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Author Details

Jennifer J Barb
Clinical Center, National Institutes of Health
2004
51
24
PMIDPaper TitleJournal TitlePublished Year
36638095Multi-amplicon microbiome data analysis pipelines for mixed orientation sequences using QIIME2: Assessing reference database, variable region and pre-processing bias in classification of mock bacterial community samples.PLoS One2023
37642431Geographic social vulnerability is associated with the alpha diversity of the human microbiome.mSystems2023
34985847Comparing Published Gut Microbiome Taxonomic Data Across Multinational Studies.Nurs Res2022
35659642Dietary Intakes of Patients with Alcohol Use Disorder During a 4-Week Protocol on an Inpatient Treatment Unit Found to Meet Dietary Reference Intakes for Macronutrients, but Have Variability in Energy Balance and Adequacy of Micronutrient Intake.J Acad Nutr Diet2022
36517535A lower sleep regularity index (SRI) is associated with relapse in individuals with alcohol use disorder following inpatient treatment.Sci Rep2022
36503487The role of the oral microbiome in smoking-related cardiovascular risk: a review of the literature exploring mechanisms and pathways.J Transl Med2022
36032219An exploratory study of pro-inflammatory cytokines in individuals with alcohol use disorder: MCP-1 and IL-8 associated with alcohol consumption, sleep quality, anxiety, depression, and liver biomarkers.Front Psychiatry2022
32691605The Oral and Gut Bacterial Microbiomes: Similarities, Differences, and Connections.Biol Res Nurs2021
33534943Plasma metabolomic profile associated with fatigue in cancer patients.Cancer Med2021
34880965The oral microbiome in alcohol use disorder: a longitudinal analysis during inpatient treatment.J Oral Microbiol2021
34429399Extracellular vesicle associated and soluble immune marker profiles of psychoneurological symptom clusters in men with prostate cancer: an exploratory study.Transl Psychiatry2021
34079794Steroid Hormone Biosynthesis Metabolism Is Associated With Fatigue Related to Androgen Deprivation Therapy for Prostate Cancer.Front Cell Dev Biol2021
32292401<i>TREML4</i> Promotes Inflammatory Programs in Human and Murine Macrophages and Alters Atherosclerosis Lesion Composition in the Apolipoprotein E Deficient Mouse.Front Immunol2020
34589888An exploratory analysis of extracellular vesicle-associated and soluble cytokines in cancer-related fatigue in men with prostate cancer.Brain Behav Immun Health2020
31947749Sleep Regularity Index in Patients with Alcohol Dependence: Daytime Napping and Mood Disorders as Correlates of Interest.Int J Environ Res Public Health2020
33062199Grade C molar-incisor pattern periodontitis subgingival microbial profile before and after treatment.J Oral Microbiol2020
32615913Longitudinal gut microbiome changes in alcohol use disorder are influenced by abstinence and drinking quantity.Gut Microbes2020
30919073The oral microbiome of patients undergoing treatment for severe aplastic anemia: a pilot study.Ann Hematol2019
31388665Using Machine Learning to Classify Individuals With Alcohol Use Disorder Based on Treatment Seeking Status.EClinicalMedicine2019
26829716Development of an Analysis Pipeline Characterizing Multiple Hypervariable Regions of 16S rRNA Using Mock Samples.PLoS One2016
27880916NRL-Regulated Transcriptome Dynamics of Developing Rod Photoreceptors.Cell Rep2016
25741691Subgingival microbial communities in Leukocyte Adhesion Deficiency and their relationship with local immunopathology.PLoS Pathog2015
24139908Integrated analysis of miRNA and mRNA during differentiation of human CD34+ cells delineates the regulatory roles of microRNA in hematopoiesis.Exp Hematol2014
24975946Integrative DNA, RNA, and protein evidence connects TREML4 to coronary artery calcification.Am J Hum Genet2014
24628908Identification of candidate genes involved in coronary artery calcification by transcriptome sequencing of cell lines.BMC Genomics2014
24393808RNA-sequencing of the brain transcriptome implicates dysregulation of neuroplasticity, circadian rhythms and GTPase binding in bipolar disorder.Mol Psychiatry2014
23022913Upregulation of α-synuclein during localized radiation therapy signals the association of cancer-related fatigue with the activation of inflammatory and neuroprotective pathways.Brain Behav Immun2013
23555188Genotype and tumor locus determine expression profile of pseudohypoxic pheochromocytomas and paragangliomas.Neoplasia2013
22045913Gene expression analysis of whole blood, peripheral blood mononuclear cells, and lymphoblastoid cell lines from the Framingham Heart Study.Physiol Genomics2012
23144704A characterization of the oral microbiome in allogeneic stem cell transplant patients.PLoS One2012
22747986A systematic comparison and evaluation of high density exon arrays and RNA-seq technology used to unravel the peripheral blood transcriptome of sickle cell disease.BMC Med Genomics2012
