Author details

Full Name

Jaroslav Bendl

Affiliation

ORCID

Career Start Year

1958

Papers

115

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37454787	Activity-Dependent Transcriptional Program in NGN2+ Neurons Enriched for Genetic Risk for Brain-Related Disorders.	Biol Psychiatry	2024
37515770	The stability of the myelinating oligodendrocyte transcriptome is regulated by the nuclear lamina.		2023
37824614	Multi-omic profiling of the developing human cerebral cortex at the single-cell level.		2023
37811875	Lineage specific 3D genome structure in the adult human brain and neurodevelopmental changes in the chromatin interactome.		2023
37904203	DeepGAMI: deep biologically guided auxiliary learning for multimodal integration and imputation to improve genotype-phenotype prediction.	Genome Med	2023
37886514	The neuronal chromatin landscape in adult schizophrenia brains is linked to early fetal development.	Res Sq	2023
37873320	The neuronal chromatin landscape in adult schizophrenia brains is linked to early fetal development.	medRxiv	2023
37961404	A public resource of single cell transcriptomes and multiscale networks from persons with and without Alzheimer's disease.	bioRxiv	2023
37550530	Genome-wide analysis of a model-derived binge eating disorder phenotype identifies risk loci and implicates iron metabolism.	Nat Genet	2023
37684260	Multi-omic atlas of the parahippocampal gyrus in Alzheimer's disease.	Sci Data	2023
37090548	Genetic regulation of cell-type specific chromatin accessibility shapes the etiology of brain diseases.	bioRxiv	2023
37464041	Depression pathophysiology, risk prediction of recurrence and comorbid psychiatric disorders using genome-wide analyses.	Nat Med	2023
37205394	ZBTB7A regulates MDD-specific chromatin signatures and astrocyte-mediated stress vulnerability in orbitofrontal cortex.		2023
37205331	Efficient differential expression analysis of large-scale single cell transcriptomics data using dreamlet.	Res Sq	2023
36811307	Genome-wide methylomic regulation of multiscale gene networks in Alzheimer's disease.	Alzheimers Dement	2023
36993704	Efficient differential expression analysis of large-scale single cell transcriptomics data using dreamlet.	bioRxiv	2023
35058635	Multi-ancestry eQTL meta-analysis of human brain identifies candidate causal variants for brain-related traits.	Nat Genet	2022
35393594	Common variants contribute to intrinsic human brain functional networks.	Nat Genet	2022
36171428	The three-dimensional landscape of cortical chromatin accessibility in Alzheimer's disease.	Nat Neurosci	2022
35701597	Impact of schizophrenia GWAS loci converge onto distinct pathways in cortical interneurons vs glutamatergic neurons during development.	Mol Psychiatry	2022
36163277	Identification of shared and differentiating genetic architecture for autism spectrum disorder, attention-deficit hyperactivity disorder and case subgroups.	Nat Genet	2022
36289231	Rescue of deficits by Brwd1 copy number restoration in the Ts65Dn mouse model of Down syndrome.	Nature Communications	2022
35931864	Genetics of the human microglia regulome refines Alzheimer's disease risk loci.	Nat Genet	2022
34154796	Sex Differences in the Human Brain Transcriptome of Cases With Schizophrenia.	Biol Psychiatry	2022
35332326	Chromatin domain alterations linked to 3D genome organization in a large cohort of schizophrenia and bipolar disorder brains.	Nat Neurosci	2022
34609283	Unbiased identification of novel transcription factors in striatal compartmentation and striosome maturation.	Elife	2021
34140357	Common genetic variation influencing human white matter microstructure.	Science	2021
33712570	Integration of Alzheimer's disease genetics and myeloid genomics identifies disease risk regulatory elements and genes.	Nat Commun	2021
33149216	Common schizophrenia risk variants are enriched in open chromatin regions of human glutamatergic neurons.	Nat Commun	2020
32075678	A chromosomal connectome for psychiatric and metabolic risk variants in adult dopaminergic neurons.	Genome Med	2020
32003784	decorate: differential epigenetic correlation test.	Bioinformatics	2020
31544924	Functional interpretation of genetic variants using deep learning predicts impact on chromatin accessibility and histone modification.	Nucleic Acids Res	2019
31551426	CommonMind Consortium provides transcriptomic and epigenomic data for Schizophrenia and Bipolar Disorder.	Sci Data	2019
29945882	An atlas of chromatin accessibility in the adult human brain.	Genome Res	2018
30204156	The Mount Sinai cohort of large-scale genomic, transcriptomic and proteomic data in Alzheimer's disease.	Sci Data	2018
28475759	NewProt - a protein engineering portal.	Protein Engineering, Design and Selection	2017
28449074	FireProt: web server for automated design of thermostable proteins.	Nucleic Acids Research	2017
27174934	HotSpot Wizard 2.0: automated design of site-specific mutations and smart libraries in protein engineering.	Nucleic Acids Research	2016
27224906	PredictSNP2: A Unified Platform for Accurately Evaluating SNP Effects by Exploiting the Different Characteristics of Variants in Distinct Genomic Regions.	PLoS Computational Biology	2016
26529612	FireProt: Energy- and Evolution-Based Computational Design of Thermostable Multiple-Point Mutants.	PLoS Comput Biol	2015
25055786	Computational tools for designing smart libraries.	Methods in Molecular Biology	2014
24453961	PredictSNP: robust and accurate consensus classifier for prediction of disease-related mutations.	PLoS Comput Biol	2014
24313542	Computer-assisted engineering of the synthetic pathway for biodegradation of a toxic persistent pollutant.	ACS Synthetic Biology	2014
25099170	Maximizing the efficiency of multienzyme process by stoichiometry optimization.	ChemBioChem	2014
10568069	[Cesarean section and perinatal mortality 1993-1996 in a regional perinatology center].	Ceska Gynekologie	1999
18967526	Preconcentration of platinum group metals on modified silicagel and their determination by inductively coupled plasma atomic emission spectrometry and inductively coupled plasma mass spectrometry in airborne particulates.	Talanta	1999
10510546	[Hemostasis and levels of cytoadhesion molecules in gestational diabetes].	Ceska Gynekologie	1999
9750404	[Detection of cadmium and zinc in the blood and follicular fluid in women in the IVF and ET program].	Ceska Gynekologie	1998
8625379	[Changes in hemostasis and fibrinolysis in gestational diabetes].	Casopis Lekaru Ceskych	1996
8616880	[Maternal hyperphenylalaninemia in a population of healty Czech women. 18 years' experience with mass screening, diet therapy and metabolic monitoring].	Casopis Lekaru Ceskych	1996