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Author Details

David Haussler
Genomics Institute, University of California Santa Cruz
1986
259
120
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37953330The UCSC Genome Browser database: 2024 update.Nucleic Acids Res2024
37953330The UCSC Genome Browser database: 2024 update.Nucleic Acids Res2024
36335802The children's brain tumor network (CBTN) - Accelerating research in pediatric central nervous system tumors through collaboration and open science.Neoplasia2023
36335802The children's brain tumor network (CBTN) - Accelerating research in pediatric central nervous system tumors through collaboration and open science.Neoplasia2023
36420891The UCSC Genome Browser database: 2023 update.Nucleic Acids Res2023
38016807Internet-Connected Cortical Organoids for Project-Based Stem Cell and Neuroscience Education.eNeuro2023
36909548Unraveling Neuronal Identities Using SIMS: A Deep Learning Label Transfer Tool for Single-Cell RNA Sequencing Analysis.bioRxiv2023
37333381A non-oscillatory, millisecond-scale embedding of brain state provides insight into behavior.bioRxiv2023
37205466Open-loop lab-on-a-chip technology enables remote computer science training in Latinx life sciences students.bioRxiv2023
37131629Isoform-specific translational control is evolutionarily conserved in primates.bioRxiv2023
38016807Internet-Connected Cortical Organoids for Project-Based Stem Cell and Neuroscience Education.eNeuro2023
37205466Open-loop lab-on-a-chip technology enables remote computer science training in Latinx life sciences students.bioRxiv2023
37333381A non-oscillatory, millisecond-scale embedding of brain state provides insight into behavior.bioRxiv2023
37131629Isoform-specific translational control is evolutionarily conserved in primates.bioRxiv2023
36909548Unraveling Neuronal Identities Using SIMS: A Deep Learning Label Transfer Tool for Single-Cell RNA Sequencing Analysis.bioRxiv2023
36420891The UCSC Genome Browser database: 2023 update.Nucleic Acids Res2023
33970362Cancer microenvironment and genomics: evolution in process.Clin Exp Metastasis2022
35962045Author Correction: Comparative and demographic analysis of orang-utan genomes.Nature2022
35444317The Human Pangenome Project: a global resource to map genomic diversity.Nature2022
35952714Pandemic-scale phylogenomics reveals the SARS-CoV-2 recombination landscape.Nature2022
35483961A complete pedigree-based graph workflow for rare candidate variant analysis.Genome Res2022
36439758Cloud-controlled microscopy enables remote project-based biology education in underserved Latinx communities.Heliyon2022
36418910Modular automated microfluidic cell culture platform reduces glycolytic stress in cerebral cortex organoids.Sci Rep2022
36513728Machine learning multi-omics analysis reveals cancer driver dysregulation in pan-cancer cell lines compared to primary tumors.Commun Biol2022
37383277IoT cloud laboratory: Internet of Things architecture for cellular biology.Internet Things (Amst)2022
33970362Cancer microenvironment and genomics: evolution in process.Clin Exp Metastasis2022
35332097A hidden layer of structural variation in transposable elements reveals potential genetic modifiers in human disease-risk loci.Genome Res2022
35042800The Earth BioGenome Project 2020: Starting the clock.Proc Natl Acad Sci U S A2022
34718705The UCSC Genome Browser database: 2022 update.Nucleic Acids Res2022
35444317The Human Pangenome Project: a global resource to map genomic diversity.Nature2022
35483961A complete pedigree-based graph workflow for rare candidate variant analysis.Genome Res2022
37383277IoT cloud laboratory: Internet of Things architecture for cellular biology.Internet Things (Amst)2022
36513728Machine learning multi-omics analysis reveals cancer driver dysregulation in pan-cancer cell lines compared to primary tumors.Commun Biol2022
