| 37158954 | Highly diverse and unknown viruses may enhance Antarctic endoliths' adaptability. | Microbiome | 2023 |
| 35835965 | Distinct and Temporally Stable Assembly Mechanisms Shape Bacterial and Fungal Communities in Vineyard Soils. | Microb Ecol | 2023 |
| 35298630 | Rocks support a distinctive and consistent mycobiome across contrasting dry regions of Earth. | FEMS Microbiol Ecol | 2022 |
| 35484918 | Genome sequencing provides new insights on the distribution of Erwinia amylovora lineages in northern Italy. | Environ Microbiol Rep | 2022 |
| 33961223 | Genome Recovery, Functional Profiling, and Taxonomic Classification from Metagenomes. | Methods Mol Biol | 2021 |
| 33741058 | Pre-Cambrian roots of novel Antarctic cryptoendolithic bacterial lineages. | Microbiome | 2021 |
| 34867911 | Power Play of Commensal Bacteria in the Buccal Cavity of Female Nile Tilapia. | Front Microbiol | 2021 |
| 35136576 | Large-scale quality assessment of prokaryotic genomes with metashot/prok-quality. | F1000Res | 2021 |
| 34732823 | Interactions between parasitic helminths and gut microbiota in wild tropical primates from intact and fragmented habitats. | Sci Rep | 2021 |
| 34566914 | Breeding Strategy Shapes the Composition of Bacterial Communities in Female Nile Tilapia Reared in a Recirculating Aquaculture System. | Front Microbiol | 2021 |
| 32457237 | The Gut Microbiota Communities of Wild Arboreal and Ground-Feeding Tropical Primates Are Affected Differently by Habitat Disturbance. | mSystems | 2020 |
| 32065887 | Alpine headwaters emerging from glaciers and rock glaciers host different bacterial communities: Ecological implications for the future. | Sci Total Environ | 2020 |
| 33067437 | Large scale genome reconstructions illuminate Wolbachia evolution. | Nat Commun | 2020 |
| 32760129 | Raw milk and fecal microbiota of commercial Alpine dairy cows varies with herd, fat content and diet. | PLoS One | 2020 |
| 32114708 | Tissue age, orchard location and disease management influence the composition of fungal and bacterial communities present on the bark of apple trees. | Environ Microbiol | 2020 |
| 32139564 | Metagenomes in the Borderline Ecosystems of the Antarctic Cryptoendolithic Communities. | Microbiol Resour Announc | 2020 |
| 31699155 | Microbiome of vineyard soils is shaped by geography and management. | Microbiome | 2019 |
| 28859525 | Influence of essential oils in diet and life-stage on gut microbiota and fillet quality of rainbow trout (Oncorhynchus mykiss). | Int J Food Sci Nutr | 2018 |
| 30131118 | Host: Microbiome co-metabolic processing of dietary polyphenols - An acute, single blinded, cross-over study with different doses of apple polyphenols in healthy subjects. | Food Res Int | 2018 |
| 30442969 | Characterization of human breast tissue microbiota from core needle biopsies through the analysis of multi hypervariable 16S-rRNA gene regions. | Sci Rep | 2018 |
| 30382151 | Reduced diversity of gut microbiota in two Aedes mosquitoes species in areas of recent invasion. | Sci Rep | 2018 |
| 29617783 | A practical tool for maximal information coefficient analysis. | Gigascience | 2018 |
| 29192335 | Diversity and Cyclical Seasonal Transitions in the Bacterial Community in a Large and Deep Perialpine Lake. | Microb Ecol | 2018 |
| 28654220 | Temperature drives the assembly of endophytic communities' seasonal succession. | Environ Microbiol | 2017 |
| 28283029 | Legal immigrants: invasion of alien microbial communities during winter occurring desert dust storms. | Microbiome | 2017 |
| 28222761 | New evidences on the altered gut microbiota in autism spectrum disorders. | Microbiome | 2017 |
| 28377754 | Core Microbiota and Metabolome of <i>Vitis vinifera</i> L. cv. Corvina Grapes and Musts. | Front Microbiol | 2017 |
| 29127392 | SaccharomycesIDentifier, SID: strain-level analysis of Saccharomyces cerevisiae populations by using microsatellite meta-patterns. | Sci Rep | 2017 |
| 29081768 | Diet, Environments, and Gut Microbiota. A Preliminary Investigation in Children Living in Rural and Urban Burkina Faso and Italy. | Front Microbiol | 2017 |
| 29273717 | Strain profiling and epidemiology of bacterial species from metagenomic sequencing. | Nat Commun | 2017 |
| 26971496 | Evaluation of the effects of intrapartum antibiotic prophylaxis on newborn intestinal microbiota using a sequencing approach targeted to multi hypervariable 16S rDNA regions. | Appl Microbiol Biotechnol | 2016 |
| 27833598 | Alteration of Fecal Microbiota Profiles in Juvenile Idiopathic Arthritis. Associations with HLA-B27 Allele and Disease Status. | Front Microbiol | 2016 |
| 27536299 | Age and Gender Affect the Composition of Fungal Population of the Human Gastrointestinal Tract. | Front Microbiol | 2016 |
| 27473171 | Altered gut microbiota in Rett syndrome. | Microbiome | 2016 |
| 27572971 | Uncovering oral Neisseria tropism and persistence using metagenomic sequencing. | Nat Microbiol | 2016 |
| 27431457 | Insulin Resistance, Microbiota, and Fat Distribution Changes by a New Model of Vertical Sleeve Gastrectomy in Obese Rats. | Diabetes | 2016 |
| 26780037 | Dynamic changes in microbiota and mycobiota during spontaneous 'Vino Santo Trentino' fermentation. | Microb Biotechnol | 2016 |
| 25815895 | Explaining diversity in metagenomic datasets by phylogenetic-based feature weighting. | PLoS Comput Biol | 2015 |
| 26445280 | Habitat fragmentation is associated to gut microbiota diversity of an endangered primate: implications for conservation. | Sci Rep | 2015 |
| 26109056 | Comparison of RNA-seq and microarray-based models for clinical endpoint prediction. | Genome Biol | 2015 |
| 25988396 | MICCA: a complete and accurate software for taxonomic profiling of metagenomic data. | Sci Rep | 2015 |
| 24670764 | A promoter-level mammalian expression atlas. | Nature | 2014 |
| 25150839 | The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance. | Nat Biotechnol | 2014 |
| 23242262 | Minerva and minepy: a C engine for the MINE suite and its R, Python and MATLAB wrappers. | Bioinformatics | 2013 |
| 22875362 | TOFwave: reproducibility in biomarker discovery from time-of-flight mass spectrometry data. | Mol Biosyst | 2012 |
| 17006417 | SIAARTI recommendations for analgo-sedation in intensive care unit. | Minerva Anestesiol | 2006 |