Author details

Full Name

Daniela Delneri

Affiliation

ORCID

Career Start Year

1992

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37398159	Functional analysis of the kinome reveals a DYRK kinase involved in septal plugging is a novel antifungal drug target.		2023
37679437	High quality de novo genome assembly of the non-conventional yeast Kazachstania bulderi describes a potential low pH production host for biorefineries.		2023
36712349	Eisosome disruption by noncoding RNA deletion increases protein secretion in yeast.	PNAS Nexus	2022
36104328	Telomere-to-telomere genome sequence of the model mould pathogen Aspergillus fumigatus.	Nature Communications	2022
35389986	Aneuploidy influences the gene expression profiles in Saccharomyces pastorianus group I and II strains during fermentation.	PLoS Genet	2022
35955668	Quantitative Characterisation of Low Abundant Yeast Mitochondrial Proteins Reveals Compensation for Haplo-Insufficiency in Different Environments.	International Journal of Molecular Sciences	2022
35870233	Mitonuclear interplay in yeast: from speciation to phenotypic adaptation.	Current Opinion in Genetics and Development	2022
36377958	Volatile Aroma Compound Production Is Affected by Growth Rate in S. cerevisiae.	Applied and Environmental Microbiology	2022
34416971	Biotechnological exploitation of Saccharomyces jurei and its hybrids in craft beer fermentation uncovers new aroma combinations.	Food Microbiology	2021
36968259	A high-throughput screening method forÂ the discovery of and non- yeasts with potential in the brewing industry.		2021
33493158	Functional and transcriptional profiling of non-coding RNAs in yeast reveal context-dependent phenotypes and in trans effects on the protein regulatory network.	PLoS Genet	2021
34518218	Restoring fertility in yeast hybrids: Breeding and quantitative genetics of beneficial traits.	Proceedings of the National Academy of Sciences of the United States of America	2021
34550394	Transcriptional Profile of the Industrial Hybrid Saccharomyces pastorianus Reveals Temperature-Dependent Allele Expression Bias and Preferential Orthologous Protein Assemblies.	Molecular Biology and Evolution	2021
33050146	HybridMine: A Pipeline for Allele Inheritance and Gene Copy Number Prediction in Hybrid Genomes and Its Application to Industrial Yeasts.	Microorganisms	2020
32196094	An update on the diversity, ecology and biogeography of the Saccharomyces genus.	FEMS Yeast Research	2020
32244414	Plasticity of Mitochondrial DNA Inheritance and its Impact on Nuclear Gene Transcription in Yeast Hybrids.	Microorganisms	2020
33193572	Genomic Adaptation of Species to Industrial Environments.	Frontiers in Genetics	2020
31518062	Fast and Reliable PCR Amplification from Aspergillus fumigatus Spore Suspension Without Traditional DNA Extraction.	Current Protocols in Microbiology	2019
30507071	Targeted metagenomics approach to capture the biodiversity of Saccharomyces genus in wild environments.	Environmental Microbiology Reports	2019
31518064	High-Throughput Gene Replacement in Aspergillus fumigatus.	Current Protocols in Microbiology	2019
29345746	History of genome editing in yeast.	Yeast	2018
30097472	Whole Genome Sequencing, Assembly and Phenotypic Profiling for the New Budding Yeast Species .	G3: Genes, Genomes, Genetics	2018
29529031	Large-scale profiling of noncoding RNA function in yeast.	PLoS Genet	2018
28835561	Rapid functional and evolutionary changes follow gene duplication in yeast.		2017
28468764	A resource for functional profiling of noncoding RNA in the yeast <i>Saccharomyces cerevisiae</i>.	RNA	2017
28639933	Saccharomyces jurei sp. nov., isolation and genetic identification of a novel yeast species from Quercus robur.	International Journal of Systematic and Evolutionary Microbiology	2017
27528754	Non-coding RNAs and disease: the classical ncRNAs make a comeback.	Biochem Soc Trans	2016
27194751	Novel Intronic RNA Structures Contribute to Maintenance of Phenotype in Saccharomyces cerevisiae.	Genetics	2016
26929245	Widespread Impact of Chromosomal Inversions on Gene Expression Uncovers Robustness via Phenotypic Buffering.	Molecular Biology and Evolution	2016
24643015	Sequencing and characterisation of rearrangements in three S. pastorianus strains reveals the presence of chimeric genes and gives evidence of breakpoint reuse.	PLoS ONE	2014
25364803	Intron evolution in Saccharomycetaceae.	Genome Biology and Evolution	2014
24120669	Osteoblastic cell secretome: a novel role for progranulin during risedronate treatment.		2014
25243355	Environmental systems biology of cold-tolerant phenotype in Saccharomyces species adapted to grow at different temperatures.	Molecular Ecology	2014
24048642	Characterization and prediction of haploinsufficiency using systems-level gene properties in yeast.	G3: Genes, Genomes, Genetics	2013
24137105	Chimeric protein complexes in hybrid species generate novel phenotypes.	PLoS Genetics	2013
23009617	The yeast factory.		2012
22356628	Genome-wide analysis of longevity in nutrient-deprived Saccharomyces cerevisiae reveals importance of recycling in maintaining cell viability.	Environ Microbiol	2012
22916115	Impact of chromosomal inversions on the yeast DAL cluster.	PLoS ONE	2012
22817757	Non-coding RNAs in Saccharomyces cerevisiae: what is the function?	Biochem Soc Trans	2012
21863493	Competition experiments coupled with high-throughput analyses for functional genomics studies in yeast.	Methods in Molecular Biology	2011
21965291	Genome-wide analysis of yeast stress survival and tolerance acquisition to analyze the central trade-off between growth rate and cellular robustness.	Mol Biol Cell	2011
21865600	Knock-in reconstitution studies reveal an unexpected role of Cys-65 in regulating APE1/Ref-1 subcellular trafficking and function.	Molecular Biology of the Cell	2011
20444979	Fusel alcohols regulate translation initiation by inhibiting eIF2B to reduce ternary complex in a mechanism that may involve altering the integrity and dynamics of the eIF2B body.	Molecular Biology of the Cell	2010
20808905	Evolutionary systems biology of amino acid biosynthetic cost in yeast.	PLoS One	2010
20846145	Barcode technology in yeast: application to pharmacogenomics.	FEMS Yeast Research	2010
20660110	Gene duplication and environmental adaptation within yeast populations.	Genome Biology and Evolution	2010
20641014	New generation of loxP-mutated deletion cassettes for the genetic manipulation of yeast natural isolates.	Yeast	2010
19226166	Transcriptome and proteome analysis of osteocytes treated with nitrogen-containing bisphosphonates.	Journal of Proteome Research	2009
19744312	Identification of secondary targets of N-containing bisphosphonates in mammalian cells via parallel competition analysis of the barcoded yeast deletion collection.		2009
19180539	Genome-wide analysis and proteomic studies reveal APE1/Ref-1 multifunctional role in mammalian cells.	Proteomics	2009