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Author Details

Mitsuyoshi Murata
Center for Integrative Medical Sciences
2007
19
13
PMIDPaper TitleJournal TitlePublished Year
35961773Deep sequencing of short capped RNAs reveals novel families of noncoding RNAs.Genome Res2022
35387384High quality genome assembly of the anhydrobiotic midge provides insights on a single chromosome-based emergence of extreme desiccation tolerance.NAR Genom Bioinform2022
36577377Antisense-oligonucleotide-mediated perturbation of long non-coding RNA reveals functional features in stem cells and across cell types.Cell Rep2022
34078885Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network.Nat Commun2021
32124327Cap Analysis of Gene Expression (CAGE): A Quantitative and Genome-Wide Assay of Transcription Start Sites.Methods Mol Biol2020
28850106FANTOM5 CAGE profiles of human and mouse samples.Sci Data2017
28211732Time-Reversal Measurement of the p-Wave Cross Sections of the ^{7}Be(n,α)^{4}He Reaction for the Cosmological Li Problem.Phys Rev Lett2017
25678556Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells.Science2015
24676093Comparison of CAGE and RNA-seq transcriptome profiling using clonally amplified and single-molecule next-generation sequencing.Genome Res2014
24927836Detecting expressed genes using CAGE.Methods Mol Biol2014
24670764A promoter-level mammalian expression atlas.Nature2014
21938627CAGE (cap analysis of gene expression): a protocol for the detection of promoter and transcriptional networks.Methods Mol Biol2012
223621605' end-centered expression profiling using cap-analysis gene expression and next-generation sequencing.Nat Protoc2012
19074369Genome-wide detection and analysis of hippocampus core promoters using DeepCAGE.Genome Res2009
20041857Tunable fractionation of nucleic acids.Biotechniques2009
19377478Tiny RNAs associated with transcription start sites in animals.Nat Genet2009
19377474The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line.Nat Genet2009
18611171Development of a DNA barcode tagging method for monitoring dynamic changes in gene expression by using an ultra high-throughput sequencer.Biotechniques2008
18043742Gene organization in rice revealed by full-length cDNA mapping and gene expression analysis through microarray.PLoS One2007
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Collaborators

Piero Carninci
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Hiromi Nishiyori
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Co-authored papers 14
Yoshihide Hayashizaki
Center for Integrative Medical Sciences
Co-authored papers 12
Miki Kojima
Center for Infectious Disease and Vaccine Research, La Jolla Institute for Immunology
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Masayoshi Itoh
RIKEN Center for Integrative Medical Sciences
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Michihira Tagami
RIKEN Center for Integrative Medical Sciences
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Harukazu Suzuki
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Co-authored papers 8
Carsten O Daub
International Institute of Molecular and Cell Biology in Warsaw
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Shiro Fukuda
Graduate School of Medicine, Osaka University
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Jun Kawai
RIKEN Center for Integrative Medical Sciences
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Alistair R R Forrest
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Hideya Kawaji
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Takahiro Arakawa
Tokyo University of Technology
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Jessica Severin
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Shohei Noma
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Dave S B Hoon
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Timo Lassmann
Telethon Kids Institute, University of Western Australia
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Sachi Kato
RIKEN Center for Life Science Technologies
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David A Hume
Mater Research Institute-UQ, Translational Research Institute
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Noriko Ninomiya
Japan Tobacco Inc.
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Valerio Orlando
King Abdullah University of Science and Technology (KAUST)
Co-authored papers 5
Christine A Wells
The University of Melbourne
Co-authored papers 5
Takeya Kasukawa
RIKEN Center for Integrative Medical Sciences
Co-authored papers 5
Geoffrey J Faulkner
Mater Research Institute - University of Queensland
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Marina Lizio
Cerevance Ltd
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Jay W Shin
Genome Institute of Singapore (GIS)
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Akira Hasegawa
RIKEN Center for Integrative Medical Sciences
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Sayaka Nagao-Sato
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Yasushi Okazaki
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