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Author Details

Florian Stengel
University of Konstanz Universitatsstrasse 10
2009
57
28
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37994785Interactome of intact chromatosome variants with site-specifically ubiquitylated and acetylated linker histone H1.2.Nucleic Acids Res2024
36264037Chemical proteomics reveals interactors of the alarmone diadenosine triphosphate in the cancer cell line H1299.J Pept Sci2023
37538020Measuring Changes in Protein Complex Membership at Scale.J Proteome Res2023
37443299Crosstalk between regulatory elements in disordered TRPV4 N-terminus modulates lipid-dependent channel activity.Nat Commun2023
36792600Chemoproteomic discovery of a human RNA ligase.Nat Commun2023
35139378A comprehensive landscape of 60S ribosome biogenesis factors.Cell Rep2022
35522782Chemical Proteomics of the Tumor Suppressor Fhit Covalently Bound to the Cofactor Ap<sub>3</sub>A Elucidates Its Inhibitory Action on Translation.J Am Chem Soc2022
36510358Mono- and Intralink Filter (Mi-Filter) To Reduce False Identifications in Cross-Linking Mass Spectrometry Data.Anal Chem2022
36482249Sequence-specific remodeling of a topologically complex RNP substrate by Spb4.Nat Struct Mol Biol2022
36278895The translation regulator Zar1l controls timing of meiosis in Xenopus oocytes.Development2022
36097293Visualizing maturation factor extraction from the nascent ribosome by the AAA-ATPase Drg1.Nat Struct Mol Biol2022
36114200Electrostatic and steric effects underlie acetylation-induced changes in ubiquitin structure and function.Nat Commun2022
35188710Profiling of the ADP-Ribosylome in Living Cells.Angew Chem Int Ed Engl2022
34108453Site-specific ubiquitylation acts as a regulator of linker histone H1.Nat Commun2021
33909994Pathological polyQ expansion does not alter the conformation of the Huntingtin-HAP40 complex.Structure2021
33730565Parkin is an E3 ligase for the ubiquitin-like modifier FAT10, which inhibits Parkin activation and mitophagy.Cell Rep2021
34608152Chemical proteomic profiling reveals protein interactors of the alarmones diadenosine triphosphate and tetraphosphate.Nat Commun2021
34487489HspB8 prevents aberrant phase transitions of FUS by chaperoning its folded RNA-binding domain.Elife2021
34542282Structural Probing of Hsp26 Activation and Client Binding by Quantitative Cross-Linking Mass Spectrometry.Anal Chem2021
34351766Interactome of Site-Specifically Acetylated Linker Histone H1.J Proteome Res2021
32301549The Length of a Ubiquitin Chain: A General Factor for Selective Recognition by Ubiquitin-Binding Proteins.Angew Chem Int Ed Engl2020
32011863Proteome-Wide Structural Probing of Low-Abundant Protein Interactions by Cross-Linking Mass Spectrometry.Anal Chem2020
33065067Toward Increased Reliability, Transparency, and Accessibility in Cross-linking Mass Spectrometry.Structure2020
32966807Identification of Small-Molecule Activators of the Ubiquitin Ligase E6AP/UBE3A and Angelman Syndrome-Derived E6AP/UBE3A Variants.Cell Chem Biol2020
32855237A ubiquitin variant-based affinity approach selectively identifies substrates of the ubiquitin ligase E6AP in complex with HPV-11 E6 or HPV-16 E6.J Biol Chem2020
31115337Mechanism of completion of peptidyltransferase centre assembly in eukaryotes.Elife2019
31377116Early Scanning of Nascent Polypeptides inside the Ribosomal Tunnel by NAC.Mol Cell2019
31575873The ubiquitin-like modifier FAT10 interferes with SUMO activation.Nat Commun2019
31045356First Community-Wide, Comparative Cross-Linking Mass Spectrometry Study.Anal Chem2019
30361475Structural dynamics of the E6AP/UBE3A-E6-p53 enzyme-substrate complex.Nat Commun2018
29933361Lipidated apolipoprotein E4 structure and its receptor binding mechanism determined by a combined cross-linking coupled to mass spectrometry and molecular dynamics approach.PLoS Comput Biol2018
28893983Mechanisms for restraining cAMP-dependent protein kinase revealed by subunit quantitation and cross-linking approaches.Proc Natl Acad Sci U S A2017
28297669Molecular Landscape of the Ribosome Pre-initiation Complex during mRNA Scanning: Structural Role for eIF3c and Its Control by eIF5.Cell Rep2017
29045006Identification of Proteins Interacting with Ubiquitin Chains.Angew Chem Int Ed Engl2017
