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Author Details

Yunyu Shi
University of Science & Technology of China
1993
159
32
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36657642Structural insights into the recognition of telomeric variant repeat TTGGGG by broad-complex, tramtrack and bric-à-brac - zinc finger protein ZBTB10.J Biol Chem2023
37013936ZBTB7A regulates primed-to-naïve transition of pluripotent stem cells via recognition of the PNT-associated sequence by zinc fingers 1-2 and recognition of γ-globin -200 gene element by zinc fingers 1-4.FEBS J2023
37302992Predicting assembly mode of membraneless organelles by a FRET-based crowding sensor.Signal Transduct Target Ther2023
36620886The recognition mode between hsRBFA and mitoribosome 12S rRNA during mitoribosomal biogenesis.Nucleic Acids Res2023
36056043Structural basis for Gemin5 decamer-mediated mRNA binding.Nat Commun2022
35512546Structural insights reveal the specific recognition of meiRNA by the Mei2 protein.J Mol Cell Biol2022
37287829Driving force of biomolecular liquid-liquid phase separation probed by nuclear magnetic resonance spectroscopy.Biophys Rep2022
35928006Protocols for protein-DNA binding analysis of a zinc finger transcription factor bound to its cognate promoter.STAR Protoc2022
36356292Two Binding Sites of SARS-CoV-2 Macrodomain 3 Probed by Oxaprozin and Meclomen.J Med Chem2022
34592153Structural basis for human ZBTB7A action at the fetal globin promoter.Cell Rep2021
33676181Structural and biochemical insights into the recognition of RNA helicase CGH-1 by CAR-1 in C. elegans.Biochem Biophys Res Commun2021
34645931Insight into the interaction between the RNA helicase CGH-1 and EDC-3 and its implications.Sci Rep2021
34750379Structural basis of the interaction between SETD2 methyltransferase and hnRNP L paralogs for governing co-transcriptional splicing.Nat Commun2021
34478557Structural recognition of the mRNA 3' UTR by PUF-8 restricts the lifespan of C. elegans.Nucleic Acids Res2021
32699013Phase separation drives decision making in cell division.J Biol Chem2020
32008746Crystal structure of Arabidopsis terminal uridylyl transferase URT1.Biochem Biophys Res Commun2020
32006324Application of NMR Spectroscopy to Determine Small RNA Structure.Methods Mol Biol2020
31791175Efficacy of intrauterine perfusion of peripheral blood mononuclear cells (PBMC) for infertile women before embryo transfer: meta-analysis.J Obstet Gynaecol2020
33127869Correction: Phase separation drives decision making in cell division.J Biol Chem2020
33035348ERH facilitates microRNA maturation through the interaction with the N-terminus of DGCR8.Nucleic Acids Res2020
32885980Conformational Selection in Ligand Recognition by the First Tudor Domain of PHF20L1.J Phys Chem Lett2020
32787337Repurposing Low-Molecular-Weight Drugs against the Main Protease of Severe Acute Respiratory Syndrome Coronavirus 2.J Phys Chem Lett2020
30407553Structural insights into a unique preference for 3' terminal guanine of mirtron in Drosophila TUTase tailor.Nucleic Acids Res2019
31653339Structural Insights into ceNAP1 Chaperoning Activity toward ceH2A-H2B.Structure2019
31557220Conformation and mechanical property of rpoS mRNA inhibitory stem studied by optical tweezers and X-ray scattering.PLoS One2019
31467406Structural insights into the recognition of γ-globin gene promoter by BCL11A.Cell Res2019
31262091NMR Fragment-Based Screening against Tandem RNA Recognition Motifs of TDP-43.Int J Mol Sci2019
31537782TRIM66 reads unmodified H3R2K4 and H3K56ac to respond to DNA damage in embryonic stem cells.Nat Commun2019
31251801Structural insights into dimethylation of 12S rRNA by TFB1M: indispensable role in translation of mitochondrial genes and mitochondrial function.Nucleic Acids Res2019
31002843Metabolic and physiological perturbations of Escherichia coli W3100 by bacterial small RNA RyhB.Biochimie2019
30963726Structural insight into the unique dsDNA binding topology of the human ORC2 wing helix domain.FEBS J2019
30629181ZBTB10 binds the telomeric variant repeat TTGGGG and interacts with TRF2.Nucleic Acids Res2019
30651569A conserved dimer interface connects ERH and YTH family proteins to promote gene silencing.Nat Commun2019
30649456Structural insights reveal the specific recognition of roX RNA by the dsRNA-binding domains of the RNA helicase MLE and its indispensable role in dosage compensation in Drosophila.Nucleic Acids Res2019
