK-mer2.	Genes (Basel)	2020
32067044	TypeTE: a tool to genotype mobile element insertions from whole genome resequencing data.	Nucleic Acids Res	2020
30845962	Origin and recent expansion of an endogenous gammaretroviral lineage in domestic and wild canids.	Retrovirology	2019
31598382	Dog10K: the International Consortium of Canine Genome Sequencing.	Natl Sci Rev	2019
31630956	A Neofunctionalized X-Linked Ampliconic Gene Family Is Essential for Male Fertility and Equal Sex Ratio in Mice.	Curr Biol	2019
31095560	An ADAMTS3 missense variant is associated with Norwich Terrier upper airway syndrome.	PLoS Genet	2019
29505568	Spliced integrated retrotransposed element (SpIRE) formation in the human genome.	PLoS Biol	2018
29950181	Comparison of village dog and wolf genomes highlights the role of the neural crest in dog domestication.	BMC Biol	2018
30571798	Correction: A 32 kb Critical Region Excluding Y402H in CFH Mediates Risk for Age-Related Macular Degeneration.	PLoS One	2018
29747566	Analysis of the canid Y-chromosome phylogeny using short-read sequencing data reveals the presence of distinct haplogroups among Neolithic European dogs.	BMC Genomics	2018
28049708	Modeling Human Population Separation History Using Physically Phased Genomes.	Genetics	2017
28450582	Intersection of diverse neuronal genomes and neuropsychiatric disease: The Brain Somatic Mosaicism Network.	Science	2017
28719574	Ancient European dog genomes reveal continuity since the Early Neolithic.	Nat Commun	2017
27001843	Discovery of unfixed endogenous retrovirus insertions in diverse human populations.	Proc Natl Acad Sci U S A	2016
26671457	The Time Scale of Recombination Rate Evolution in Great Apes.	Mol Biol Evol	2016
27358426	Y-Chromosome Structural Diversity in the Bonobo and Chimpanzee Lineages.	Genome Biol Evol	2016
27287201	Resolving complex structural genomic rearrangements using a randomized approach.	Genome Biol	2016
26712023	Distance from sub-Saharan Africa predicts mutational load in diverse human genomes.	Proc Natl Acad Sci U S A	2016
25534031	Inference of gorilla demographic and selective history from whole-genome sequence data.	Mol Biol Evol	2015
26432246	An integrated map of structural variation in 2,504 human genomes.	Nature	2015
26503250	Discovery and characterization of Alu repeat sequences via precise local read assembly.	Nucleic Acids Res	2015
24708091	Exome capture from saliva produces high quality genomic and metagenomic data.	BMC Genomics	2014
25348406	The genomic landscape of polymorphic human nuclear mitochondrial insertions.	Nucleic Acids Res	2014
25121757	Transcriptome sequencing from diverse human populations reveals differentiated regulatory architecture.	PLoS Genet	2014
23908239	Sequencing Y chromosomes resolves discrepancy in time to common ancestor of males versus females.	Science	2013
24348265	Genetic recombination is targeted towards gene promoter regions in dogs.	PLoS Genet	2013
23823723	Great ape genetic diversity and population history.	Nature	2013
22398614	Detecting and annotating genetic variations using the HugeSeq pipeline.	Nat Biotechnol	2012
23959643	A tale of two haplotypes: the EDA2R/AR Intergenic region is the most divergent genomic segment between Africans and East Asians in the human genome.	Hum Biol	2012
22960214	Limited evidence for classic selective sweeps in African populations.	Genetics	2012
23040495	Population genetic inference from personal genome data: impact of ancestry and admixture on human genomic variation.	Am J Hum Genet	2012
22751100	Structural diversity and African origin of the 17q21.31 inversion polymorphism.	Nat Genet	2012
22876193	Variation of BMP3 contributes to dog breed skull diversity.	PLoS Genet	2012
21270892	Comparative and demographic analysis of orang-utan genomes.	Nature	2011
22022419	A 32 kb critical region excluding Y402H in CFH mediates risk for age-related macular degeneration.	PLoS One	2011
21685127	Gorilla genome structural variation reveals evolutionary parallelisms with chimpanzee.	Genome Res	2011
21383195	Hunter-gatherer genomic diversity suggests a southern African origin for modern humans.	Proc Natl Acad Sci U S A	2011
21293372	Mapping copy number variation by population-scale genome sequencing.	Nature	2011
21397061	Population-genetic properties of differentiated human copy-number polymorphisms.	Am J Hum Genet	2011