21427359Caloric restriction in leptin deficiency does not correct myocardial steatosis: failure to normalize PPAR{alpha}/PGC1{alpha} and thermogenic glycerolipid/fatty acid cycling.Physiol Genomics2011
21828245Transcriptome profiling and sequencing of differentiated human hematopoietic stem cells reveal lineage-specific expression and alternative splicing of genes.Physiol Genomics2011
21605126Cooperative and redundant signaling of leukotriene B4 and leukotriene D4 in human monocytes.Allergy2011
20360305Transcriptome analysis and molecular signature of human retinal pigment epithelium.Hum Mol Genet2010
20817775Genome-wide analysis of novel splice variants induced by topoisomerase I poisoning shows preferential occurrence in genes encoding splicing factors.Cancer Res2010
19552812Impact of animal strain on gene expression in a rat model of acute cardiac rejection.BMC Genomics2009
19956541Carbon monoxide blocks lipopolysaccharide-induced gene expression by interfering with proximal TLR4 to NF-kappaB signal transduction in human monocytes.PLoS One2009
20027300Loss-of-function mutations in Rab escort protein 1 (REP-1) affect intracellular transport in fibroblasts and monocytes of choroideremia patients.PLoS One2009
18028998Leukotriene D(4) induces gene expression in human monocytes through cysteinyl leukotriene type I receptor.J Allergy Clin Immunol2008
18467653Immune responses to Pneumocystis murina are robust in healthy mice but largely absent in CD40 ligand-deficient mice.J Leukoc Biol2008
17517660NRAS mutation causes a human autoimmune lymphoproliferative syndrome.Proc Natl Acad Sci U S A2007
17999761A unique population of effector memory lymphocytes identified by CD146 having a distinct immunophenotypic and genomic profile.BMC Immunol2007
17353439Amplified expression profiling of platelet transcriptome reveals changes in arginine metabolic pathways in patients with sickle cell disease.Circulation2007
17470513Neuropeptide Y expression in phaeochromocytomas: relative absence in tumours from patients with von Hippel-Lindau syndrome.J Endocrinol2007
16403844Gene expression profiles of peripheral blood leukocytes after endotoxin challenge in humans.Physiol Genomics2006
17102123Gene expression profiling of benign and malignant pheochromocytoma.Ann N Y Acad Sci2006
16757573Nitric oxide activation of Erk1/2 regulates the stability and translation of mRNA transcripts containing CU-rich elements.Nucleic Acids Res2006
15985639Influence of IFN-gamma on gene expression in normal human bronchial epithelial cells: modulation of IFN-gamma effects by dexamethasone.Physiol Genomics2005
16269079cGMP-independent nitric oxide signaling and regulation of the cell cycle.BMC Genomics2005
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Collaborators

and Blood Institute, National Institutes of Health
Co-authored papers 31
National Institutes of Health Clinical Center
Co-authored papers 10
Division of Geriatrics & Clinical Gerontology, National Institute on Aging
Co-authored papers 7
Louisiana State University
Co-authored papers 4
and Blood Institute, National Institutes of Health
Co-authored papers 4
Clinical Center/Critical Care Medicine Department, National Institutes of Health
Co-authored papers 4
National Human Genome Research Institute
Co-authored papers 4
Brigham and Women's Hospital, Harvard Medical School
Co-authored papers 3
Queen's University
Co-authored papers 3
CVPath Institute
Co-authored papers 3
National Human Genome Research Institute, National Institutes of Health
Co-authored papers 3
Eunice Kennedy Shriver National Institute of Child Health and Human Development
Co-authored papers 3
Co-authored papers 2
CVPath Institute
Co-authored papers 2
and Blood Institute, National Institutes of Health
Co-authored papers 2
National Human Genome Research Institute, National Institutes of Health
Co-authored papers 2
Lung and Blood Institute (NHLBI), Institutes of Health (NIH)
Co-authored papers 2
Center for Mitochondrial and Epigenomic Medicine, Children's Hospital of Philadelphia
Co-authored papers 2
Office of the Clinical Director, National Institute on Alcohol Abuse and Alcoholism.
Co-authored papers 2
and Blood Institute, National Institutes of Health
Co-authored papers 2
National Human Genome Research Institute
Co-authored papers 2
National Human Genome Research Institute, National Institutes of Health
Co-authored papers 2
University of Maryland School of Medicine
Co-authored papers 2
and Blood Institute, National Institutes of Health
Co-authored papers 2
and Blood Institute
Co-authored papers 2
The Second Hospital of Shandong University
Co-authored papers 2
National Cancer Institute
Co-authored papers 2
National Eye Institute, National Institutes of Health
Co-authored papers 2
National Cancer Institute
Co-authored papers 2
Takeda Pharmaceuticals USA
Co-authored papers 1