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Author Details

Ann S Hammonds
Lawrence Berkeley National Laboratory
1982
29
16
PMIDPaper TitleJournal TitlePublished Year
36652461A modERN resource: identification of Drosophila transcription factor candidate target genes using RNAi.Genetics2023
34819611An integrated host-microbiome response to atrazine exposure mediates toxicity in Drosophila.Commun Biol2021
33122411Chromosomal Sequence of Lactobacillus brevis Oregon-R-modENCODE Strain BDGP6, a Lactic Acid Bacterium Isolated from the Gut of Drosophila melanogaster.Microbiol Resour Announc2020
30598455Exploiting regulatory heterogeneity to systematically identify enhancers with high accuracy.Proc Natl Acad Sci U S A2019
29284660The ModERN Resource: Genome-Wide Binding Profiles for Hundreds of <i>Drosophila</i> and <i>Caenorhabditis elegans</i> Transcription Factors.Genetics2018
29888763OpenHiCAMM: High-Content Screening Software for Complex Microscope Imaging Workflows.iScience2018
29192079Complete Genome Sequence of <i>Acetobacter pomorum</i> Oregon-R-modENCODE Strain BDGP5, an Acetic Acid Bacterium Found in the <i>Drosophila melanogaster</i> Gut.Genome Announc2017
28983001Complete Genome Sequence of <i>Bacillus kochii</i> Oregon-R-modENCODE Strain BDGP4, Isolated from <i>Drosophila melanogaster</i> Gut.Genome Announc2017
28982997Complete Genome Sequence of <i>Enterococcus durans</i> Oregon-R-modENCODE Strain BDGP3, a Lactic Acid Bacterium Found in the <i>Drosophila melanogaster</i> Gut.Genome Announc2017
29146844Complete Genome Sequence of <i>Acetobacter tropicalis</i> Oregon-R-modENCODE Strain BDGP1, an Acetic Acid Bacterium Found in the <i>Drosophila melanogaster</i> Gut.Genome Announc2017
29025953Complete Genome Sequence of <i>Lactobacillus plantarum</i> Oregon-R-modENCODE Strain BDGP2 Isolated from <i>Drosophila melanogaster</i> Gut.Genome Announc2017
27071099Stability-driven nonnegative matrix factorization to interpret spatial gene expression and build local gene networks.Proc Natl Acad Sci U S A2016
24475130Toll mediated infection response is altered by gravity and spaceflight in Drosophila.PLoS One2014
25164755Comparative analysis of the transcriptome across distant species.Nature2014
24670639Diversity and dynamics of the Drosophila transcriptome.Nature2014
24359758Spatial expression of transcription factors in Drosophila embryonic organ development.Genome Biol2013
23236164DNA regions bound at low occupancy by transcription factors do not drive patterned reporter gene expression in Drosophila.Proc Natl Acad Sci U S A2012
21179090The developmental transcriptome of Drosophila melanogaster.Nature2011
21569360Dynamic reprogramming of chromatin accessibility during Drosophila embryo development.Genome Biol2011
21370071Development of expression-ready constructs for generation of proteomic libraries.Methods Mol Biol2011
20087342Systematic image-driven analysis of the spatial Drosophila embryonic expression landscape.Mol Syst Biol2010
20808951Quantitative analysis of the Drosophila segmentation regulatory network using pattern generating potentials.PLoS Biol2010
19360017Determination of gene expression patterns using high-throughput RNA in situ hybridization to whole-mount Drosophila embryos.Nat Protoc2009
18621688Tools for neuroanatomy and neurogenetics in Drosophila.Proc Natl Acad Sci U S A2008
16322506Mutational analysis of Stubble-stubbloid gene structure and function in Drosophila leg and bristle morphogenesis.Genetics2006
7685111The Drosophila Stubble-stubbloid gene encodes an apparent transmembrane serine protease required for epithelial morphogenesis.Proc Natl Acad Sci U S A1993
2128624Characterization of IMP-E3, a gene active during imaginal disc morphogenesis in Drosophila melanogaster.Dev Genet1990
3007512Isolation of genes active during hormone-induced morphogenesis in Drosophila imaginal discs.J Biol Chem1986
6277920beta-Endorphin and deletion peptides. A correlation of opiate receptor affinity with helix potential.J Biol Chem1982
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Collaborators

Susan E Celniker
Lawrence Berkeley National Laboratory
Co-authored papers 23
Kenneth H Wan
Lawrence Berkeley National Laboratory
Co-authored papers 13
Soo Park
Lawrence Berkeley National Laboratory
Co-authored papers 10
Charles Yu
Co-authored papers 9
James B Brown
Co-authored papers 6
Peter J Bickel
Co-authored papers 5
Erwin Frise
Fabric Genomics Inc.
Co-authored papers 5
Joseph W Carlson
US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
Co-authored papers 4
Carrie A Davis
Stanford University
Co-authored papers 3
Brenton R Graveley
Co-authored papers 3
Roger A Hoskins
University of California berkeley
Co-authored papers 3
Thomas R Gingeras
Stanley Institute for Cognitive Genomics
Co-authored papers 3
Norbert Perrimon
Co-authored papers 3
Michael B Eisen
Howard Hughes Medical Institute, University of California Berkeley
Co-authored papers 2
LaDeana W Hillier
University of Washington
Co-authored papers 2
Jiayu Wen
Beijing University of Chinese Medicine
Co-authored papers 2
Anastasia Samsonova
Co-authored papers 2
Barret D Pfeiffer
Howard Hughes Medical Institute
Co-authored papers 2
Alexander Dobin
Co-authored papers 2
Steven E Brenner
University of California berkeley
Co-authored papers 2
John A Stamatoyannopoulos
Altius Institute for Biomedical Sciences
Co-authored papers 2
Koon-Kiu Yan
Co-authored papers 2
Eric C Lai
Co-authored papers 2
Mark Gerstein
Yale University
Co-authored papers 2
Theresa K Canfield
University of Washington
Co-authored papers 1
Robert E Thurman
University of Washington
Co-authored papers 1
Sima Misra
University of California berkeley
Co-authored papers 1
David Steffen
Co-authored papers 1
Michael J MacCoss
University of Washington
Co-authored papers 1
Piero Carninci
RIKEN Center for Integrative Medical Sciences
Co-authored papers 1
Release 1.2