1 - 50 of 71

Joyce Lee

Career Start Year 2016

Number of shared co-authors 33

Fritz J Sedlazeck

Baylor College of Medicine

Career Start Year 2012

Number of shared co-authors 26

Zachary A Szpiech

Pennsylvania State University

Career Start Year 2008

Number of shared co-authors 3

Martin Kircher

Berlin Institute of Health (BIH) at Charite-Universitatsmedizin Berlin

Career Start Year 2008

Number of shared co-authors 14

Aaron R Quinlan

University of Utah

Career Start Year 2007

Number of shared co-authors 11

Chad D Huff

University of Texas M.D. Anderson Cancer Center

Career Start Year 2007

Number of shared co-authors 17

Alvaro Martinez Barrio

Uppsala University

Career Start Year 2007

Number of shared co-authors 13

Gabriel Renaud

Technical University of Denmark

Career Start Year 2006

Number of shared co-authors 7

Benjamin Vernot

Max Planck Institute for Evolutionary Anthropology

Career Start Year 2006

Number of shared co-authors 14

Eran Elhaik

Lund University

Career Start Year 2006

Number of shared co-authors 21

James G D Prendergast

The Roslin Institute, The University of Edinburgh

Career Start Year 2005

Number of shared co-authors 1

Ziad Khan

Baylor College of Medicine

Career Start Year 2005

Number of shared co-authors 37

Vikas Bansal

University of California San Diego

Career Start Year 2004

Number of shared co-authors 4

Alicia Hawes

Regeneron Pharmaceuticals Inc.

Career Start Year 2004

Number of shared co-authors 52

Joseph K Pickrell

Gencove Inc.

Career Start Year 2003

Number of shared co-authors 12

Jinchuan Xing

The State University of New Jersey

Career Start Year 2003

Number of shared co-authors 34

Erika Kvikstad

University of Oxford

Career Start Year 2002

Number of shared co-authors 13

Margaret B Morgan

Baylor College of Medicine

Career Start Year 2001

Number of shared co-authors 49

Hua Shen

Baylor College of Medicine Human Genome Sequencing Center

Career Start Year 2000

Number of shared co-authors 38

Michael A Eberle

Illumina Inc.

Career Start Year 2000

Number of shared co-authors 10

Kirsten McLay

Inivata Ltd.

Career Start Year 1999

Number of shared co-authors 36

Itsik Pe'er

Columbia University

Career Start Year 1999

Number of shared co-authors 18

Guillaume Bourque

Institute for the Advanced Study of Human Biology (ASHBi), Kyoto University

Career Start Year 1997

Number of shared co-authors 30

Philip Awadalla

Ontario Institute for Cancer Research

Career Start Year 1997

Number of shared co-authors 8

Deanna M Church

Present address: Inscripta Inc.

Career Start Year 1992

Number of shared co-authors 54

Stephen T Sherry

National Center for Biotechnology Information, National Institutes of Health

Career Start Year 1991

Number of shared co-authors 43

Gustavo Glusman

Institute for Systems Biology

Career Start Year 1988

Number of shared co-authors 22

Chris Tyler-Smith

Wellcome Sanger Institute

Career Start Year 1979

Number of shared co-authors 57

Kelly A Frazer

University of California, USA Institute for Genomic Medicine

Career Start Year 1967

Number of shared co-authors 23

Richard Durbin

University of Cambridge

Career Start Year 1964

Number of shared co-authors 64

row(s) 1 - 30 of 30

Evan E Eichler

University of Washington

Co-authored papers 29

Carlos D Bustamante

Stanford University

Co-authored papers 16

Can Alkan

Bilkent University

Co-authored papers 15

Richard K Wilson

The Ohio State University

Co-authored papers 11

Tina Graves

McDonnell Genome Institute, Washington University

Co-authored papers 10

Tomas Marques-Bonet

University of California san francisco

Co-authored papers 9

Ryan E Mills

University of Michigan Medical School ann arbor

Co-authored papers 7

Ze Cheng

University of Washington School of Medicine

Co-authored papers 7

Fereydoun Hormozdiari

University of California davis

Co-authored papers 6

Carl Baker

University of Washington School of Medicine

Co-authored papers 5

Elaine A Ostrander

National Cancer Institute

Co-authored papers 5

Michael Snyder

Stanford University

Co-authored papers 5

Robert S Fulton

McDonnell Genome Institute, Washington University School of Medicine

Co-authored papers 5

Arcadi Navarro

Barcelonabeta Brain Research Center (BBRC), Pasqual Maragall Foundation

Co-authored papers 5

Deborah A Nickerson

University of Washington

Co-authored papers 4

Oliver A Ryder

Co-authored papers 4

LaDeana W Hillier

University of Washington

Co-authored papers 4

Richard A Gibbs

Baylor College of Medicine

Co-authored papers 4

Lucinda Fulton

McDonnell Genome Institute, Washington University School of Medicine

Co-authored papers 4

Elaine R Mardis

The Ohio State University

Co-authored papers 4

Feichen Shen

Shanghai Polytechnic University

Co-authored papers 4

Miriam K Konkel

Clemson University

Co-authored papers 4

Mark A Batzer

Louisiana State University

Co-authored papers 4

Donna M Muzny

Baylor College of Medicine

Co-authored papers 4

Alexej Abyzov

Co-authored papers 4

Rajinder Kaul

Altius Institute for Biomedical Sciences

Co-authored papers 4

Mark Gerstein

Yale University

Co-authored papers 3

Santhosh Girirajan

The Huck Institutes of Life Sciences, University Park, Pennsylvania State University

Co-authored papers 3

Jonathan Sebat

University of California San Diego

Co-authored papers 3

Aakrosh Ratan

Center for Public Health Genomics, University of Virginia

Co-authored papers 3

1 - 30

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