Author details

Full Name

James Vlasblom

Affiliation

University of Regina

ORCID

Career Start Year

2006

Papers

H Index

Expertise

CM4AI Collaborator

Nevan J Krogan (CM4AI)

PMID	Paper Title	Journal Title	Published Year
36368308	Genomic architecture of autism from comprehensive whole-genome sequence annotation.	Cell	2022
31536960	Rewiring of the Human Mitochondrial Interactome during Neuronal Reprogramming Reveals Regulators of the Respirasome and Neurogenesis.	iScience	2019
29176613	Global landscape of cell envelope protein complexes in Escherichia coli.	Nat Biotechnol	2018
28903051	Features of the Chaperone Cellular Network Revealed through Systematic Interaction Mapping.	Cell Rep	2017
29128334	A Map of Human Mitochondrial Protein Interactions Linked to Neurodegeneration Reveals New Mechanisms of Redox Homeostasis and NF-ÎºB Signaling.	Cell Syst	2017
26774489	Conditional Epistatic Interaction Maps Reveal Global Functional Rewiring of Genome Integrity Pathways in Escherichia coli.	Cell Rep	2016
25367773	Mitochondrial targets for pharmacological intervention in human disease.	J Proteome Res	2015
26621466	Quantitative and Systems-Based Approaches for Deciphering Bacterial Membrane Interactome and Gene Function.	Adv Exp Med Biol	2015
25963654	Spindle Checkpoint Factors Bub1 and Bub2 Promote DNA Double-Strand Break Repair by Nonhomologous End Joining.	Mol Cell Biol	2015
25782749	Extracting high confidence protein interactions from affinity purification data: at the crossroads.	J Proteomics	2015
25546499	Yeast mitochondrial protein-protein interactions reveal diverse complexes and disease-relevant functional relationships.	J Proteome Res	2015
25316676	Novel function discovery with GeneMANIA: a new integrated resource for gene function prediction in Escherichia coli.	Bioinformatics	2015
24262152	Exploring mitochondrial system properties of neurodegenerative diseases through interactome mapping.	J Proteomics	2014
24586182	Quantitative genome-wide genetic interaction screens reveal global epistatic relationships of protein complexes in Escherichia coli.	PLoS Genet	2014
24561554	The binary protein-protein interaction landscape of Escherichia coli.	Nat Biotechnol	2014
24007795	Protein-protein interaction networks: the puzzling riches.	Curr Opin Struct Biol	2013
22939629	A census of human soluble protein complexes.	Cell	2012
22940862	Interaction landscape of membrane-protein complexes in Saccharomyces cerevisiae.	Nature	2012
21257609	OrthoNets: simultaneous visual analysis of orthologs and their interaction neighborhoods across different organisms.	Bioinformatics	2011
22125496	Genetic interaction maps in Escherichia coli reveal functional crosstalk among cell envelope biogenesis pathways.	PLoS Genet	2011
21863499	High-throughput analyses and curation of protein interactions in yeast.	Methods Mol Biol	2011
20940177	iRefWeb: interactive analysis of consolidated protein interaction data and their supporting evidence.	Database (Oxford)	2010
21124763	Expanding the landscape of chromatin modification (CM)-related functional domains and genes in human.	PLoS One	2010
18799807	Challenges and rewards of interaction proteomics.	Mol Cell Proteomics	2009
19331680	Markov clustering versus affinity propagation for the partitioning of protein interaction graphs.	BMC Bioinformatics	2009
18718945	Local coherence in genetic interaction patterns reveals prevalent functional versatility.	Bioinformatics	2008
17370254	Identifying functional modules in the physical interactome of Saccharomyces cerevisiae.	Proteomics	2007
16554755	Global landscape of protein complexes in the yeast Saccharomyces cerevisiae.	Nature	2006
16921162	GenePro: a Cytoscape plug-in for advanced visualization and analysis of interaction networks.	Bioinformatics	2006

1 - 29 of 29

Janusz Dutkowski

Data4Cure Inc.

Career Start Year 2007

Number of shared co-authors 2

Atanas Kamburov

Broad Institute of Harvard and MIT

Career Start Year 2007

Number of shared co-authors 2

Fidel Ram??rez

Max Planck Institute of Immunobiology and Epigenetics

Career Start Year 2007

Number of shared co-authors 0

Silpa Suthram

Stanford Center for Biomedical Informatics Research, Stanford University

Career Start Year 2005

Number of shared co-authors 2

Hannes Braberg

University of California San Francisco

Career Start Year 2004

Number of shared co-authors 5

Michael Riffle

University of Washington

Career Start Year 2003

Number of shared co-authors 1

Vera van Noort

Leiden University, Institute of Biology Leiden

Career Start Year 2003

Number of shared co-authors 1

Mario Albrecht

Institute for Knowledge Discovery, Graz University of Technology

Career Start Year 2002

Number of shared co-authors 5

Roland Krause

University of Luxembourg

Career Start Year 2002

Number of shared co-authors 1

Pablo Porras

European Bioinformatics Institute (EMBL-EBI)

