Skip to Main Content

Author Details

Georg Zeller
Max Planck Institute for Developmental Biology
2007
72
47
PMIDPaper TitleJournal TitlePublished Year
36408900proGenomes3: approaching one million accurately and consistently annotated high-quality prokaryotic genomes.Nucleic Acids Res2023
37074928PyHMMER: a Python library binding to HMMER for efficient sequence analysis.Bioinformatics2023
37131219Location and condition based reconstruction of colon cancer microbiome from human RNA sequencing data.Genome Med2023
37031065Remodelling of the intestinal ecosystem during caloric restriction and fasting.Trends Microbiol2023
35260444A faecal microbiota signature with high specificity for pancreatic cancer.Gut2022
35732736Biosynthetic potential of the global ocean microbiome.Nature2022
35364006Microbiota-dependent activation of the myeloid calcineurin-NFAT pathway inhibits B7H3- and B7H4-dependent anti-tumor immunity in colorectal cancer.Immunity2022
35850148Bacterial retrons encode phage-defending tripartite toxin-antitoxin systems.Nature2022
36464731Cultivation-independent genomes greatly expand taxonomic-profiling capabilities of mOTUs across various environments.Microbiome2022
36244970Depression and fatigue in active IBD from a microbiome perspective-a Bayesian approach to faecal metagenomics.BMC Med2022
35287713Calorie restriction improves metabolic state independently of gut microbiome composition: a randomized dietary intervention trial.Genome Med2022
35027765Identifying temporal and spatial patterns of variation from multimodal data using MEFISTO.Nat Methods2022
33398099Metabolic cooperation and spatiotemporal niche partitioning in a kefir microbial community.Nat Microbiol2021
33785070Microbiome meta-analysis and cross-disease comparison enabled by the SIAMCAT machine learning toolbox.Genome Biol2021
33692771Statistical and Machine Learning Techniques in Human Microbiome Studies: Contemporary Challenges and Solutions.Front Microbiol2021
34646011Unravelling the collateral damage of antibiotics on gut bacteria.Nature2021
34789871Reporting guidelines for human microbiome research: the STORMS checklist.Nat Med2021
34453895Commensal Clostridiales strains mediate effective anti-cancer immune response against solid tumors.Cell Host Microbe2021
34387940mOTUs: Profiling Taxonomic Composition, Transcriptional Activity and Strain Populations of Microbial Communities.Curr Protoc2021
32513234Analysis of 1321 Eubacterium rectale genomes from metagenomes uncovers complex phylogeographic population structure and subspecies functional adaptations.Genome Biol2020
31647096proGenomes2: an improved database for accurate and consistent habitat, taxonomic and functional annotations of prokaryotic genomes.Nucleic Acids Res2020
32055399Metabolic models predict bacterial passengers in colorectal cancer.Cancer Metab2020
32053988Changes in Plasma Short-Chain Fatty Acid Levels after Dietary Weight Loss Among Overweight and Obese Adults over 50 Weeks.Nutrients2020
32997434The gut microbiome in solid organ transplantation.Pediatr Transplant2020
31075175Effects of Weight-Loss Interventions on Short-Chain Fatty Acid Concentrations in Blood and Feces of Adults: A Systematic Review.Adv Nutr2019
31664237Author Correction: Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation.Nat Med2019
30833550Microbial abundance, activity and population genomic profiling with mOTUs2.Nat Commun2019
30936548Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation.Nat Med2019
30936547Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer.Nat Med2019
30747106Extensive transmission of microbes along the gastrointestinal tract.Elife2019
29255284Enterotypes in the landscape of gut microbial community composition.Nat Microbiol2018
29555994Extensive impact of non-antibiotic drugs on human gut bacteria.Nature2018
29440750Publisher Correction: Enterotypes in the landscape of gut microbial community composition.Nat Microbiol2018
29556107Nutritional preferences of human gut bacteria reveal their metabolic idiosyncrasies.Nat Microbiol2018
29242367Subspecies in the global human gut microbiome.Mol Syst Biol2017
28235227[Microbial Biomarkers for Early Cancer Detection].Dtsch Med Wochenschr2017
28967887Towards standards for human fecal sample processing in metagenomic studies.Nat Biotechnol2017
27077120Gut Microbiota Linked to Sexual Preference and HIV Infection.EBioMedicine2016
27171425Colorectal Cancer and the Human Gut Microbiome: Reproducibility with Whole-Genome Shotgun Sequencing.PLoS One2016
27256313CART-a chemical annotation retrieval toolkit.Bioinformatics2016
27153620MOCAT2: a metagenomic assembly, annotation and profiling framework.Bioinformatics2016
27126044Durable coexistence of donor and recipient strains after fecal microbiota transplantation.Science2016
25999513Ocean plankton. Structure and function of the global ocean microbiome.Science2015
25888008Temporal and technical variability of human gut metagenomes.Genome Biol2015
24413671Oqtans: the RNA-seq workbench in the cloud for complete and reproducible quantitative transcriptome analysis.Bioinformatics2014
25432777Potential of fecal microbiota for early-stage detection of colorectal cancer.Mol Syst Biol2014
25038229Novel drug candidates for the treatment of metastatic colorectal cancer through global inverse gene-expression profiling.Cancer Res2014
24681719A fair comparison.Nat Methods2014
23632384Characterization of drug-induced transcriptional modules: towards drug repositioning and functional understanding.Mol Syst Biol2013
24141494Metagenomic species profiling using universal phylogenetic marker genes.Nat Methods2013
  • 1 - 50 of 72

