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Author Details

Alexander Goesmann
2002
263
64
PMIDPaper TitleJournal TitlePublished Year
37484460The Gene Space database.2023
37318336Functional Degeneracy in Paracoccus denitrificans Pd1222 Is Coordinated via RamB, Which Links Expression of the Glyoxylate Cycle to Activity of the Ethylmalonyl-CoA Pathway.2023
36943053Draft Genome Sequence of sp. Strain PAP.21, Isolated from a Coast Sample of Papua, Indonesia.2023
36927116Draft Genome Sequences of sp. Strain PAP.12 and sp. Strain PAP.19, Isolated from Marine Samples from Papua, Indonesia.2023
34613360Prediction of antimicrobial resistance based on whole-genome sequencing and machine learning.2022
35653398Evolutionarily stable gene clusters shed light on the common grounds of pathogenicity in the Acinetobacter calcoaceticus-baumannii complex.PLoS Genetics2022
35497503What goes around comes around: Artificial circular RNAs bypass cellular antiviral responses.Molecular Therapy - Nucleic Acids2022
36421255Deep Transfer Learning Enables Robust Prediction of Antimicrobial Resistance for Novel Antibiotics.Antibiotics2022
35317240Multi-label classification for multi-drug resistance prediction of .Computational and Structural Biotechnology Journal2022
35164555CRP-Like Transcriptional Regulator MrpC Curbs c-di-GMP and 3',3'-cGAMP Nucleotide Levels during Development in Myxococcus xanthus.mBio2021
33480838sp. nov., isolated from refrigerated beef.International Journal of Systematic and Evolutionary Microbiology2021
34280231Countering reproducibility issues in mathematical models with software engineering techniques: A case study using a one-dimensional mathematical model of the atrioventricular node.PLoS ONE2021
33736596WASP: a versatile, web-accessible single cell RNA-Seq processing platform.BMC Genomics2021
34001240How animals distribute themselves in space: energy landscapes of Antarctic avian predators.Movement Ecology2021
33462312Phytoplankton consortia as a blueprint for mutually beneficial eukaryote-bacteria ecosystems based on the biocoenosis of Botryococcus consortia.Sci Rep2021
33941076Genomic analysis of novel Yarrowia-like yeast symbionts associated with the carrion-feeding burying beetle Nicrophorus vespilloides.BMC Genomics2021
33883280Incipient genome erosion and metabolic streamlining for antibiotic production in a defensive symbiont.Proceedings of the National Academy of Sciences of the United States of America2021
34097596sp. nov. isolated from refrigerated dry-aged beef.International Journal of Systematic and Evolutionary Microbiology2021
33988716EDGAR3.0: comparative genomics and phylogenomics on a scalable infrastructure.Nucleic Acids Research2021
34356940mRNA Inventory of Extracellular Vesicles from .Journal of Fungi2021
34469545Satellite-Like W-Elements: Repetitive, Transcribed, and Putative Mobile Genetic Factors with Potential Roles for Biology and Evolution of Schistosoma mansoni.Genome Biology and Evolution2021
34682252Genome Analyses of the Less Aggressive AG1-IB Isolates 1/2/21 and O8/2 Compared to the Reference AG1-IB Isolate 7/3/14.Journal of Fungi2021
34739369Bakta: rapid and standardized annotation of bacterial genomes via alignment-free sequence identification.Microbial genomics2021
34440287Next-Generation Sequencing Analysis of the <i>Tineola bisselliella</i> Larval Gut Transcriptome Reveals Candidate Enzymes for Keratin Digestion.Genes (Basel)2021
32832994Acinetobacter baumannii in manure and anaerobic digestates of German biogas plants.FEMS Microbiology Ecology2020
32134915ASA3P: An automatic and scalable pipeline for the assembly, annotation and higher-level analysis of closely related bacterial isolates.PLoS Computational Biology2020
31622235sp. nov., isolated from beef.International Journal of Systematic and Evolutionary Microbiology2020
31922466sp. nov., isolated from meat.International Journal of Systematic and Evolutionary Microbiology2020
32985719Multilineage murine stem cells generate complex organoids to model distal lung development and disease.EMBO J2020
33198623iCLIP analysis of RNA substrates of the archaeal exosome.BMC Genomics2020
32579097Platon: identification and characterization of bacterial plasmid contigs in short-read draft assemblies exploiting protein sequence-based replicon distribution scores.Microbial genomics2020
32847789High diversity of Vibrio spp. associated with different ecological niches in a marine aquaria system and description of Vibrio aquimaris sp. nov.Systematic and Applied Microbiology2020
32845831The status of the genus (Pot 1992) and the species (Pot 1992).International Journal of Systematic and Evolutionary Microbiology2020
32616594Cyclophilin inhibitors restrict Middle East respiratory syndrome coronavirus <i>via</i> interferon-λ <i>in vitro</i> and in mice.Eur Respir J2020
31320432Whole-Genome Sequences of Clinical Enterobacter bugandensis Isolates from Germany.Microbiology Resource Announcements2019
31583244Complete Genome Sequence of the Plant Growth-Promoting Bacterium Strain E19.International Journal of Genomics2019
33512313sp. nov., isolated from a marine Mediterranean sponge .International Journal of Systematic and Evolutionary Microbiology2019
29857118Genome sequence of the endophytic strain Enterobacter sp. J49, a potential biofertilizer for peanut and maize.Genomics2019
30651342ADAR1 Is Required for Dendritic Cell Subset Homeostasis and Alveolar Macrophage Function.Journal of Immunology2019
30875926Cellular Gene Expression during Hepatitis C Virus Replication as Revealed by Ribosome Profiling.International Journal of Molecular Sciences2019
31138741Codon Usage Heterogeneity in the Multipartite Prokaryote Genome: Selection-Based Coding Bias Associated with Gene Location, Expression Level, and Ancestry.mBio2019
31023790Complete Genome Sequence of the Corallopyronin A-Producing Myxobacterium Corallococcus coralloides B035.Microbiology Resource Announcements2019
30936019Fabry disease: Detection of Alu-mediated exon duplication by NGS.Molecular and Cellular Probes2019
29110358Temporal variation in brain transcriptome is associated with the expression of female mimicry as a sequential male alternative reproductive tactic in fish.Molecular Ecology2018
29982548Effect of UV irradiation on Sulfolobus acidocaldarius and involvement of the general transcription factor TFB3 in the early UV response.Nucleic Acids Research2018
29227220Taxonomic analyses of members of the Streptomyces cinnabarinus cluster, description of Streptomyces cinnabarigriseus sp. nov. and Streptomyces davaonensis sp. nov.International Journal of Systematic and Evolutionary Microbiology2018
29095140Streptomyces ciscaucasicus Sveshnikova et al. 1983 is a later subjective synonym of Streptomyces canus Heinemann et al. 1953.International Journal of Systematic and Evolutionary Microbiology2018
29704459A reference genome of the Chinese hamster based on a hybrid assembly strategy.Biotechnol Bioeng2018
29599516Enterobacter bugandensis: a novel enterobacterial species associated with severe clinical infection.Scientific Reports2018
29690922Flexible metagenome analysis using the MGX framework.Microbiome2018
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