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Author Details

John A C Archer
King Abdullah University of Science and Technology (KAUST)
1985
46
22
PMIDPaper TitleJournal TitlePublished Year
29188989Identification and Experimental Characterization of an Extremophilic Brine Pool Alcohol Dehydrogenase from Single Amplified Genomes.ACS Chem Biol2018
28056772In silico screening for candidate chassis strains of free fatty acid-producing cyanobacteria.BMC Genomics2017
28528426Building a bio-based industry in the Middle East through harnessing the potential of the Red Sea biodiversity.Appl Microbiol Biotechnol2017
27626430Bioprospecting Red Sea Coastal Ecosystems for Culturable Microorganisms and Their Antimicrobial Potential.Mar Drugs2016
26546514DESM: portal for microbial knowledge exploration systems.Nucleic Acids Res2016
26475934Rhizosphere microbiome metagenomics of gray mangroves (Avicennia marina) in the Red Sea.Gene2016
27642121Metagenomics as a preliminary screen for antimicrobial bioprospecting.Gene2016
25758402Hi-Jack: a novel computational framework for pathway-based inference of host-pathogen interactions.Bioinformatics2015
26549842Soil and Rhizosphere Associated Fungi in Gray Mangroves (Avicennia marina) from the Red Sea--A Metagenomic Approach.Genomics Proteomics Bioinformatics2015
24280218A novel mercuric reductase from the unique deep brine environment of Atlantis II in the Red Sea.J Biol Chem2014
25356733Chemical compounds toxic to invertebrates isolated from marine cyanobacteria of potential relevance to the agricultural industry.Toxins (Basel)2014
24921648Core microbial functional activities in ocean environments revealed by global metagenomic profiling analyses.PLoS One2014
24670764A promoter-level mammalian expression atlas.Nature2014
23110968Dragon TIS Spotter: an Arabidopsis-derived predictor of translation initiation sites in plants.Bioinformatics2013
24126940Exploration of miRNA families for hypotheses generation.Sci Rep2013
23874789Simplified method for predicting a functional class of proteins in transcription factor complexes.PLoS One2013
23616439Dragon PolyA Spotter: predictor of poly(A) motifs within human genomic DNA sequences.Bioinformatics2013
21723422Overview of errors in the reference sequence and annotation of Mycobacterium tuberculosis H37Rv, and variation amongst its isolates.Infect Genet Evol2012
23006760Importance of the genetic diversity within the Mycobacterium tuberculosis complex for the development of novel antibiotics and diagnostic tests of drug resistance.Antimicrob Agents Chemother2012
22822370Conotoxins that confer therapeutic possibilities.Mar Drugs2012
22670148Mutations and binding sites of human transcription factors.Front Genet2012
22088842Dragon PolyA Spotter: predictor of poly(A) motifs within human genomic DNA sequences.Bioinformatics2012
22110032DAMPD: a manually curated antimicrobial peptide database.Nucleic Acids Res2012
21177677Comment on: isoniazid and rifampicin resistance-associated mutations in Mycobacterium tuberculosis isolates from Yangon, Myanmar: implications for rapid molecular testing.J Antimicrob Chemother2011
22131960Recently confirmed apoptosis-inducing lead compounds isolated from marine sponge of potential relevance in cancer treatment.Mar Drugs2011
21829555Toward an understanding of the molecular mechanisms of barnacle larval settlement: a comparative transcriptomic approach.PLoS One2011
21930879Impact of Fgd1 and ddn diversity in Mycobacterium tuberculosis complex on in vitro susceptibility to PA-824.Antimicrob Agents Chemother2011
21709103Polymorphisms in isoniazid and prothionamide resistance genes of the Mycobacterium tuberculosis complex.Antimicrob Agents Chemother2011
21422234Thr270Ile in embC (Rv3793) is not a marker for ethambutol resistance in the Mycobacterium tuberculosis complex.Antimicrob Agents Chemother2011
20369357Transcriptional response of Rhodococcus aetherivorans I24 to polychlorinated biphenyl-contaminated sediments.Microb Ecol2010
20805400Thr202Ala in thyA is a marker for the Latin American Mediterranean lineage of the Mycobacterium tuberculosis complex rather than para-aminosalicylic acid resistance.Antimicrob Agents Chemother2010
20852189Role of mutations in dihydrofolate reductase DfrA (Rv2763c) and thymidylate synthase ThyA (Rv2764c) in Mycobacterium tuberculosis drug resistance.Antimicrob Agents Chemother2010
