Author details

Full Name

Vladimir Brusic

Affiliation

ORCID

Career Start Year

1994

Papers

166

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37258906	Protocol for Classification Single-Cell PBMC Types from Pathological Samples Using Supervised Machine Learning.		2023
36268024	Rare variants and HLA haplotypes associated in patients with neuromyelitis optica spectrum disorders.	Front Immunol	2022
35632118	Multi-AP and Test Point Accuracy of the Results in WiFi Indoor Localization.	Sensors	2022
35059370	Estimating the Effects of Public Health Measures by SEIR(MH) Model of COVID-19 Epidemic in Local Geographic Areas.	Frontiers in Public Health	2021
33849445	TANTIGEN 2.0: a knowledge base of tumor T cell antigens and epitopes.	BMC Bioinformatics	2021
31076587	New approach to investigate Common Variable Immunodeficiency patients using spectrochemical analysis of blood.	Scientific Reports	2019
28077402	Elemental metabolomics.	Briefings in Bioinformatics	2018
28853442	PO and ID BCG vaccination in humans induce distinct mucosal and systemic immune responses and CD4<sup>+</sup> T cell transcriptomal molecular signatures.	Mucosal Immunol	2018
28280852	TANTIGEN: a comprehensive database of tumor T cell antigens.	Cancer Immunology, Immunotherapy	2017
29031298	Game meat authentication through rare earth elements fingerprinting.	Analytica Chimica Acta	2017
29322922	Analysis of viral diversity for vaccine target discovery.	BMC Medical Genomics	2017
26679766	A computational method for identification of vaccine targets from protein regions of conserved human leukocyte antigen binding.	BMC Med Genomics	2015
26844232	Advances in Computational Immunology.	Journal of Immunology Research	2015
26504853	FluKB: A Knowledge-Based System for Influenza Vaccine Target Discovery and Analysis of the Immunological Properties of Influenza Viruses.	Journal of Immunology Research	2015
26372948	Comprehensive analysis of cancer-associated somatic mutations in class I HLA genes.	Nat Biotechnol	2015
26681161	A systematic analysis of a broadly neutralizing antibody AR3C epitopes on Hepatitis C virus E2 envelope glycoprotein and their cross-reactivity.	BMC Medical Genomics	2015
26680269	An adaptive genetic algorithm for selection of blood-based biomarkers for prediction of Alzheimer's disease progression.	BMC Bioinformatics	2015
25045677	Big data analytics in immunology: a knowledge-based approach.	BioMed Research International	2014
25505899	Human leukocyte antigen typing using a knowledge base coupled with a high-throughput oligonucleotide probe array analysis.	Front Immunol	2014
25610859	Computational and bioinformatics techniques for immunology.	BioMed Research International	2014
25521819	Tumor antigens as proteogenomic biomarkers in invasive ductal carcinomas.	BMC Medical Genomics	2014
25521637	Pathway analysis and transcriptomics improve protein identification by shotgun proteomics from samples comprising small number of cells--a benchmarking study.	BMC Genomics	2014
25344903	Bioinformatics for cancer immunotherapy target discovery.	Cancer Immunology, Immunotherapy	2014
24075869	Disruption of helix-capping residues 671 and 674 reveals a role in HIV-1 entry for a specialized hinge segment of the membrane proximal external region of gp41.	Journal of Molecular Biology	2014
24441472	Computational resources for high-dimensional immune analysis from the Human Immunology Project Consortium.	Nat Biotechnol	2014
24894089	HLA-binding properties of tumor neoepitopes in humans.	Cancer Immunol Res	2014
24570677	Large-scale analysis of B-cell epitopes on influenza virus hemagglutinin - implications for cross-reactivity of neutralizing antibodies.	Frontiers in Immunology	2014
24891321	Systematic identification of personal tumor-specific neoantigens in chronic lymphocytic leukemia.	Blood	2014
24705205	HPVdb: a data mining system for knowledge discovery in human papillomavirus with applications in T cell immunology and vaccinology.	Database : the journal of biological databases and curation	2014
25062617	Mathematical modeling for novel cancer drug discovery and development.	Expert Opinion on Drug Discovery	2014
24564403	Literature classification for semi-automated updating of biological knowledgebases.	BMC Genomics	2013
24001880	BlockLogo: visualization of peptide and sequence motif conservation.	Journal of Immunological Methods	2013
24032635	Identification of human leucocyte antigen (HLA)-A*0201-restricted cytotoxic T lymphocyte epitopes derived from HLA-DOÎ² as a novel target for multiple myeloma.	Br J Haematol	2013
23514034	Computational vaccinology and the ICoVax 2012 workshop.	BMC Bioinformatics	2013
22154892	Combining cellular automata and Lattice Boltzmann method to model multiscale avascular tumor growth coupled with nutrient diffusion and immune competition.	Journal of Immunological Methods	2012
22573867	West Nile virus T-cell ligand sequences shared with other flaviviruses: a multitude of variant sequences as potential altered peptide ligands.	Journal of Virology	2012
22912393	Mutated BCR-ABL generates immunogenic T-cell epitopes in CML patients.	Clin Cancer Res	2012
22866951	Ultra-high resolution HLA genotyping and allele discovery by highly multiplexed cDNA amplicon pyrosequencing.	BMC Genomics	2012
22267603	Novel myeloma-associated antigens revealed in the context of syngeneic hematopoietic stem cell transplantation.	Blood	2012
23346220	Immune system modeling and related pathologies.	Comput Math Methods Med	2012
23281929	InCoB2012 Conference: from biological data to knowledge to technological breakthroughs.	BMC Bioinformatics	2012
21782820	Dana-Farber repository for machine learning in immunology.	Journal of Immunological Methods	2011
25544857	FLAVIdB: A data mining system for knowledge discovery in flaviviruses with direct applications in immunology and vaccinology.	Immunome Research	2011
22373288	PB1-F2 Finder: scanning influenza sequences for PB1-F2 encoding RNA segments.	BMC Bioinformatics	2011
22566864	Direct identification of an HPV-16 tumor antigen from cervical cancer biopsy specimens.	Front Immunol	2011
22566858	Conservation analysis of dengue virus T-cell epitope-based vaccine candidates using Peptide block entropy.	Frontiers in Immunology	2011
21400024	Impaired tumor antigen processing by immunoproteasome-expressing CD40-activated B cells and dendritic cells.	Cancer Immunology, Immunotherapy	2011
21130094	MULTIPRED2: a computational system for large-scale identification of peptides predicted to bind to HLA supertypes and alleles.	J Immunol Methods	2011
21270169	Transcriptionally abundant major histocompatibility complex class I alleles are fundamental to nonhuman primate simian immunodeficiency virus-specific CD8+ T cell responses.	J Virol	2011
21370076	Database resources for proteomics-based analysis of cancer.	Methods Mol Biol	2011