Career Start Year 2002

Number of shared co-authors 3

Madan Mohan Babu

St. Jude Children's Research Hospital

Career Start Year 2002

Number of shared co-authors 7

Dmitry Korkin

Worcester Polytechnic Institute

Career Start Year 2002

Number of shared co-authors 3

Lorrie Boucher

The Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital

Career Start Year 2001

Number of shared co-authors 3

Bobby-Joe Breitkreutz

The Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital

Career Start Year 2001

Number of shared co-authors 2

Roded Sharan

Tel Aviv University

Career Start Year 2000

Number of shared co-authors 3

Frederick P Roth

University of Toronto

Career Start Year 1998

Number of shared co-authors 21

Lars Juhl Jensen

Novo Nordisk Foundation Center for Protein Research, University of Copenhagen

Career Start Year 1998

Number of shared co-authors 4

Benno Schwikowski

Center for Bioinformatics, Institut Pasteur CNRS

Career Start Year 1997

Number of shared co-authors 3

Trey Ideker (CM4AI)

University of California San Diego

Career Start Year 1996

Number of shared co-authors 13

Yu Xia

College of Information Engineering, Zhejiang University of Technology

Career Start Year 1996

Number of shared co-authors 8

Lukasz Salwinski

university of california los angeles

Career Start Year 1995

Number of shared co-authors 9

Kara Dolinski

Lewis-Sigler Institute for Integrative Genomics, Princeton University

Career Start Year 1994

Number of shared co-authors 3

Bianca Habermann

Aix Marseille University, CNRS, Turing Center for Living Systems

Career Start Year 1993

Number of shared co-authors 1

Jason E McDermott

Pacific Northwest National Laboratory

Career Start Year 1993

Number of shared co-authors 0

Joel S Bader

Johns Hopkins University

Career Start Year 1993

Number of shared co-authors 9

Marc R Wilkins

University of New South Wales

Career Start Year 1992

Number of shared co-authors 0

Martijn A Huynen

Radboud University Medical Centre Nijmegen

Career Start Year 1992

Number of shared co-authors 0

Erik L L Sonnhammer

Stockholm University

Career Start Year 1992

Number of shared co-authors 1

Marc Vidal

Blavatnik Institute, Harvard Medical School

Career Start Year 1989

Number of shared co-authors 13

Alfonso Valencia

Josep Carreras Leukaemia Research Institute (IJC)

Career Start Year 1986

Number of shared co-authors 11

row(s) 1 - 30 of 30

Mohan Babu

University of Regina

Co-authored papers 16

Shoshana J Wodak

VIB-VUB Center for Structural Biology

Co-authored papers 15

Sadhna Phanse

University of Regina

Co-authored papers 15

Andrew Emili

Boston University School of Medicine, Boston University

Co-authored papers 12

Jack F Greenblatt

College Street, University of Toronto

Co-authored papers 11

Shuye Pu

College Street, University of Toronto

Co-authored papers 11

Ashwani Kumar

Bhabha Atomic Research Centre

Co-authored papers 8

Zoran Minic

University of Ottawa

Co-authored papers 7

John Parkinson

The Hospital for Sick Children

Co-authored papers 7

Viktor Deineko

University of Northern British Columbia

Co-authored papers 7

Ashkan Golshani

Ottawa Institute of Systems Biology, Carleton University

Co-authored papers 6

Hiroyuki Aoki

University of Regina

Co-authored papers 6

Alla Gagarinova

University of Regina

Co-authored papers 6

Ramy H Malty

University of Toronto, University of Regina

Co-authored papers 5

Matthew Jessulat

University of Regina

Co-authored papers 5

Ke Jin

West China Hospital, Sichuan University

Co-authored papers 5

Zhaolei Zhang

University of Toronto

Co-authored papers 4

Bahram Samanfar

Agriculture and Agri-Food Canada

Co-authored papers 3

Gary D Bader

University of Toronto

Co-authored papers 3

Bhanu Prasad Venkatesulu

Loyola University, Illinois Edward Hines Veteran Affairs Hospital

Co-authored papers 3

Qingzhou Zhang

Sprott Center for Stem Cell Research, Ottawa Hospital Research Institute

Co-authored papers 3

Walid A Houry

University of Toronto

Co-authored papers 3

Patrick Aloy

Institucio Catalana de Recerca i Estudis Avancats (ICREA)

Co-authored papers 3

Mohsen Hooshyar

Department of Biology and Ottawa Institute of Systems Biology, Carleton University

Co-authored papers 3

Cedoljub Bundalovic-Torma

University of Toronto

Co-authored papers 3

Thanuja Punna

Co-authored papers 2

Samuel Wu

Co-authored papers 2

Haiyuan Yu

Weill Institute for Cell and Molecular Biology, Cornell University

Co-authored papers 2

Seesandra V Rajagopala

Vanderbilt University Medical Center

Co-authored papers 2

Nevan J Krogan (CM4AI)

University of California San Francisco

Co-authored papers 2

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