20947864Role of the dihydrofolate reductase DfrA (Rv2763c) in trimethoprim-sulfamethoxazole (co-trimoxazole) resistance in Mycobacterium tuberculosis.Antimicrob Agents Chemother2010
20634954Read length and repeat resolution: exploring prokaryote genomes using next-generation sequencing technologies.PLoS One2010
19020060Single-nucleotide polymorphisms in Rv2629 are specific for Mycobacterium tuberculosis genotypes Beijing and Ghana but not associated with rifampin resistance.J Clin Microbiol2009
19823582Genomic diversity among drug sensitive and multidrug resistant isolates of Mycobacterium tuberculosis with identical DNA fingerprints.PLoS One2009
16421716Potential of Rhodococcus strains for biotechnological vanillin production from ferulic acid and eugenol.Appl Microbiol Biotechnol2006
11535792Construction of Rhodococcus random mutagenesis libraries using Tn5 transposition complexes.Microbiology (Reading)2001
10068799Molecular characterisation of a Rhodococcus ohp operon.Antonie Van Leeuwenhoek1998
8409918The DNA sequence and minimal replicon of the Corynebacterium glutamicum plasmid pSR1: evidence of a common ancestry with plasmids from C. diphtheriae.J Gen Microbiol1993
1743520A C-terminal deletion in Corynebacterium glutamicum homoserine dehydrogenase abolishes allosteric inhibition by L-threonine.Gene1991
2127631The molecular structure of the Corynebacterium glutamicum threonine synthase gene.Mol Microbiol1990
2082143Nucleotide sequence and organization of the upstream region of the Corynebacterium glutamicum lysA gene.Mol Microbiol1990
2671664Characterization of the ColE1 mobilization region and its protein products.Mol Gen Genet1989
2835591Nucleotide sequence and fine structural analysis of the Corynebacterium glutamicum hom-thrB operon.Mol Microbiol1988
3003536Multimer resolution systems of ColE1 and ColK: localisation of the crossover site.Mol Gen Genet1985
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Collaborators

Vladimir B Bajic
King Abdullah University of Science and Technology (KAUST)
Co-authored papers 21
Boris R Jankovic
4700 King Abdullah University of Science and Technology
Co-authored papers 8
Intikhab Alam
College of Life Sciences
Co-authored papers 5
Takashi Gojobori
Co-authored papers 3
Xin Gao
King Abdullah University of Science and Technology (KAUST)
Co-authored papers 2
Aleksandar Radovanovic
Computational Bioscience Research Center (CBRC)
Co-authored papers 2
Stefan T Arold
Co-authored papers 2
Beno??t Marchand
Universite de Sherbrooke
Co-authored papers 2
Ulf Schaefer
Co-authored papers 2
Yulia A Medvedeva
Research Center of Biotechnology RAS, Russian Academy of Sciences
Co-authored papers 2
Robert Hoehndorf
King Abdullah University of Science and Technology
Co-authored papers 2
Jo??o C Setubal
Chemistry Institute, Universidade de Sao Paulo - USP
Co-authored papers 2
Robin Andersson
University of Copenhagen
Co-authored papers 1
Suzana Savvi
South African Medical Research Council (SAMRC), University of Cape Town
Co-authored papers 1
Ernst J Wolvetang
Australian Institute for Bioengineering and Nanotechnology, University of Queensland
Co-authored papers 1
Peter Heutink
German Center for Neurodegenerative Diseases (DZNE).
Co-authored papers 1
Emmanuel Dimont
Harvard School of Public Health
Co-authored papers 1
Reto Guler
International Centre for Genetic Engineering and Biotechnology
Co-authored papers 1
Stefano Gustincich
Istituto Italiano di Tecnologia
Co-authored papers 1
Haruhiko Koseki
RIKEN Research Center for Allergy and Immunology
Co-authored papers 1
Yosuke Mizuno
Yokohama National University
Co-authored papers 1
Guojun Sheng
International Research Center for Medical Sciences (IRCMS), Kumamoto University
Co-authored papers 1
Christophe Simon
RIKEN Yokohama Institute
Co-authored papers 1
Silvano Piazza
International Centre for Genetic Engineering and Biotechnology
Co-authored papers 1
Hiroo Toyodo
Co-authored papers 1
Emily J Wood
Center for Molecular Medicine and Genetics, Wayne State University
Co-authored papers 1
Martin S Taylor
Institute of Genetics and Cancer, University of Edinburgh
Co-authored papers 1
Hui Jia
Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences
Co-authored papers 1
Naoto Kondo
Nagoya City University Graduate School of Medical Sciences
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Shigeo Koyasu
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Release 1.2