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Author Details

Assen Roguev
University of California, USA Quantitative Biosciences Institute (QBI) san francisco
2000
47
27
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
32620695Correction: Thioredoxin-related protein 32 is an arsenite-regulated thiol reductase of the proteasome 19 S particle.J Biol Chem2020
32084337A Quantitative Genetic Interaction Map of HIV Infection.Mol Cell2020
30842216The Set1 complex is dimeric and acts with Jhd2 demethylation to convey symmetrical H3K4 trimethylation.Genes Dev2019
28733394Genetic Interaction Mapping in <i>Schizosaccharomyces pombe</i> Using the Pombe Epistasis Mapper (PEM) System and a ROTOR HDA Colony Replicating Robot in a 1536 Array Format.Cold Spring Harb Protoc2018
29127264Protein Moonlighting Revealed by Noncatalytic Phenotypes of Yeast Enzymes.Genetics2018
28733411DNA Preparation from <i>Schizosaccharomyces pombe</i>.Cold Spring Harb Protoc2018
28733406Genetic Interaction Score (S-Score) Calculation, Clustering, and Visualization of Genetic Interaction Profiles for Yeast.Cold Spring Harb Protoc2018
28733404High-Throughput Quantitative Genetic Interaction Mapping in the Fission Yeast <i>Schizosaccharomyces pombe</i>.Cold Spring Harb Protoc2018
28733397Transformation of <i>Schizosaccharomyces pombe</i> in a 96-Well Format.Cold Spring Harb Protoc2018
28319113Combinatorial CRISPR-Cas9 screens for de novo mapping of genetic interactions.Nat Methods2017
28481362Genetic interaction mapping in mammalian cells using CRISPR interference.Nat Methods2017
25795664Genetic Interaction Landscape Reveals Critical Requirements for Schizosaccharomyces pombe Brc1 in DNA Damage Response Mutants.G3 (Bethesda)2015
27135800Systems Analyses Reveal Shared and Diverse Attributes of Oct4 Regulation in Pluripotent Cells.Cell Syst2015
25825871Genetic interaction mapping reveals a role for the SWI/SNF nucleosome remodeler in spliceosome activation in fission yeast.PLoS Genet2015
24497846A chaperone-assisted degradation pathway targets kinetochore proteins to ensure genome stability.PLoS Genet2014
25302077Evolutionarily conserved genetic interactions with budding and fission yeast MutS identify orthologous relationships in mismatch repair-deficient cancer cells.Genome Med2014
24957674Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts.EMBO Rep2014
24565511Identification of a BET family bromodomain/casein kinase II/TAF-containing complex as a regulator of mitotic condensin function.Cell Rep2014
24434583A Pil1-Sle1-Syj1-Tax4 functional pathway links eisosomes with PI(4,5)P2 regulation.J Cell Sci2014
23407553Quantitative genetic-interaction mapping in mammalian cells.Nat Methods2013
22200500Hho1p, the linker histone of Saccharomyces cerevisiae, is important for the proper chromatin organization in vivo.Biochim Biophys Acta2012
22927644Replication fork collapse and genome instability in a deoxycytidylate deaminase mutant.Mol Cell Biol2012
22681890Hierarchical modularity and the evolution of genetic interactomes across species.Mol Cell2012
21504829Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex.Mol Cell2011
20946812Quantitative genetic interaction mapping using the E-MAP approach.Methods Enzymol2010
19547744Evolution of phosphoregulation: comparison of phosphorylation patterns across yeast species.PLoS Biol2009
19915592An acetylated form of histone H2A.Z regulates chromosome architecture in Schizosaccharomyces pombe.Nat Struct Mol Biol2009
19911051The Schizosaccharomyces pombe JmjC-protein, Msc1, prevents H2A.Z localization in centromeric and subtelomeric chromatin domains.PLoS Genet2009
19349280Thioredoxin-related Protein 32 is an arsenite-regulated Thiol Reductase of the proteasome 19 S particle.J Biol Chem2009
18446155BAC to the future: functional genomics in mammals.Nat Methods2008
18818364Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast.Science2008
19040720Chromatin Central: towards the comparative proteome by accurate mapping of the yeast proteomic environment.Genome Biol2008
17473877SIN-fully silent: HDAC complexes in fission yeast.Nat Struct Mol Biol2007
17893680High-throughput genetic interaction mapping in the fission yeast Schizosaccharomyces pombe.Nat Methods2007
17314980Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map.Nature2007
17356699Stability of mRNA/DNA and DNA/DNA duplexes affects mRNA transcription.PLoS One2007
17389396CCR4/NOT complex associates with the proteasome and regulates histone methylation.Proc Natl Acad Sci U S A2007
16921172Protein interactions within the Set1 complex and their roles in the regulation of histone 3 lysine 4 methylation.J Biol Chem2006
16990816A recombineering pipeline for functional genomics applied to Caenorhabditis elegans.Nat Methods2006
15755447Uncoupling of unwinding from DNA synthesis implies regulation of MCM helicase by Tof1/Mrc1/Csm3 checkpoint complex.J Mol Biol2005
14617822A comparative analysis of an orthologous proteomic environment in the yeasts Saccharomyces cerevisiae and Schizosaccharomyces pombe.Mol Cell Proteomics2004
12488447High conservation of the Set1/Rad6 axis of histone 3 lysine 4 methylation in budding and fission yeasts.J Biol Chem2003
12736296The histone 3 lysine 36 methyltransferase, SET2, is involved in transcriptional elongation.Nucleic Acids Res2003
12096120Deciphering protein complexes and protein interaction networks by tandem affinity purification and mass spectrometry: analytical perspective.Mol Cell Proteomics2002
11742990The Saccharomyces cerevisiae Set1 complex includes an Ash2 homologue and methylates histone 3 lysine 4.EMBO J2001
11711434The S. cerevisiae SET3 complex includes two histone deacetylases, Hos2 and Hst1, and is a meiotic-specific repressor of the sporulation gene program.Genes Dev2001
11112279Two-wavelength fluorescence assay for DNA repair.Anal Biochem2000
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Center for Molecular and Cellular Bioengineering, Technische Universitat Dresden
Co-authored papers 12
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Co-authored papers 10
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Wonju Severance Christian Hospital
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EpiCypher Inc.
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Co-authored papers 4
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Co-authored papers 4
College Street, University of Toronto
Co-authored papers 3
Toronto Metropolitan University
Co-authored papers 3
Conway Institute of Biomedical and Biomolecular Sciences, University College Dublin
Co-authored papers 3
Albert Einstein College of Medicine
Co-authored papers 3
The Francis Crick Institute
Co-authored papers 2
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Neuroscience Institute, NYU Grossman School of Medicine
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