36439758Cloud-controlled microscopy enables remote project-based biology education in underserved Latinx communities.Heliyon2022
36418910Modular automated microfluidic cell culture platform reduces glycolytic stress in cerebral cortex organoids.Sci Rep2022
35962045Author Correction: Comparative and demographic analysis of orang-utan genomes.Nature2022
35952714Pandemic-scale phylogenomics reveals the SARS-CoV-2 recombination landscape.Nature2022
35042800The Earth BioGenome Project 2020: Starting the clock.Proc Natl Acad Sci U S A2022
35332097A hidden layer of structural variation in transposable elements reveals potential genetic modifiers in human disease-risk loci.Genome Res2022
34718705The UCSC Genome Browser database: 2022 update.Nucleic Acids Res2022
33221922The UCSC Genome Browser database: 2021 update.Nucleic Acids Res2021
33972780Ultrafast Sample placement on Existing tRees (UShER) enables real-time phylogenetics for the SARS-CoV-2 pandemic.Nat Genet2021
33911273Towards complete and error-free genome assemblies of all vertebrate species.Nature2021
33851162A new SARS-CoV-2 lineage that shares mutations with known Variants of Concern is rejected by automated sequence repository quality control.bioRxiv2021
33833441Author Correction: Dense sampling of bird diversity increases power of comparative genomics.Nature2021
33821270A daily-updated database and tools for comprehensive SARS-CoV-2 mutation-annotated trees.bioRxiv2021
33712853The case for using mapped exonic non-duplicate reads when reporting RNA-sequencing depth: examples from pediatric cancer datasets.Gigascience2021
33221922The UCSC Genome Browser database: 2021 update.Nucleic Acids Res2021
34737378Picroscope: low-cost system for simultaneous longitudinal biological imaging.Commun Biol2021
34914532Pangenomics enables genotyping of known structural variants in 5202 diverse genomes.Science2021
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Collaborators

William James Kent
Co-authored papers 70
Mark Diekhans
Genomics Institute, University of California Santa Cruz
Co-authored papers 55
Benedict Paten
UC Santa Cruz Genomics Institute, University of California
Co-authored papers 40
Angie S Hinrichs
Co-authored papers 40
Robert M Kuhn
Genomics Institute, University of California Santa Cruz
Co-authored papers 37
Donna Karolchik
Co-authored papers 36
Kate R Rosenbloom
Co-authored papers 35
Hiram Clawson
Co-authored papers 34
Sofie R Salama
Genomics Institute, University of California Santa Cruz
Co-authored papers 33
Ann S Zweig
Co-authored papers 31
Webb Miller
Co-authored papers 26
Galt P Barber
Genomics Institute, University of California Santa Cruz
Co-authored papers 26
Adam Siepel
Co-authored papers 22
Robert Baertsch
Center for Biomolecular Science and Engineering, University of California
Co-authored papers 21
Rachel A Harte
Co-authored papers 20
Melissa S Cline
Genomics Institute, University of California Santa Cruz
Co-authored papers 19
Maximilian Haeussler
Genomics Institute, University of California Santa Cruz
Co-authored papers 18
Richard K Wilson
The Ohio State University
Co-authored papers 18
Jingchun Zhu
University of California at Santa Cruz
Co-authored papers 17
Richard A Gibbs
Baylor College of Medicine
Co-authored papers 17
Terrence S Furey
University of North Carolina at Chapel Hill
Co-authored papers 17
Katrina Learned
Co-authored papers 16
Evan E Eichler
University of Washington
Co-authored papers 15
Marco A Marra
University of British Columbia
Co-authored papers 14
Sol Katzman
Co-authored papers 14
Joshua M Stuart
University of California at Santa Cruz
Co-authored papers 14
Brooke Rhead
Co-authored papers 14
Arian F A Smit
Co-authored papers 13
Brian T Lee
Genomics Institute, University of California Santa Cruz
Co-authored papers 13
Kayla E Smith
Co-authored papers 12
Release 1.2