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Author Details
Full Name
Carol L Thompson
Affiliation
Allen Institute for Brain Science
ORCID
Career Start Year
1999
Papers
34
H Index
23
Expertise
CM4AI Collaborator
PMID
Paper Title
Journal Title
Published Year
37034735
A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain.
bioRxiv
2023
38092916
A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain.
Nature
2023
37390046
A guide to the BRAIN Initiative Cell Census Network data ecosystem.
PLoS Biol
2023
37034735
A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain.
bioRxiv
2023
38092916
A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain.
Nature
2023
37390046
A guide to the BRAIN Initiative Cell Census Network data ecosystem.
PLoS Biol
2023
35377797
Single cell enhancer activity distinguishes GABAergic and cholinergic lineages in embryonic mouse basal ganglia.
Proc Natl Acad Sci U S A
2022
35377797
Single cell enhancer activity distinguishes GABAergic and cholinergic lineages in embryonic mouse basal ganglia.
Proc Natl Acad Sci U S A
2022
33473216
Survey of spiking in the mouse visual system reveals functional hierarchy.
Nature
2021
33473216
Survey of spiking in the mouse visual system reveals functional hierarchy.
Nature
2021
34921112
Transcriptional network orchestrating regional patterning of cortical progenitors.
Proc Natl Acad Sci U S A
2021
34921112
Transcriptional network orchestrating regional patterning of cortical progenitors.
Proc Natl Acad Sci U S A
2021
31844315
A large-scale standardized physiological survey reveals functional organization of the mouse visual cortex.
Nat Neurosci
2020
31844315
A large-scale standardized physiological survey reveals functional organization of the mouse visual cortex.
Nat Neurosci
2020
31042712
Biological variation in the sizes, shapes and locations of visual cortical areas in the mouse.
PLoS One
2019
31042712
Biological variation in the sizes, shapes and locations of visual cortical areas in the mouse.
PLoS One
2019
28932809
Aberrant Cortical Activity in Multiple GCaMP6-Expressing Transgenic Mouse Lines.
eNeuro
2017
28932809
Aberrant Cortical Activity in Multiple GCaMP6-Expressing Transgenic Mouse Lines.
eNeuro
2017
29144976
Single-Cell Profiling of an In Vitro Model of Human Interneuron Development Reveals Temporal Dynamics of Cell Type Production and Maturation.
Neuron
2017
28279351
Single-Cell Profiling of an In Vitro Model of Human Interneuron Development Reveals Temporal Dynamics of Cell Type Production and Maturation.
Neuron
2017
28094016
A Single-Cell Roadmap of Lineage Bifurcation in Human ESC Models of Embryonic Brain Development.
Cell Stem Cell
2017
28279351
Single-Cell Profiling of an In Vitro Model of Human Interneuron Development Reveals Temporal Dynamics of Cell Type Production and Maturation.
Neuron
2017
28094016
A Single-Cell Roadmap of Lineage Bifurcation in Human ESC Models of Embryonic Brain Development.
Cell Stem Cell
2017
29144976
Single-Cell Profiling of an In Vitro Model of Human Interneuron Development Reveals Temporal Dynamics of Cell Type Production and Maturation.
Neuron
2017
24952961
A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain.
Neuron
2014
24952961
A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain.
Neuron
2014
24991954
CORTECON: a temporal transcriptome analysis of in vitro human cerebral cortex development from human embryonic stem cells.
Neuron
2014
24991954
CORTECON: a temporal transcriptome analysis of in vitro human cerebral cortex development from human embryonic stem cells.
Neuron
2014
23193282
Allen Brain Atlas: an integrated spatio-temporal portal for exploring the central nervous system.
Nucleic Acids Res
2013
23193282
Allen Brain Atlas: an integrated spatio-temporal portal for exploring the central nervous system.
Nucleic Acids Res
2013
21491433
Cell-type-specific consequences of Reelin deficiency in the mouse neocortex, hippocampus, and amygdala.
