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Author Details

Kais Ghedira
Pasteur Institute of Tunis, University of Tunis El Manar
2008
56
12
PMIDPaper TitleJournal TitlePublished Year
37854792PHINDaccess Hackathons for COVID-19 and Host-Pathogen Interaction: Lessons Learned and Recommendations for Low- and Middle-Income Countries.Biomed Res Int2023
34340908Distribution of virulence and antibiotic resistance genes in Campylobacter jejuni and Campylobacter coli isolated from broiler chickens in Tunisia.J Microbiol Immunol Infect2022
35632749SARS-CoV-2 Lineage A.27: New Data from African Countries and Dynamics in the Context of the COVID-19 Pandemic.Viruses2022
36615520The First Snake Venom KTS/Disintegrins-Integrin Interactions Using Bioinformatics Approaches.Molecules2022
36429146Relationships between Virulence Genes and Antibiotic Resistance Phenotypes/Genotypes in <i>Campylobacter</i> spp. Isolated from Layer Hens and Eggs in the North of Tunisia: Statistical and Computational Insights.Foods2022
35909609Antimicrobial resistance genes, virulence markers and prophage sequences in <i>Salmonella enterica serovar</i> Enteritidis isolated in Tunisia using whole genome sequencing.Curr Res Microb Sci2022
36241024Overview of the epidemic history of Hepatitis C uncommon subtypes 2i and 4d in Tunisia and in the world.Infect Genet Evol2022
36126884Phylogenetic analysis and assessment of the pathogenic potential of the first H9N2 avian influenza viruses isolated from wild birds and Lagoon water in Tunisia.Virus Res2022
36126092Microbiological and molecular screening of <i>Candida</i> spp. isolated from genital tract of asymptomatic pregnant women.J Med Microbiol2022
35884085Virulence Profiling, Multidrug Resistance and Molecular Mechanisms of <i>Campylobacter</i> Strains from Chicken Carcasses in Tunisia.Antibiotics (Basel)2022
35163319Application and Challenge of 3rd Generation Sequencing for Clinical Bacterial Studies.Int J Mol Sci2022
35124463DisintegrinDB: The first integrated database resource of disintegrins from snake venoms.Biochem Biophys Res Commun2022
35207753African Genomic Medicine Portal: A Web Portal for Biomedical Applications.J Pers Med2022
35237662SARS-CoV-2 Spike Protein Unlikely to Bind to Integrins <i>via</i> the Arg-Gly-Asp (RGD) Motif of the Receptor Binding Domain: Evidence From Structural Analysis and Microscale Accelerated Molecular Dynamics.Front Mol Biosci2022
35056040Fatty Acid Profiles of <i>Leishmania major</i> Derived from Human and Rodent Hosts in Endemic Cutaneous Leishmaniasis Areas of Tunisia and Algeria.Pathogens2022
35197792Roots of the xerophyte <i>Panicum turgidum</i> host a cohort of ionizing-radiation-resistant biotechnologically-valuable bacteria.Saudi J Biol Sci2022
35337031Molecular Epidemiology of SARS-CoV-2 in Tunisia (North Africa) through Several Successive Waves of COVID-19.Viruses2022
34252258Identification and characterization of multidrug-resistant ESBL-producing Salmonella enterica serovars Kentucky and Typhimurium isolated in Tunisia CTX-M-61/TEM-34, a novel cefotaxime-hydrolysing β-lactamase of Salmonella.J Appl Microbiol2022
32780929Quinolone resistance among Salmonella Kentucky and Typhimurium isolates in Tunisia: first report of Salmonella Typhimurium ST34 in Africa and qnrB19 in Tunisia.J Appl Microbiol2021
33771096In silico comparative study of SARS-CoV-2 proteins and antigenic proteins in BCG, OPV, MMR and other vaccines: evidence of a possible putative protective effect.BMC Bioinformatics2021
33794662Human OMICs and Computational Biology Research in Africa: Current Challenges and Prospects.OMICS2021
33705445Identification of two novel hepatitis C virus subtype 2 from Tunisia (2v and 2w).PLoS One2021
33864455H3ABioNet genomic medicine and microbiome data portals hackathon proceedings.Database (Oxford)2021
33503040Germline copy number variations in BRCA1/2 negative families: Role in the molecular etiology of hereditary breast cancer in Tunisia.PLoS One2021
34756072Sequencing Using a Two-Step Strategy Reveals High Genetic Diversity in the S Gene of SARS-CoV-2 after a High-Transmission Period in Tunis, Tunisia.Microbiol Spectr2021
34807924Phylogeography and phylogeny of Rhinoviruses collected from Severe Acute Respiratory Infection (SARI) cases over successive epidemic periods in Tunisia.PLoS One2021
34261445Whole genome sequencing and phylogenetic analysis of six SARS-CoV-2 strains isolated during COVID-19 pandemic in Tunisia, North Africa.BMC Genomics2021
33946812Fecal Metabolomics Reveals Distinct Profiles of Kidney Transplant Recipients and Healthy Controls.Diagnostics (Basel)2021
33030625Comparison of conventional molecular and whole-genome sequencing methods for subtyping Salmonella enterica serovar Enteritidis strains from Tunisia.Eur J Clin Microbiol Infect Dis2021
33279651Ionizing-radiation-resistant Kocuria rhizophila PT10 isolated from the Tunisian Sahara xerophyte Panicum turgidum: Polyphasic characterization and proteogenomic arsenal.Genomics2021
