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Author Details

Yarui Diao
Duke University Medical Center
2009
36
21
PMIDPaper TitleJournal TitlePublished Year
36521495Prolonged hypernutrition impairs TREM2-dependent efferocytosis to license chronic liver inflammation and NASH development.Immunity2023
37938770TNRC18 engages H3K9me3 to mediate silencing of endogenous retrotransposons.Nature2023
37818863HiCAR: Analysis of Open Chromatin Associated Long-range Chromatin Interaction Using Low-Input Materials.Curr Protoc2023
37382627Single-cell chromatin accessibility profiling reveals a self-renewing muscle satellite cell state.J Cell Biol2023
37474847Crosstalk between RNA m<sup>6</sup>A and DNA methylation regulates transposable element chromatin activation and cell fate in human pluripotent stem cells.Nat Genet2023
37066299Pro-inflammatory macrophages impair skeletal muscle regeneration in ischemic-damaged limbs by inducing precocious differentiation of satellite cells.bioRxiv2023
37293038Modeling kidney development, disease, and plasticity with clonal expandable nephron progenitor cells and nephron organoids.bioRxiv2023
35196517HiCAR is a robust and sensitive method to analyze open-chromatin-associated genome organization.Mol Cell2022
35613278The Hippo pathway mediates Semaphorin signaling.Sci Adv2022
35421801Myoblast deactivation within engineered human skeletal muscle creates a transcriptionally heterogeneous population of quiescent satellite-like cells.Biomaterials2022
36504079Maf family transcription factors are required for nutrient uptake in the mouse neonatal gut.Development2022
36289338Subtype-specific 3D genome alteration in acute myeloid leukaemia.Nature2022
34618689Tumor-propagating side population cells are a dynamic subpopulation in undifferentiated pleomorphic sarcoma.JCI Insight2021
33655210CRISPR-SE: a brute force search engine for CRISPR design.NAR Genom Bioinform2021
33139953BAHCC1 binds H3K27me3 via a conserved BAH module to mediate gene silencing and oncogenesis.Nat Genet2020
31907410Erythromyeloid progenitors give rise to a population of osteoclasts that contribute to bone homeostasis and repair.Nat Cell Biol2020
31019297NAD metabolic dependency in cancer is shaped by gene amplification and enhancer remodelling.Nature2019
31272828Plug-and-Play Protein Modification Using Homology-Independent Universal Genome Engineering.Neuron2019
31501517A compendium of promoter-centered long-range chromatin interactions in the human genome.Nat Genet2019
31462499Neutrophils promote tumor resistance to radiation therapy.Proc Natl Acad Sci U S A2019
31519520Transcription Factor-Directed Re-wiring of Chromatin Architecture for Somatic Cell Nuclear Reprogramming toward trans-Differentiation.Mol Cell2019
29426367PIP5K1α promotes myogenic differentiation via AKT activation and calcium release.Stem Cell Res Ther2018
30135582RAP2 mediates mechanoresponses of the Hippo pathway.Nature2018
28535373A Molecular Switch Regulating Cell Fate Choice between Muscle Progenitor Cells and Brown Adipocytes.Dev Cell2017
28417999A tiling-deletion-based genetic screen for cis-regulatory element identification in mammalian cells.Nat Methods2017
26813977A new class of temporarily phenotypic enhancers identified by CRISPR/Cas9-mediated genetic screening.Genome Res2016
27524611STAT3 Regulates Self-Renewal of Adult Muscle Satellite Cells during Injury-Induced Muscle Regeneration.Cell Rep2016
27458373Role of miR-211 in Neuronal Differentiation and Viability: Implications to Pathogenesis of Alzheimer's Disease.Front Aging Neurosci2016
25693564Chromatin architecture reorganization during stem cell differentiation.Nature2015
26635599MicroRNAs 99b-5p/100-5p Regulated by Endoplasmic Reticulum Stress are Involved in Abeta-Induced Pathologies.Front Aging Neurosci2015
26051902Plasma microRNA-586 is a new biomarker for acute graft-versus-host disease.Ann Hematol2015
24247238miR-203, a tumor suppressor frequently down-regulated by promoter hypermethylation in rhabdomyosarcoma.J Biol Chem2014
25148207Genome-wide analysis of miRNA signature in the APPswe/PS1οE9 mouse model of alzheimer's disease.PLoS One2014
22862948Pax3/7BP is a Pax7- and Pax3-binding protein that regulates the proliferation of muscle precursor cells by an epigenetic mechanism.Cell Stem Cell2012
21078955Oxidation-induced intramolecular disulfide bond inactivates mitogen-activated protein kinase kinase 6 by inhibiting ATP binding.Proc Natl Acad Sci U S A2010
19620279SOCS1, SOCS3, and PIAS1 promote myogenic differentiation by inhibiting the leukemia inhibitory factor-induced JAK1/STAT1/STAT3 pathway.Mol Cell Biol2009
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Collaborators

Bing Ren
Center for Epigenomics, University of California San Diego
Co-authored papers 8
Zhipeng Meng
University of Miami Miller School of Medicine
Co-authored papers 4
Inkyung Jung
Co-authored papers 4
Bin Li
Co-authored papers 4
Kun-Liang Guan
University of California San Diego
Co-authored papers 4
Zhen Ye
Ludwig Institute for Cancer Research, University of California San Diego
Co-authored papers 3
Yunjiang Qiu
Ludwig Institute for Cancer Research, University of California
Co-authored papers 3
Kimberly C Lin
University of California san francisco
Co-authored papers 3
Yin Shen
Wenzhou Medical University
Co-authored papers 3
Cao Fang
University of California
Co-authored papers 2
Adam J Engler
University of California
Co-authored papers 2
Anthony D Schmitt
Co-authored papers 2
Derek T Peters
Duke University Medical Center
Co-authored papers 2
Ah Young Lee
Co-authored papers 2
Brian D Strahl
University of North Carolina
Co-authored papers 2
Nenad Bursac
Co-authored papers 1
Frank B Furnari
University of California San Diego
Co-authored papers 1
Poshen B Chen
Co-authored papers 1
Min Luo
Institute of Biomedical Science and Children's Hospital, Fudan University
Co-authored papers 1
Sora Chee
Co-authored papers 1
Siddarth Selvaraj
Co-authored papers 1
Jessica Antosiewicz-Bourget
Co-authored papers 1
Hyun Woo Park
College of Life Science and Biotechnology, Yonsei University
Co-authored papers 1
Xiaoqiong Wang
The University of Texas MD Anderson Cancer Center
Co-authored papers 1
Vineet Bafna
University of California San Diego
Co-authored papers 1
Eliezer Masliah
National Institute On Aging
Co-authored papers 1
Samantha Kuan
University of California San Diego
Co-authored papers 1
Aditya Kumar
Rice University, University of California San Diego
Co-authored papers 1
Erik J Soderblom
Center for Genomic and Computational Biology, Duke University
Co-authored papers 1
Yawar J Qadri
Jazan University
Co-authored papers 1
Release 1.2