Recommended Authors

Taylor Reiter
University of California davis
Career Start Year 2016
Number of shared co-authors 0
Angela L Jones
Vanderbilt University Medical Center
Career Start Year 2015
Number of shared co-authors 1
Mickael Leclercq
CHU de Quebec-Laval University Research Center
Career Start Year 2012
Number of shared co-authors 0
Xiaowei Zhan
Southwestern Medical Center, University of Texas
Career Start Year 2012
Number of shared co-authors 2
Artem S Kasianov
Institute for Information Transmission Problems of the Russian Academy of Sciences
Career Start Year 2011
Number of shared co-authors 1
Serghei Mangul
School of Pharmacy, University of Southern California
Career Start Year 2011
Number of shared co-authors 4
Kevin Riehle
Baylor College of Medicine
Career Start Year 2011
Number of shared co-authors 2
Axel K??nstner
University of Lubeck
Career Start Year 2009
Number of shared co-authors 4
Jaeyun Sung
Mayo Clinic
Career Start Year 2009
Number of shared co-authors 11
Cameron Ross MacPherson
Rigshospitalet, Copenhagen University Hospital
Career Start Year 2008
Number of shared co-authors 1
Matthew L Settles
University of California Davis Genome Center
Career Start Year 2008
Number of shared co-authors 2
Timothy L Tickle
Broad Institute
Career Start Year 2007
Number of shared co-authors 10
Daniel McDonald
University of California San Diego
Career Start Year 2007
Number of shared co-authors 19
Kim-Anh L?? Cao
University of Melbourne
Career Start Year 2007
Number of shared co-authors 4
Jan Baumbach
University of Hamburg
Career Start Year 2006
Number of shared co-authors 6
Brandi L Cantarel
University of Texas Southwestern Medical Center
Career Start Year 2006
Number of shared co-authors 8
Raoul J P Bonnal
National Institute for Molecular Genetics "Romeo ed Enrica Invernizzi"
Career Start Year 2006
Number of shared co-authors 2
Christopher J Fields
University of Illinois Urbana-Champaign
Career Start Year 2005
Number of shared co-authors 1
Arnaud Droit
Centre de Recherche du CHU de Quebec-Universite, Universite Laval
Career Start Year 2005
Number of shared co-authors 1
Gang Fang
Icahn School of Medicine at Mount Sinai
Career Start Year 2005
Number of shared co-authors 6
Joshua Orvis
Institute for Genome Sciences, University of Maryland School of Medicine
Career Start Year 2004
Number of shared co-authors 7
Daniel G Pinheiro
Faculdade de Ciencias Agrarias e Veterinarias, Universidade Estadual Paulista (UNESP)
Career Start Year 2004
Number of shared co-authors 1
Jun Wang
Zhongnan Hospital of Wuhan University
Career Start Year 2002
Number of shared co-authors 17
Katherine S Pollard
Gladstone Institutes
Career Start Year 2002
Number of shared co-authors 26
Nathan D Price
Institute for Systems Biology
Career Start Year 2002
Number of shared co-authors 14
Scott J Emrich
The Pennsylvania State University College of Medicine
Career Start Year 2002
Number of shared co-authors 3
Jeong-Hyeon Choi
National Marine Biodiversity Institute of Korea
Career Start Year 2000
Number of shared co-authors 4
Ana Conesa
Institute for Integrative Systems Biology, Spanish National Research Council (CSIC)
Career Start Year 2000
Number of shared co-authors 7
Weizhong Li
J. Craig Venter Institute
Career Start Year 2000
Number of shared co-authors 3
David R Powell
Biomedicine Discovery Institute, Monash University
Career Start Year 1998
Number of shared co-authors 1

