Author details

Full Name

Pei Wang

Affiliation

ORCID

Career Start Year

2005

Papers

142

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37544983	Examination of fully automated mammographic density measures using LIBRA and breast cancer risk in a cohort of 21,000 non-Hispanic white women.	Breast Cancer Res	2023
37575948	Proteomics of adjacent-to-tumor samples uncovers clinically relevant biological events in hepatocellular carcinoma.	Natl Sci Rev	2023
37633924	Coordinated single-cell tumor microenvironment dynamics reinforce pancreatic cancer subtype.	Nat Commun	2023
37781601	Exploring the Role of YAP1 and TAZ in Pancreatic Acinar Cells and the Therapeutic Potential of VT-104 in Pancreatic Inflammation.		2023
37478973	Monitoring Both Extended and Tryptic Forms of Stable Isotope-Labeled Standard Peptides Provides an Internal Quality Control of Proteolytic Digestion in Targeted Mass Spectrometry-Based Assays.		2023
37409267	: A mixture model for studying the function of ACE2 based on bulk proteogenomic data.		2023
37205196	A multiplexed assay for quantifying immunomodulatory proteins supports correlative studies in immunotherapy clinical trials.	Front Oncol	2023
36690614	MiXcan: a framework for cell-type-aware transcriptome-wide association studies with an application to breast cancer.	Nat Commun	2023
36548210	Argonaute Combined with Recombinase Polymerase Amplification for Rapid and Sensitive Detection of .		2023
37541199	Proteogenomic analysis of chemo-refractory high-grade serous ovarian cancer.	Cell	2023
37494474	Pharmaco-proteogenomic characterization of liver cancer organoids for precision oncology.	Sci Transl Med	2023
34383649	Gene Differential Co-Expression Networks Based on RNA-Seq: Construction and Its Applications.	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2022
36305725	RPA-ligation-qPCR combined method for genotyping the SARS-CoV-2 key mutation E484Q.	Acta Biochimica et Biophysica Sinica	2022
35767427	Internal Standard Triggered-Parallel Reaction Monitoring Mass Spectrometry Enables Multiplexed Quantification of Candidate Biomarkers in Plasma.	Anal Chem	2022
35931981	DAGBagM: learning directed acyclic graphs of mixed variables with an application to identify protein biomarkers for treatment response in ovarian cancer.	BMC Bioinformatics	2022
35734426	Editorial: Methods for Single-Cell and Microbiome Sequencing Data.	Front Genet	2022
35668134	Improving preeclampsia risk prediction by modeling pregnancy trajectories from routinely collected electronic medical record data.	NPJ Digit Med	2022
34971568	Proteogenomic characterization identifies clinically relevant subgroups of intrahepatic cholangiocarcinoma.	Cancer Cell	2022
34645978	A highly annotated database of genes associated with platinum resistance in cancer.	Oncogene	2021
34079799	Hippo Signaling Pathway in Pancreas Development.	Frontiers in Cell and Developmental Biology	2021
33707295	Mutations Cause Mechanotransduction Defects in Cochlear Hair Cells.	Journal of Neuroscience	2021
34237791	Simultaneous visual diagnosis of acute hepatopancreatic necrosis disease and Enterocytozoon hepatopenaei infection in shrimp with duplex recombinase polymerase amplification.	Journal of Fish Diseases	2021
33694178	Reduced rank multinomial logistic regression in Markov chains with application to cognitive data.	Stat Med	2021
33577785	Proteogenomic and metabolomic characterization of human glioblastoma.	Cancer Cell	2021
34036290	A community effort to identify and correct mislabeled samples in proteogenomic studies.	Patterns (N Y)	2021
34136904	Quantification of Human Epidermal Growth Factor Receptor 2 by Immunopeptide Enrichment and Targeted Mass Spectrometry in Formalin-Fixed Paraffin-Embedded and Frozen Breast Cancer Tissues.	Clin Chem	2021
33058942	A mammalian system for high-resolution imaging of intact cells by cryo-electron tomography.	Progress in Biophysics and Molecular Biology	2021
33417831	Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma.	Cancer Cell	2021
35028612	Multiomic analysis identifies CPT1A as a potential therapeutic target in platinum-refractory, high-grade serous ovarian cancer.	Cell Rep Med	2021
32770063	Multiscale causal networks identify VGF as a key regulator of Alzheimer's disease.	Nat Commun	2020
35706432	Feasibility as a mechanism for model identification and validation.	J Appl Stat	2020
31960055	A Dual Reporter EndoC-Î²H1 Human Î²-Cell Line for Efficient Quantification of Calcium Flux and Insulin Secretion.	Endocrinology	2020
32358997	ProNetView-ccRCC: A Web-Based Portal to Interactively Explore Clear Cell Renal Cell Carcinoma Proteogenomics Networks.	Proteomics	2020
31835136	Prediction of survival of HPV16-negative, p16-negative oral cavity cancer patients using a 13-gene signature: A multicenter study using FFPE samples.	Oral Oncol	2020
31923397	Integrated Proteogenomic Characterization of Clear Cell Renal Cell Carcinoma.	Cell	2020
32510176	ProTrack: An Interactive Multi-Omics Data Browser for Proteogenomic Studies.	Proteomics	2020
30890747	Bacteriophage T4 capsid as a nanocarrier for Peptide-N-Glycosidase F immobilization through self-assembly.	Scientific Reports	2019
31585088	Integrated Proteogenomic Characterization of HBV-Related Hepatocellular Carcinoma.	Cell	2019
31730861	Integrated Proteogenomic Characterization of HBV-Related Hepatocellular Carcinoma.	Cell	2019
30378043	Lineage Tracing of Primary Human Pancreatic Acinar and Ductal Cells for Studying Acinar-to-Ductal Metaplasia.	Methods in Molecular Biology	2019
29939200	Using multivariate mixed-effects selection models for analyzing batch-processed proteomics data with non-ignorable missingness.	Biostatistics	2019
31528855	Ductal acinar? Recent insights into identifying cell lineage of pancreatic ductal adenocarcinoma.	Annals of Pancreatic Cancer	2019
31281117	Integrative Proteo-genomic Analysis to Construct CNA-protein Regulatory Map in Breast and Ovarian Tumors.	Mol Cell Proteomics	2019
31227599	Insights into Impact of DNA Copy Number Alteration and Methylation on the Proteogenomic Landscape of Human Ovarian Cancer via a Multi-omics Integrative Analysis.	Molecular and Cellular Proteomics	2019
30958743	Radiomics Features Measured with Multiparametric Magnetic Resonance Imaging Predict Prostate Cancer Aggressiveness.	J Urol	2019
29786695	The asthma mobile health study, smartphone data collected using ResearchKit.	Sci Data	2018
30057342	Characterizing functional consequences of DNA copy number alterations in breast and ovarian tumors by spaceMap.	Journal of Genetics and Genomics	2018
30204156	The Mount Sinai cohort of large-scale genomic, transcriptomic and proteomic data in Alzheimer's disease.	Sci Data	2018
29949994	A new method for constructing tumor specific gene co-expression networks based on samples with tumor purity heterogeneity.		2018
30235319	Salivary metabolite profiling distinguishes patients with oral cavity squamous cell carcinoma from normal controls.	PLoS ONE	2018