29134516Structural and biochemical insights into human zinc finger protein AEBP2 reveals interactions with RBBP4.Protein Cell2018
30045876Structural and functional characterization of the RBBP4-ZNF827 interaction and its role in NuRD recruitment to telomeres.Biochem J2018
29965776Dynamic Nature of CTCF Tandem 11 Zinc Fingers in Multivalent Recognition of DNA As Revealed by NMR Spectroscopy.J Phys Chem Lett2018
30095198Structural and functional characterization of hMEX-3C Ring finger domain as an E3 ubiquitin ligase.Protein Sci2018
30289413Structural insights into the recognition of phosphorylated Hop1 by Mek1.Acta Crystallogr D Struct Biol2018
30388185Unveiling the structural features that determine the dual methyltransferase activities of Streptococcus pneumoniae RlmCD.PLoS Pathog2018
29040603Mitosis-specific acetylation tunes Ran effector binding for chromosome segregation.J Mol Cell Biol2018
29134956The 11th C2H2 zinc finger and an adjacent C-terminal arm are responsible for TZAP recognition of telomeric DNA.Cell Res2018
27757847Structural insights into the recognition of phosphorylated FUNDC1 by LC3B in mitophagy.Protein Cell2017
29107486Insights into the Structure of Dimeric RNA Helicase CsdA and Indispensable Role of Its C-Terminal Regions.Structure2017
29036323Structural basis for the specific recognition of 18S rRNA by APUM23.Nucleic Acids Res2017
28934467The important conformational plasticity of DsrA sRNA for adapting multiple target regulation.Nucleic Acids Res2017
28949991Structural insights into substrate selectivity of ribosomal RNA methyltransferase RlmCD.PLoS One2017
29138396Polo-like kinase 1 coordinates biosynthesis during cell cycle progression by directly activating pentose phosphate pathway.Nat Commun2017
28808060The human RNA-binding protein and E3 ligase MEX-3C binds the MEX-3-recognition element (MRE) motif with high affinity.J Biol Chem2017
28752165Structural and dynamic properties of the C-terminal region of the Escherichia coli RNA chaperone Hfq: integrative experimental and computational studies.Phys Chem Chem Phys2017
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Collaborators

Wei Wang
Co-authored papers 6
Hao Fan
College of Biotechnology and Bioengineering, Zhejiang University of Technology
Co-authored papers 2
Yuedong Yang
Co-authored papers 2
Rong Xiao
School of Public Health, Capital Medical University
Co-authored papers 1
Lucy Stols
Midwest Center for Structural Genomics, Argonne National Laboratory
Co-authored papers 1
Andras Fiser
Albert Einstein College of Medicine
Co-authored papers 1
Kashif Ahmed
The Wright Center for Graduate Medical Education
Co-authored papers 1
Hee-Won Park
Kangwon National University College of Medicine
Co-authored papers 1
Stephen K Burley
The State University of New Jersey
Co-authored papers 1
James E Bray
University of Oxford
Co-authored papers 1
Andrej Sali (CM4AI)
University of California San Francisco
Co-authored papers 1
Joel L Sussman
Weizmann Institute of Science
Co-authored papers 1
Raymond C Stevens
iHuman Institute, ShanghaiTech University
Co-authored papers 1
Sirano Dhe-Paganon
Dana-Farber Cancer Institute
Co-authored papers 1
Mei Jiang
The University of Texas MD Anderson Cancer Center
Co-authored papers 1
Kristin C Gunsalus
Center for Genomics and Systems Biology, New York University Abu Dhabi (NYUAD)
Co-authored papers 1
Masayori Inouye
Robert Wood Johnson Medical School, Rutgers University
Co-authored papers 1
Gaetano T Montelione
Rensselaer Polytechnic Institute
Co-authored papers 1
Pengyuan Yang
Co-authored papers 1
Ritu Shastry
Co-authored papers 1
Opher Gileadi
Structural Genomics Consortium Karolinska Institute Stockholm Sweden.
Co-authored papers 1
Zihe Rao
Nankai University
Co-authored papers 1
Ian A Wilson
The Scripps Research Institute, USA The Skaggs Institute for Chemical Biology
Co-authored papers 1
Kellie Cunningham
Co-authored papers 1
F W Studier
Brookhaven National Laboratory
Co-authored papers 1
P??r Nordlund
Karolinska Institutet, BioClinicum J6
Co-authored papers 1
Geoffrey S Waldo
Los Alamos National Laboratory
Co-authored papers 1
Dongyan Wang
Guizhou Medical University
Co-authored papers 1
Shiv I S Grewal
National Cancer Institute, National Institutes of Health
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Chang-Yub Kim
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Release 1.2