Collaborators

Peer Bork
University of Wurzburg
Co-authored papers 36
Gunnar R??tsch
ETH Zurich
Co-authored papers 16
Paul I Costea
Weizmann Institute of Science
Co-authored papers 11
Manimozhiyan Arumugam
Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen
Co-authored papers 8
Takuji Yamada
Tokyo Institute of Technology
Co-authored papers 6
Murat Iskar
Friedrich Miescher Institute for Biomedical Research
Co-authored papers 6
Vera van Noort
Leiden University, Institute of Biology Leiden
Co-authored papers 6
Jeroen Raes
KU Leuven - University of Leuven
Co-authored papers 5
Nicola Segata
University of Trento
Co-authored papers 5
Athanasios Typas
University of California san francisco
Co-authored papers 4
Curtis Huttenhower
Broad Institute of MIT and Harvard
Co-authored papers 4
Edoardo Pasolli
University of Naples Federico II
Co-authored papers 4
Timo Sachsenberg
Institute for Bioinformatics and Medical Informatics, University of Tubingen
Co-authored papers 4
Levi Waldron
City University of New York School of Public Health
Co-authored papers 4
Tatsuhiro Shibata
Kurume University School of Medicine
Co-authored papers 3
Francesco Beghini
University of Trento
Co-authored papers 3
Frederic D Bushman
Perelman School of Medicine, University of Pennsylvania
Co-authored papers 3
Martin Larralde
Ecole Normale Superieure Paris-Saclay
Co-authored papers 3
Rob Knight
University of California
Co-authored papers 3
Dan Knights
University of Minnesota
Co-authored papers 3
Kristoffer Forslund
Max Delbruck Center for Molecular Medicine (MDC)
Co-authored papers 3
Rudolf Kaaks
Co-authored papers 3
Emmanuel Dias-Neto
A.C. Camargo Cancer Center
Co-authored papers 2
Paul Wilmes
University of Luxembourg
Co-authored papers 2
Jean Weissenbach
Institut Francois Jacob, CNRS, Universite Paris-Saclay
Co-authored papers 2
Jo??o C Setubal
Chemistry Institute, Universidade de Sao Paulo - USP
Co-authored papers 2
Eran Segal
Weizmann Institute of Science
Co-authored papers 2
Ivica Letunic
Co-authored papers 2
Antonia Trichopoulou
Co-authored papers 2
S??ren Brunak
Novo Nordisk Foundation Center for Protein Research, University of Copenhagen
Co-authored papers 2
Release 1.2