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Author Details
Full Name
Mats Nilsson
Affiliation
Stockholm University
ORCID
Career Start Year
1988
Papers
214
H Index
50
Expertise
CM4AI Collaborator
Emma Lundberg (CM4AI)
PMID
Paper Title
Journal Title
Published Year
36646791
A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung.
Nat Cell Biol
2023
37612665
Highly multiplexed targeted sequencing strategy for infectious disease surveillance.
BMC Biotechnol
2023
37095395
Profiling spatiotemporal gene expression of the developing human spinal cord and implications for ependymoma origin.
Nat Neurosci
2023
36646791
A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung.
Nat Cell Biol
2023
37018847
Padlock Probe-Based Targeted In Situ Sequencing: Overview of Methods and Applications.
Annu Rev Genomics Hum Genet
2023
37543577
Spatial tumour gene signature discriminates neoplastic from non-neoplastic compartments in colon cancer: unravelling predictive biomarkers for relapse.
J Transl Med
2023
37612665
Highly multiplexed targeted sequencing strategy for infectious disease surveillance.
BMC Biotechnol
2023
37543577
Spatial tumour gene signature discriminates neoplastic from non-neoplastic compartments in colon cancer: unravelling predictive biomarkers for relapse.
J Transl Med
2023
37018847
Padlock Probe-Based Targeted In Situ Sequencing: Overview of Methods and Applications.
Annu Rev Genomics Hum Genet
2023
37095395
Profiling spatiotemporal gene expression of the developing human spinal cord and implications for ependymoma origin.
Nat Neurosci
2023
35086829
The discovAIR project: a roadmap towards the Human Lung Cell Atlas.
Eur Respir J
2022
36314900
Process integrated biosensors for real-time monitoring of antibodies for automated affinity purification.
Anal Methods
2022
35523173
Developmental landscape of human forebrain at a single-cell level identifies early waves of oligodendrogenesis.
Dev Cell
2022
35960757
De novo spatiotemporal modelling of cell-type signatures in the developmental human heart using graph convolutional neural networks.
PLoS Comput Biol
2022
36352222
Spatial genomics maps the structure, nature and evolution of cancer clones.
Nature
2022
35562352
Direct RNA targeted in situ sequencing for transcriptomic profiling in tissue.
Sci Rep
2022
35610641
Spatial and temporal heterogeneity in the lineage progression of fine oligodendrocyte subtypes.
BMC Biol
2022
35663950
Spatial Resolution of <i>Mycobacterium tuberculosis</i> Bacteria and Their Surrounding Immune Environments Based on Selected Key Transcripts in Mouse Lungs.
Front Immunol
2022
36471067
The landscape of tumor cell states and spatial organization in H3-K27M mutant diffuse midline glioma across age and location.
Nat Genet
2022
35086829
The discovAIR project: a roadmap towards the Human Lung Cell Atlas.
Eur Respir J
2022
35610641
Spatial and temporal heterogeneity in the lineage progression of fine oligodendrocyte subtypes.
BMC Biol
2022
35663950
Spatial Resolution of <i>Mycobacterium tuberculosis</i> Bacteria and Their Surrounding Immune Environments Based on Selected Key Transcripts in Mouse Lungs.
Front Immunol
2022
35562352
Direct RNA targeted in situ sequencing for transcriptomic profiling in tissue.
Sci Rep
2022
35523173
Developmental landscape of human forebrain at a single-cell level identifies early waves of oligodendrogenesis.
Dev Cell
2022
36471067
The landscape of tumor cell states and spatial organization in H3-K27M mutant diffuse midline glioma across age and location.
Nat Genet
2022
36314900
Process integrated biosensors for real-time monitoring of antibodies for automated affinity purification.
Anal Methods
2022
35960757
De novo spatiotemporal modelling of cell-type signatures in the developmental human heart using graph convolutional neural networks.
PLoS Comput Biol
2022
36352222
Spatial genomics maps the structure, nature and evolution of cancer clones.
Nature
2022
34331448
Correction to 'Hybridization-based in situ sequencing (HybISS) for spatially resolved transcriptomics in human and mouse brain tissue'.
Nucleic Acids Res
2021
33802488
Electrochemical Genosensing of <i>E. coli</i> Based on Padlock Probes and Rolling Circle Amplification.