J Comp Neurol
2011
21491433
Cell-type-specific consequences of Reelin deficiency in the mouse neocortex, hippocampus, and amygdala.
J Comp Neurol
2011
21088695
Molecular and anatomical signatures of sleep deprivation in the mouse brain.
Front Neurosci
2010
21088695
Molecular and anatomical signatures of sleep deprivation in the mouse brain.
Front Neurosci
2010
18366675
Exploration and visualization of gene expression with neuroanatomy in the adult mouse brain.
BMC Bioinformatics
2008
19109908
Genomic anatomy of the hippocampus.
Neuron
2008
18614689
Sleep deprivation effects on circadian clock gene expression in the cerebral cortex parallel electroencephalographic differences among mouse strains.
J Neurosci
2008
18234097
Quantitative methods for genome-scale analysis of in situ hybridization and correlation with microarray data.
Genome Biol
2008
18366675
Exploration and visualization of gene expression with neuroanatomy in the adult mouse brain.
BMC Bioinformatics
2008
19109908
Genomic anatomy of the hippocampus.
Neuron
2008
18614689
Sleep deprivation effects on circadian clock gene expression in the cerebral cortex parallel electroencephalographic differences among mouse strains.
J Neurosci
2008
18234097
Quantitative methods for genome-scale analysis of in situ hybridization and correlation with microarray data.
Genome Biol
2008
17151600
Genome-wide atlas of gene expression in the adult mouse brain.
Nature
2007
17151600
Genome-wide atlas of gene expression in the adult mouse brain.
Nature
2007
16790549
Posttranslational regulation of the mammalian circadian clock by cryptochrome and protein phosphatase 5.
Proc Natl Acad Sci U S A
2006
16790549
Posttranslational regulation of the mammalian circadian clock by cryptochrome and protein phosphatase 5.
Proc Natl Acad Sci U S A
2006
17109754
Wildtype epidermal growth factor receptor (Egfr) is not required for daily locomotor or masking behavior in mice.
J Circadian Rhythms
2006
17109754
Wildtype epidermal growth factor receptor (Egfr) is not required for daily locomotor or masking behavior in mice.
J Circadian Rhythms
2006
15010208
Further evidence for the role of cryptochromes in retinohypothalamic photoreception/phototransduction.
Brain Res Mol Brain Res
2004
15523112
Effect of vitamin A depletion on nonvisual phototransduction pathways in cryptochromeless mice.
J Biol Rhythms
2004
1 - 50 of 68
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row(s) 1 - 30 of 30
Collaborators
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Allen Institute for Brain Science
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Allen Institute for Brain Science
Co-authored papers
13
Ed S Lein
Allen Institute for Brain Science
Co-authored papers
9
Hongkui Zeng
Allen Institute for Brain Science
Co-authored papers
8
Tim Dolbeare
Allen Institute for Brain Science
Co-authored papers
6
Amy Bernard
The Kavli Foundation
Co-authored papers
6
Zizhen Yao
Allen Institute for Brain Science
Co-authored papers
6
Russell N Van Gelder
University of Washington School of Medicine
Co-authored papers
4
Tim P Fliss
Allen Institute for Brain Science
Co-authored papers
3
John L R Rubenstein
UCSF Medical School
Co-authored papers
3
Kate Roll
Co-authored papers
3
Jeremy A Miller
Co-authored papers
3
Cindy T J van Velthoven
Allen Institute for Brain Science
Co-authored papers
3
Athena R Ypsilanti
UCSF Weill Institute for Neurosciences, University of California san francisco
Co-authored papers
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Axel Visel
Co-authored papers
2
Keith Baker
Allen Institute for Brain Science
Co-authored papers
2
Trygve E Bakken
Allen Institute for Brain Science
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2
Xiaowei Zhuang
Howard Hughes Medical Institute, Harvard University
Co-authored papers
2
Anish Bhaswanth Chakka
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Alex S Nord
UC Davis Center for Neuroscience.
Co-authored papers
2
Christof Koch
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Jeff Goldy
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