29162807Molecular basis of AKAP79 regulation by calmodulin.Nat Commun2017
27031283Structural and kinetic analysis of the COP9-Signalosome activation and the cullin-RING ubiquitin ligase deneddylation cycle.Elife2016
26654279Crosslinking and Mass Spectrometry: An Integrated Technology to Understand the Structure and Function of Molecular Machines.Trends Biochem Sci2016
27056566The Evolving Contribution of Mass Spectrometry to Integrative Structural Biology.J Am Soc Mass Spectrom2016
25546376Chemical cross-linking/mass spectrometry maps the amyloid β peptide binding region on both apolipoprotein E domains.ACS Chem Biol2015
26245380Crucial HSP70 co-chaperone complex unlocks metazoan protein disaggregation.Nature2015
26130806Structural characterization of the interaction of Ubp6 with the 26S proteasome.Proc Natl Acad Sci U S A2015
24509631A mass spectrometry-based hybrid method for structural modeling of protein complexes.Nat Methods2014
28898626Molecular Architecture of the 40Sâ¿¿eIF1â¿¿eIF3 Translation Initiation Complex.Cell2014
25171412Molecular architecture of the 40Sâ¿¿eIF1â¿¿eIF3 translation initiation complex.Cell2014
25144743Structural and biochemical characterization of the Cop9 signalosome CSN5/CSN6 heterodimer.PLoS One2014
22576357Small heat-shock proteins: paramedics of the cell.Top Curr Chem2013
23840795Hsp70 oligomerization is mediated by an interaction between the interdomain linker and the substrate-binding domain.PLoS One2013
24034246Molecular architecture of the ATP-dependent chromatin-remodeling complex SWR1.Cell2013
23522702Mass spectrometry supported determination of protein complex structure.Curr Opin Struct Biol2013
22180098Joining forces: integrating proteomics and cross-linking with the mass spectrometry of intact complexes.Mol Cell Proteomics2012
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Collaborators

Ruedi Aebersold
Institute of Molecular Systems Biology, ETH Zurich
Co-authored papers 15
Carol V Robinson
University of Oxford
Co-authored papers 9
Alexander Leitner
ETH Zurich
Co-authored papers 6
Jan P Erzberger
UT Southwestern Medical Center
Co-authored papers 5
Riccardo Pellarin
CNRS UMR 5086 and Universite Claude Bernard Lyon 1
Co-authored papers 4
Andrej Sali (CM4AI)
University of California San Francisco
Co-authored papers 3
Wolfgang Baumeister
Max Planck Institute of Biochemistry
Co-authored papers 3
Nenad Ban
Institute of Molecular Biology and Biophysics, ETH Zurich
Co-authored papers 3
Eri Sakata
Max Planck Institute of Biochemistry
Co-authored papers 3
Christoph H Borchers
McGill University
Co-authored papers 2
Friedrich F??rster
Utrecht University
Co-authored papers 2
Matthias Peter
Institute of Biochemistry, ETH Zurich
Co-authored papers 2
Thomas Walzthoeni
Institute for Computational Biology
Co-authored papers 2
Evgeniy V Petrotchenko
Lady Davis Institute for Medical Research, Jewish General Hospital, McGill University
Co-authored papers 2
David C Schriemer
University of Calgary, 0 Hospital Drive NW
Co-authored papers 2
Lan Huang
University of California Irvine
Co-authored papers 2
Suyang Zhang
Li Ka Shing Institute of Health Sciences, Chinese University of Hong Kong
Co-authored papers 2
Michael R Hoopmann
Institute for Systems Biology
Co-authored papers 2
Richard A Scheltema
Utrecht Institute for Pharmaceutical Sciences, Utrecht University
Co-authored papers 2
James E Bruce
Co-authored papers 2
Nir Kalisman
Institute of Life Sciences, The Hebrew University
Co-authored papers 2
Tanja Schaefer
Institute for Molecular Biology and Biophysics
Co-authored papers 2
Petr Nov??k
Institute of Microbiology of the CAS
Co-authored papers 2
Juri Rappsilber
Institute for Biotechnology, Technical University Berlin
Co-authored papers 2
Andrea Sinz
Center for Structural Mass Spectrometry, Martin Luther University Halle-Wittenberg
Co-authored papers 2
Robert L Moritz
Institute for Systems Biology
Co-authored papers 2
Carla Schmidt
Johannes Gutenberg University Mainz
Co-authored papers 2
Michael G??tze
and Pharmacy, Freie Universitat Berlin
Co-authored papers 2
Albert J R Heck
Utrecht University
Co-authored papers 2
Karl Mechtler
IMP-Institute of Molecular Pathology
Co-authored papers 2
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