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Author Details

Albin Sandelin
University of Copenhagen
2002
119
57
PMIDPaper TitleJournal TitlePublished Year
37962376JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles.Nucleic Acids Res2024
37962376JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles.Nucleic Acids Res2024
36533672Chronic acidosis rewires cancer cell metabolism through PPARα signaling.Int J Cancer2023
36408933Crosstalk between tumor acidosis, p53 and extracellular matrix regulates pancreatic cancer aggressiveness.Int J Cancer2023
37993804Lactate receptor GPR81 drives breast cancer growth and invasiveness through regulation of ECM properties and Notch ligand DLL4.BMC Cancer2023
37992398Detecting host responses to microbial stimulation using primary epithelial organoids.Gut Microbes2023
37436997Transcriptional and epigenomic profiling identifies YAP signaling as a key regulator of intestinal epithelium maturation.Sci Adv2023
36533672Chronic acidosis rewires cancer cell metabolism through PPARα signaling.Int J Cancer2023
37993804Lactate receptor GPR81 drives breast cancer growth and invasiveness through regulation of ECM properties and Notch ligand DLL4.BMC Cancer2023
37992398Detecting host responses to microbial stimulation using primary epithelial organoids.Gut Microbes2023
37436997Transcriptional and epigenomic profiling identifies YAP signaling as a key regulator of intestinal epithelium maturation.Sci Adv2023
36408933Crosstalk between tumor acidosis, p53 and extracellular matrix regulates pancreatic cancer aggressiveness.Int J Cancer2023
34850907JASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles.Nucleic Acids Res2022
36128426Computational identification of signals predictive for nuclear RNA exosome degradation pathway targeting.NAR Genom Bioinform2022
35349793Chromatin modifier HUSH co-operates with RNA decay factor NEXT to restrict transposable element expression.Mol Cell2022
34850907JASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles.Nucleic Acids Res2022
35132078Mesenchymal-epithelial crosstalk shapes intestinal regionalisation via Wnt and Shh signalling.Nat Commun2022
35349793Chromatin modifier HUSH co-operates with RNA decay factor NEXT to restrict transposable element expression.Mol Cell2022
36128426Computational identification of signals predictive for nuclear RNA exosome degradation pathway targeting.NAR Genom Bioinform2022
35132078Mesenchymal-epithelial crosstalk shapes intestinal regionalisation via Wnt and Shh signalling.Nat Commun2022
34058980TrancriptomeReconstructoR: data-driven annotation of complex transcriptomes.BMC Bioinformatics2021
34058980TrancriptomeReconstructoR: data-driven annotation of complex transcriptomes.BMC Bioinformatics2021
34266383Publisher Correction to: TrancriptomeReconstructoR: dataâ¿¿driven annotation of complex transcriptomes.BMC Bioinformatics2021
34613788Genomic Stability and Phenotypic Characteristics of Industrially Produced Lacticaseibacillus rhamnosus GG in a Yogurt Matrix.Appl Environ Microbiol2021
34613788Genomic Stability and Phenotypic Characteristics of Industrially Produced Lacticaseibacillus rhamnosus GG in a Yogurt Matrix.Appl Environ Microbiol2021
34266383Publisher Correction to: TrancriptomeReconstructoR: dataâ¿¿driven annotation of complex transcriptomes.BMC Bioinformatics2021
31605096Determinants of enhancer and promoter activities of regulatory elements.Nat Rev Genet2020
32075771A Two-Layered Targeting Mechanism Underlies Nuclear RNA Sorting by the Human Exosome.Cell Rep2020
32103605Organismal benefits of transcription speed control at gene boundaries.EMBO Rep2020
32213639Characterization of <i>Arabidopsis thaliana</i> Promoter Bidirectionality and Antisense RNAs by Inactivation of Nuclear RNA Decay Pathways.Plant Cell2020
31924618Lactobacillus rhamnosus GG Genomic and Phenotypic Stability in an Industrial Production Process.Appl Environ Microbiol2020
31701148JASPAR 2020: update of the open-access database of transcription factor binding profiles.Nucleic Acids Res2020
31605096Determinants of enhancer and promoter activities of regulatory elements.Nat Rev Genet2020
32710631The RNA exosome shapes the expression of key protein-coding genes.Nucleic Acids Res2020
32764426Cancer Cell Acid Adaptation Gene Expression Response Is Correlated to Tumor-Specific Tissue Expression Profiles and Patient Survival.Cancers (Basel)2020
