Author details

Full Name

Jui-Hung Hung

Affiliation

ORCID

Career Start Year

2006

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37527302	Full-Privacy Secured Search Engine Empowered by Efficient Genome-Mapping Algorithms.		2023
37064776	MiR34 contributes to spinal muscular atrophy and AAV9-mediated delivery of MiR34a ameliorates the motor deficits in SMA mice.		2023
35085024	Associations of Chinese Herbal Medicine Use with the Risks of Acute Exacerbation and Mortality in Patients with Chronic Obstructive Pulmonary Disease: A Nationwide Retrospective Cohort Study.		2022
35688486	Estimating intraclonal heterogeneity and subpopulation changes from bulk expression profiles in CMap.	Life Science Alliance	2022
33459339	EARRINGS: an efficient and accurate adapter trimmer entails no a priori adapter sequences.		2021
32164275	Epigenetic Regulation of <i>WNT3A</i> Enhancer during Regeneration of Injured Cortical Neurons.	Int J Mol Sci	2020
32020893	Correction: locus-derived LncRNAs perpetuate postmitotic motor neuron cell fate and subtype identity.	eLife	2020
31467771	Two-photon STED nanoscopy realizing 100-nm spatial resolution utilizing high-peak-power sub-nanosecond 655-nm pulses.	Biomedical Optics Express	2019
31555818	Ash2l interacts with Oct4-stemness circuitry to promote super-enhancer-driven pluripotency network.	Nucleic Acids Research	2019
30258682	Advanced easySTED microscopy based on two-photon excitation by electrical modulations of light pulse wavefronts.	Biomedical Optics Express	2018
30311912	locus-derived lncRNAs perpetuate postmitotic motor neuron cell fate and subtype identity.	eLife	2018
27574193	Identifying Regions Enriched in a ChIP-seq Data Set (Peak Finding).	Cold Spring Harb Protoc	2017
29293419	A 135-mW Fully Integrated Data Processor for Next-Generation Sequencing.		2017
27574204	Mapping Short Sequence Reads to a Reference Genome.	Cold Spring Harb Protoc	2017
27574203	Mapping Billions of Short Reads to a Reference Genome.	Cold Spring Harb Protoc	2017
27574201	Analyzing Microarray Data.	Cold Spring Harb Protoc	2017
27574199	Discovering cis-Regulatory Motifs.	Cold Spring Harb Protoc	2017
27574196	Peak-Finding Algorithms.	Cold Spring Harb Protoc	2017
27574195	Motif Finding.	Cold Spring Harb Protoc	2017
27574194	Analysis of Microarray and RNA-seq Expression Profiling Data.	Cold Spring Harb Protoc	2017
27607964	1â¿¿â¿¿MW peak-power subpicosecond optical pulse source based on a gain-switched laser diode.	Optics Letters	2016
27412087	sBWT: memory efficient implementation of the hardware-acceleration-friendly Schindler transform for the fast biological sequence mapping.		2016
27480726	Data Formats in Bioinformatics.	Cold Spring Harb Protoc	2016
27574202	Designing Polymerase Chain Reaction Primers Using Primer3Plus.	Cold Spring Harb Protoc	2016
27574200	Sequence Alignment and Homology Search.	Cold Spring Harb Protoc	2016
27574198	Visualizing Genomic Annotations with the UCSC Genome Browser.	Cold Spring Harb Protoc	2016
27574197	Sequence Alignment and Homology Search with BLAST and ClustalW.	Cold Spring Harb Protoc	2016
27761142	Pulmonary Hilar Tumor: An Unusual Presentation of Sclerosing Hemangioma.	Case Reports in Medicine	2016
26145176	Uridylation of RNA Hairpins by Tailor Confines the Emergence of MicroRNAs in Drosophila.	Molecular Cell	2015
25707528	PEAT: an intelligent and efficient paired-end sequencing adapter trimming algorithm.	BMC Bioinformatics	2015
26007652	Tailor: a computational framework for detecting non-templated tailing of small silencing RNAs.	Nucleic Acids Res	2015
26004179	Mir-17â¿¼92 Governs Motor Neuron Subtype Survival by Mediating Nuclear PTEN.	Cell Reports	2015
24998598	High-resolution mapping of chromatin packaging in mouse embryonic stem cells and sperm.	Dev Cell	2014
25102063	A system for genome-wide histone variant dynamics in ES cells reveals dynamic MacroH2A2 replacement at promoters.	PLoS Genet	2014
25090087	Impacts of size and shape of silver nanoparticles on Arabidopsis plant growth and gene expression.	Plant Physiology and Biochemistry	2014
23203885	Factorbook.org: a Wiki-based database for transcription factor-binding data generated by the ENCODE consortium.	Nucleic Acids Res	2013
24302573	Hdac6 regulates Tip60-p400 function in stem cells.	Elife	2013
23192548	Gene Set/Pathway enrichment analysis.	Methods in Molecular Biology	2013
23368412	A computational approach for identifying microRNA-target interactions using high-throughput CLIP and PAR-CLIP sequencing.	BMC Genomics	2013
21900207	Gene set enrichment analysis: performance evaluation and usage guidelines.	Brief Bioinform	2012
30360291	Dicer Partner Proteins Tune the Length of Mature miRNAs in Flies and Mammals.	Cell	2012
22346740	Using functional signatures to identify repositioned drugs for breast, myelogenous leukemia and prostate cancer.	PLoS Computational Biology	2012
22388288	Long-term, efficient inhibition of microRNA function in mice using rAAV vectors.	Nat Methods	2012
23063653	Dicer partner proteins tune the length of mature miRNAs in flies and mammals.	Cell	2012
22055293	The 3'-to-5' exoribonuclease Nibbler shapes the 3' ends of microRNAs bound to Drosophila Argonaute1.	Curr Biol	2011
21106652	Target RNA-directed tailing and trimming purifies the sorting of endo-siRNAs between the two Drosophila Argonaute proteins.	RNA	2011
21179009	MicroRNA-regulated, systemically delivered rAAV9: a step closer to CNS-restricted transgene expression.	Mol Ther	2011
21177969	Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence.	Genome Res	2011
22196727	Mbd3/NURD complex regulates expression of 5-hydroxymethylcytosine marked genes in embryonic stem cells.	Cell	2011
21827660	Combinations of newly confirmed Glioma-Associated loci link regions on chromosomes 1 and 9 to increased disease risk.	BMC Medical Genomics	2011