Author details

Full Name

Mi-Youn Brusniak

Affiliation

ORCID

Career Start Year

1996

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
35584229	Ex silico engineering of cystine-dense peptides yielding a potent bispecific T cell engager.	Sci Transl Med	2022
33130903	Optimal therapeutic targeting by HDAC inhibition in biopsy-derived treatment-naÃ¯ve diffuse midline glioma models.	Neuro Oncol	2021
33986749	ARTEMIS: A Novel Mass-Spec Platform for HLA-Restricted Self and Disease-Associated Peptide Discovery.	Front Immunol	2021
32132215	A potent peptide-steroid conjugate accumulates in cartilage and reverses arthritis without evidence of systemic corticosteroid exposure.	Sci Transl Med	2020
30892059	Simultaneous extraction and analysis of multiple cystine-dense peptides by Î¼SPE and microflow-MS/MS from plasma.	Bioanalysis	2019
31208323	Laboratory information management software for engineered mini-protein therapeutic workflow.	BMC Bioinformatics	2019
29523778	Publisher Correction: Mammalian display screening of diverse cystine-dense peptides for difficult to drug targets.	Nat Commun	2018
29483648	Screening, large-scale production and structure-based classification of cystine-dense peptides.	Nat Struct Mol Biol	2018
29269835	Mammalian display screening of diverse cystine-dense peptides for difficult to drug targets.	Nat Commun	2017
27453469	Human SRMAtlas: A Resource of Targeted Assays to Quantify the Complete Human Proteome.	Cell	2016
25838814	An integrated quantification method to increase the precision, robustness, and resolution of protein measurement in human plasma samples.	Clinical Proteomics	2015
22069307	Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam principles).	Proteomics	2012
22577019	An assessment of current bioinformatic solutions for analyzing LC-MS data acquired by selected reaction monitoring technology.	Proteomics	2012
22318887	PASSEL: the PeptideAtlas SRMexperiment library.	Proteomics	2012
23051804	A cross-platform toolkit for mass spectrometry and proteomics.	Nat Biotechnol	2012
22053864	Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles).	J Proteome Res	2012
22159873	TraML--a standard format for exchange of selected reaction monitoring transition lists.	Mol Cell Proteomics	2012
22213554	Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam principles).	Proteomics Clin Appl	2011
21423193	mProphet: automated data processing and statistical validation for large-scale SRM experiments.	Nat Methods	2011
21414234	ATAQS: A computational software tool for high throughput transition optimization and validation for selected reaction monitoring mass spectrometry.	BMC Bioinformatics	2011
21182202	The Protein Information and Property Explorer 2: gaggle-like exploration of biological proteomic data within one webpage.	Proteomics	2011
22052993	Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles).	Mol Cell Proteomics	2011
21967198	jTraML: an open source Java API for TraML, the PSI standard for sharing SRM transitions.	J Proteome Res	2011
21177495	Phosphoproteomic analysis reveals interconnected system-wide responses to perturbations of kinases and phosphatases in yeast.	Sci Signal	2010
19411281	Halogenated peptides as internal standards (H-PINS): introduction of an MS-based internal standard set for liquid chromatography-mass spectrometry.	Mol Cell Proteomics	2009
18173218	An assessment of software solutions for the analysis of mass spectrometry based quantitative proteomics data.	J Proteome Res	2008
19087345	Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics.	BMC Bioinformatics	2008
20157627	Differential Plasma Glycoproteome of p19 Skin Cancer Mouse Model Using the Corra Label-Free LC-MS Proteomics Platform.	Clin Proteomics	2008
18408245	Targeted quantitative analysis of Streptococcus pyogenes virulence factors by multiple reaction monitoring.	Mol Cell Proteomics	2008
17726677	SuperHirn - a novel tool for high resolution LC-MS-based peptide/protein profiling.	Proteomics	2007
11918075	High-affinity interactions of ligands at recombinant guinea pig 5HT7 receptors.	Journal of Computer-Aided Molecular Design	2001
10956209	CoMFA-based prediction of agonist affinities at recombinant wild type versus serine to alanine point mutated D2 dopamine receptors.	Journal of Medicinal Chemistry	2000
9784114	CoMFA-based prediction of agonist affinities at recombinant D1 vs D2 dopamine receptors.	Journal of Medicinal Chemistry	1998
8632409	Comparative molecular field analysis-based prediction of drug affinities at recombinant D1A dopamine receptors.	Journal of Medicinal Chemistry	1996