Author details

Full Name

John J Rice

Affiliation

ORCID

Career Start Year

1992

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
31946116	Turning the Finger into a Writing Tool.	Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference	2019
29955666	Digital technologies as biomarkers, clinical outcomes assessment, and recruitment tools in Alzheimer's disease clinical trials.	Alzheimers Dement (N Y)	2018
30154725	Gaussian Process Regressions for Inverse Problems and Parameter Searches in Models of Ventricular Mechanics.	Frontiers in Physiology	2018
29145393	Estimating the probabilities of rare arrhythmic events in multiscale computational models of cardiac cells and tissue.	PLoS Comput Biol	2017
29184497	Novel Two-Step Classifier for Torsades de Pointes Risk Stratification from Direct Features.	Frontiers in Pharmacology	2017
27085901	Influence of metabolic dysfunction on cardiac mechanics in decompensated hypertrophy and heart failure.	J Mol Cell Cardiol	2016
25236459	Understanding the limits of animal models as predictors of human biology: lessons learned from the sbv IMPROVER Species Translation Challenge.	Bioinformatics	2015
25567753	A high-resolution computational model of the deforming human heart.	Biomechanics and Modeling in Mechanobiology	2015
25479336	Impaired IKs channel activation by Ca(2+)-dependent PKC shows correlation with emotion/arousal-triggered events in LQT1.	Journal of Molecular and Cellular Cardiology	2015
25294919	A crowd-sourcing approach for the construction of species-specific cell signaling networks.	Bioinformatics	2015
26807042	Verification of cardiac mechanics software: benchmark problems and solutions for testing active and passive material behaviour.	Proc Math Phys Eng Sci	2015
25977767	The species translation challenge-a systems biology perspective on human and rat bronchial epithelial cells.	Sci Data	2014
23734785	Towards real-time simulation of cardiac electrophysiology in a human heart at high resolution.	Computer Methods in Biomechanics and Biomedical Engineering	2013
23966112	Strengths and limitations of microarray-based phenotype prediction: lessons learned from the IMPROVER Diagnostic Signature Challenge.	Bioinformatics	2013
23153844	In silico cardiac risk assessment in patients with long QT syndrome: type 1: clinical predictability of cardiac models.	Journal of the American College of Cardiology	2012
22423044	Industrial methodology for process verification in research (IMPROVER): toward systems biology verification.	Bioinformatics	2012
21904331	Verification of systems biology research in the age of collaborative competition.	Nat Biotechnol	2011
20865780	Integrative modeling of the cardiac ventricular myocyte.	Wiley Interdiscip Rev Syst Biol Med	2011
21451124	Use of mutant-specific ion channel characteristics for risk stratification of long QT syndrome patients.	Science Translational Medicine	2011
21768044	Performance of hybrid programming models for multiscale cardiac simulations: preparing for petascale computation.	IEEE Trans Biomed Eng	2011
22254341	Petascale computation performance of lightweight multiscale cardiac models using hybrid programming models.	Annu Int Conf IEEE Eng Med Biol Soc	2011
21886622	Cardiac electromechanical models: from cell to organ.	Frontiers in Physiology	2011
21657987	Orthogonal recursive bisection as data decomposition strategy for massively parallel cardiac simulations.		2011
21988833	The self-assessment trap: can we all be better than average?	Mol Syst Biol	2011
20682251	Distribution of electromechanical delay in the heart: insights from a three-dimensional electromechanical model.	Biophysical Journal	2010
19964262	Strong scaling and speedup to 16,384 processors in cardiac electro-mechanical simulations.		2009
29783388	Computational modeling of cardiac disease: potential for personalized medicine.		2009
19104827	Glass microneedles for force measurements: a finite-element analysis model.	Pflugers Archiv European Journal of Physiology	2009
19964263	Orthogonal recursive bisection data decomposition for high performance computing in cardiac model simulations: dependence on anatomical geometry.		2009
18229700	Spatially-compressed cardiac myofilament models generate hysteresis that is not found in real muscle.		2008
19162721	Large scale cardiac modeling on the Blue Gene supercomputer.		2008
18234826	Approximate model of cooperative activation and crossbridge cycling in cardiac muscle using ordinary differential equations.	Biophysical Journal	2008
17363597	A single nucleotide polymorphism in the MDM2 gene disrupts the oscillation of p53 and MDM2 levels in cells.	Cancer Res	2007
16986275	p53-Mdm2 loop controlled by a balance of its feedback strength and effective dampening using ATM and delayed feedback.	Syst Biol (Stevenage)	2005
16099987	Formation of regulatory patterns during signal propagation in a Mammalian cellular network.	Science	2005
15486043	Reconstructing biological networks using conditional correlation analysis.	Bioinformatics	2005
15728355	Lasting impressions: motifs in protein-protein maps may provide footprints of evolutionary events.	Proc Natl Acad Sci U S A	2005
16186499	A plausible model for the digital response of p53 to DNA damage.	Proc Natl Acad Sci U S A	2005
15142743	Approaches to modeling crossbridges and calcium-dependent activation in cardiac muscle.	Progress in Biophysics and Molecular Biology	2004
14764572	Genes@Work: an efficient algorithm for pattern discovery and multivariate feature selection in gene expression data.	Bioinformatics	2004
12547772	Ising model of cardiac thin filament activation with nearest-neighbor cooperative interactions.	Biophys J	2003
10710361	Modeling short-term interval-force relations in cardiac muscle.	Am J Physiol Heart Circ Physiol	2000
10330260	Comparison of putative cooperative mechanisms in cardiac muscle: length dependence and dynamic responses.	Am J Physiol	1999
10082479	Mechanisms of altered excitation-contraction coupling in canine tachycardia-induced heart failure, II: model studies.	Circ Res	1999
10512809	Modeling gain and gradedness of Ca2+ release in the functional unit of the cardiac diadic space.	Biophys J	1999
10603976	Modeling short-term interval-force relations in cardiac muscle.	Ann N Y Acad Sci	1998
9533866	Model studies of the role of mechano-sensitive currents in the generation of cardiac arrhythmias.	J Theor Biol	1998
9785953	Modeling the cellular basis of altered excitation-contraction coupling in heart failure.	Prog Biophys Mol Biol	1998
9512016	Cardiac Ca2+ dynamics: the roles of ryanodine receptor adaptation and sarcoplasmic reticulum load.	Biophys J	1998
8642117	Effects of pinna position on head-related transfer functions in the cat.	Journal of the Acoustical Society of America	1996