Sensors (Basel)
2021
33823582
Evaluation of Immuno-Rolling Circle Amplification for Multiplex Detection and Profiling of Antigen-Specific Antibody Isotypes.
Anal Chem
2021
34332548
Matisse: a MATLAB-based analysis toolbox for in situ sequencing expression maps.
BMC Bioinformatics
2021
34331448
Correction to 'Hybridization-based in situ sequencing (HybISS) for spatially resolved transcriptomics in human and mouse brain tissue'.
Nucleic Acids Res
2021
34321664
Molecular architecture of the developing mouse brain.
Nature
2021
34429496
Comprehensive in situ mapping of human cortical transcriptomic cell types.
Commun Biol
2021
34637281
Rolling Circle Amplification in Integrated Microsystems: An Uncut Gem toward Massively Multiplexed Pathogen Diagnostics and Genotyping.
Acc Chem Res
2021
33823582
Evaluation of Immuno-Rolling Circle Amplification for Multiplex Detection and Profiling of Antigen-Specific Antibody Isotypes.
Anal Chem
2021
33802488
Electrochemical Genosensing of <i>E. coli</i> Based on Padlock Probes and Rolling Circle Amplification.
Sensors (Basel)
2021
34429496
Comprehensive in situ mapping of human cortical transcriptomic cell types.
Commun Biol
2021
34637281
Rolling Circle Amplification in Integrated Microsystems: An Uncut Gem toward Massively Multiplexed Pathogen Diagnostics and Genotyping.
Acc Chem Res
2021
34321664
Molecular architecture of the developing mouse brain.
Nature
2021
34332548
Matisse: a MATLAB-based analysis toolbox for in situ sequencing expression maps.
BMC Bioinformatics
2021
32394391
In Situ Sequencing: A High-Throughput, Multi-Targeted Gene Expression Profiling Technique for Cell Typing in Tissue Sections.
Methods Mol Biol
2020
31740815
Probabilistic cell typing enables fine mapping of closely related cell types in situ.
Nat Methods
2020
31837428
Digital Rolling Circle Amplification-Based Detection of Ebola and Other Tropical Viruses.
J Mol Diagn
2020
32057051
OPENchip: an on-chip in situ molecular profiling platform for gene expression analysis and oncogenic mutation detection in single circulating tumour cells.
Lab Chip
2020
31999596
The sweet detection of rolling circle amplification: Glucose-based electrochemical genosensor for the detection of viral nucleic acid.
Biosens Bioelectron
2020
31937309
Spatiotemporal mapping of RNA editing in the developing mouse brain using in situ sequencing reveals regional and cell-type-specific regulation.
BMC Biol
2020
32394391
In Situ Sequencing: A High-Throughput, Multi-Targeted Gene Expression Profiling Technique for Cell Typing in Tissue Sections.
Methods Mol Biol
2020
32935538
Single Cell RNA Expression Analysis Using Flow Cytometry Based on Specific Probe Ligation and Rolling Circle Amplification.
ACS Sens
2020
1 - 50 of 428
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row(s) 1 - 30 of 30
Collaborators
Jessica Svedlund
Co-authored papers
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Carolina W??hlby
Uppsala University
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6
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Uppsala University
Co-authored papers
6
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Karolinska Institutet
Co-authored papers
5
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Uppsala University
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KTH Royal Institute of Technology
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4
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Karolinska Institute
Co-authored papers
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Uppsala University
Co-authored papers
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Christos Samakovlis
Stockholm University, The Wenner-Gren Institute, Justus Liebig University of Giessen
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Alexandros Sountoulidis
Wenner-Gren Institute, Stockholm University
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3
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Wenner-Gren Institute, Stockholm University
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3
Ed S Lein
Allen Institute for Brain Science
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3
Andre Franke
Institute of Clinical Molecular Biology, Kiel University
Co-authored papers
2
Aydogan Ozcan
Co-authored papers
2
Paulo Czarnewski
Karolinska Institute, Center for Molecular Medicine
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Karolina Edlund
Leibniz Research Centre for Working Environment and Human Factors at TU Dortmund
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2
Ronald W Davis
Stanford University
Co-authored papers
2
Burcu Ayoglu
KTH - Royal Institute of Technology
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Karoly Szuhai
Leiden University Medical Center
Co-authored papers
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Xes??s M Abalo
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