33274667Personalized B cell response to the <i>Lactobacillus rhamnosus GG</i> probiotic in healthy human subjects: a randomized trial.Gut Microbes2020
31701148JASPAR 2020: update of the open-access database of transcription factor binding profiles.Nucleic Acids Res2020
31924618Lactobacillus rhamnosus GG Genomic and Phenotypic Stability in an Industrial Production Process.Appl Environ Microbiol2020
32075771A Two-Layered Targeting Mechanism Underlies Nuclear RNA Sorting by the Human Exosome.Cell Rep2020
32103605Organismal benefits of transcription speed control at gene boundaries.EMBO Rep2020
33274667Personalized B cell response to the <i>Lactobacillus rhamnosus GG</i> probiotic in healthy human subjects: a randomized trial.Gut Microbes2020
32710631The RNA exosome shapes the expression of key protein-coding genes.Nucleic Acids Res2020
32764426Cancer Cell Acid Adaptation Gene Expression Response Is Correlated to Tumor-Specific Tissue Expression Profiles and Patient Survival.Cancers (Basel)2020
32213639Characterization of <i>Arabidopsis thaliana</i> Promoter Bidirectionality and Antisense RNAs by Inactivation of Nuclear RNA Decay Pathways.Plant Cell2020
30566651Comprehensive profiling of the fission yeast transcription start site activity during stress and media response.Nucleic Acids Res2019
31585526CAGEfightR: analysis of 5'-end data using R/Bioconductor.BMC Bioinformatics2019
31722198A Functional Link between Nuclear RNA Decay and Transcriptional Control Mediated by the Polycomb Repressive Complex 2.Cell Rep2019
30566651Comprehensive profiling of the fission yeast transcription start site activity during stress and media response.Nucleic Acids Res2019
30672466PLZF targets developmental enhancers for activation during osteogenic differentiation of human mesenchymal stem cells.Elife2019
31327999A step-by-step guide to analyzing CAGE data using R/Bioconductor.F1000Res2019
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Collaborators

Piero Carninci
RIKEN Center for Integrative Medical Sciences
Co-authored papers 29
Robin Andersson
University of Copenhagen
Co-authored papers 28
Boris Lenhard
MRC London Institute of Medical Sciences
Co-authored papers 26
Yoshihide Hayashizaki
Center for Integrative Medical Sciences
Co-authored papers 25
Eivind Valen
University of Bergen
Co-authored papers 21
Hideya Kawaji
RIKEN Center for Integrative Medical Sciences
Co-authored papers 20
Yun Chen
Hospital of Obstetrics and Gynecology, Fudan University
Co-authored papers 20
Alistair R R Forrest
RIKEN Center for Integrative Medical Sciences
Co-authored papers 19
Wyeth W Wasserman
BC Children's Hospital Research Institute, University of British Columbia
Co-authored papers 18
Jette Bornholdt
University of Copenhagen
Co-authored papers 16
Torben Heick Jensen
Universitetsbyen 81, Aarhus University
Co-authored papers 16
Jun Kawai
RIKEN Center for Integrative Medical Sciences
Co-authored papers 14
Timo Lassmann
Telethon Kids Institute, University of Western Australia
Co-authored papers 13
Kristoffer Vitting-Seerup
Technical University of Denmark
Co-authored papers 12
Mette Boyd
University of Copenhagen
Co-authored papers 12
Xiaobei Zhao
University of Tennessee Health Science Center
Co-authored papers 12
Carsten O Daub
International Institute of Molecular and Cell Biology in Warsaw
Co-authored papers 11
Masayoshi Itoh
RIKEN Center for Integrative Medical Sciences
Co-authored papers 11
David A Hume
Mater Research Institute-UQ, Translational Research Institute
Co-authored papers 10
Christine A Wells
The University of Melbourne
Co-authored papers 10
Harukazu Suzuki
RIKEN Center for Integrative Medical Sciences
Co-authored papers 10
Anthony Mathelier
University of Oslo
Co-authored papers 10
Berit Lilje
Statens Serum Institut
Co-authored papers 9
Erik Arner
RIKEN Center for Integrative Medical Sciences (IMS)
Co-authored papers 9
Dave S B Hoon
Saint John's Cancer Institute at Saint John's Health Center
Co-authored papers 9
Nicolas Bertin
University Bordeaux, CNRS
Co-authored papers 9
Takeya Kasukawa
RIKEN Center for Integrative Medical Sciences
Co-authored papers 9
Mette J??rgensen
University of Copenhagen
Co-authored papers 8
Shintaro Katayama
Folkhalsan Research Center
Co-authored papers 8
Pär G Engström
Co-authored papers 8
Release 1.2