33104875Draft genome sequence of Promicromonospora panici sp. nov., a novel ionizing-radiation-resistant actinobacterium isolated from roots of the desert plant Panicum turgidum.Extremophiles2021
31220587Metataxonomics of Tunisian phosphogypsum based on five bioinformatics pipelines: Insights for bioremediation.Genomics2020
31911611Identification of a CDH12 potential candidate genetic variant for an autosomal dominant form of transgrediens and progrediens palmoplantar keratoderma in a Tunisian family.J Hum Genet2020
33376724Pathway Maps of Orphan and Complex Diseases Using an Integrative Computational Approach.Biomed Res Int2020
33426052An Integrative Computational Approach for the Prediction of Human-<i>Plasmodium</i> Protein-Protein Interactions.Biomed Res Int2020
33096980High-quality genome sequence assembly of R.A73 Enterococcus faecium isolated from freshwater fish mucus.BMC Microbiol2020
32650097The morbid cutaneous anatomy of the human genome revealed by a bioinformatic approach.Genomics2020
32410735Interaction of the spike protein RBD from SARS-CoV-2 with ACE2: Similarity with SARS-CoV, hot-spot analysis and effect of the receptor polymorphism.Biochem Biophys Res Commun2020
32569743Genetic diversity of clinical Salmonella enterica serovar Typhimurium in a university hospital of south Tunisia, 2000-2013.Infect Genet Evol2020
32125935A review of clinical pharmacogenetics Studies in African populations.Per Med2020
30529640Genome analysis provides insights into crude oil degradation and biosurfactant production by extremely halotolerant Halomonas desertis G11 isolated from Chott El-Djerid salt-lake in Tunisian desert.Genomics2019
31260787Tracing the epidemic history of hepatitis C virus genotype 1b in Tunisia and in the world, using a Bayesian coalescent approach.Infect Genet Evol2019
31534954Epidemiology of <i>β</i>-Lactamase-Producing Staphylococci and Gram Negative Bacteria as Cause of Clinical Bovine Mastitis in Tunisia.Biomed Res Int2019
29335550The PEG-responding desiccome of the alder microsymbiont Frankia alni.Sci Rep2018
29879995Family specific genetic predisposition to breast cancer: results from Tunisian whole exome sequenced breast cancer cases.J Transl Med2018
29979707A common molecular signature of patients with sickle cell disease revealed by microarray meta-analysis and a genome-wide association study.PLoS One2018
30671471Prevalence and Antibiotic Resistance Patterns of <i>Campylobacter</i> spp. Isolated from Broiler Chickens in the North of Tunisia.Biomed Res Int2018
29778876Genome sequence analysis of a novel Bacillus thuringiensis strain BLB406 active against Aedes aegypti larvae, a novel potential bioinsecticide.Int J Biol Macromol2018
29382529Homology modeling and docking of AahII-Nanobody complexes reveal the epitope binding site on AahII scorpion toxin.Biochem Biophys Res Commun2018
29793520De novo assembly and annotation of Hyalomma dromedarii tick (Acari: Ixodidae) sialotranscriptome with regard to gender differences in gene expression.Parasit Vectors2018
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Collaborators

University of Cape Town
Co-authored papers 8
Institute of Infectious Disease and Molecular Medicine, University of Cape Town
Co-authored papers 7
University of Cape Town
Co-authored papers 4
Muhimbili University of Health and Allied Sciences
Co-authored papers 2
University of Cape Town
Co-authored papers 2
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Departments of Hematology at Children's National Hospital
Co-authored papers 1
Duke University
Co-authored papers 1
University of Mauritius
Co-authored papers 1
University of Abuja (CESRTA) Federal Capital Territory (FCT)
Co-authored papers 1
University of North Carolina at Chapel Hill
Co-authored papers 1
University of Cape Town
Co-authored papers 1
Baylor College of Medicine
Co-authored papers 1
Kuwait University.
Co-authored papers 1
University Teaching Hospitals-Children's Hospital
Co-authored papers 1
and Translation Research Center
Co-authored papers 1
University of Cape Town
Co-authored papers 1
Co-authored papers 1
Institute of Endemic Diseases, University of Khartoum
Co-authored papers 1
and Translation Research Center
Co-authored papers 1
Universite Officielle de Mbujimayi
Co-authored papers 1
Makerere University College of Health Sciences
Co-authored papers 1
Co-authored papers 1
London North West University Healthcare NHS Trust, Imperial College London
Co-authored papers 1
Evelina Children's Hospital, Guy's and St. Thomas NHS Foundation Trust
Co-authored papers 1
University of Cape Town
Co-authored papers 1
Unidade de Onco-Hematologia, Instituto da Crianca
Co-authored papers 1
Loyola University Medical Center.
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Sickle Cell Foundation of Ghana
Co-authored papers 1
University of Cape Town
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