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Author Details

Anup Mahurkar
1994
55
24
PMIDPaper TitleJournal TitlePublished Year
36993621Peripheral blood transcriptomic profiling indicates molecular mechanisms commonly regulated by binge-drinking and placebo-effects.2023
36945543Matrix and analysis metadata standards (MAMS) to facilitate harmonization and reproducibility of single-cell data.bioRxiv2023
35104581Translatome changes in acute myeloid leukemia cells post exposure to pegcrisantaspase and venetoclax.Experimental Hematology2022
35867761The evolution of synaptic and cognitive capacity: Insights from the nervous system transcriptome of <i>Aplysia</i>.Proc Natl Acad Sci U S A2022
35319013Author Correction: Comparative cellular analysis of motor cortex in human, marmoset and mouse.Nature2022
35235019Advancing discovery in hearing research via biologist-friendly access to multi-omic data.Hum Genet2022
34635800Correction: Comprehensive molecular profiling of UV-induced metastatic melanoma in Nme1/Nme2-deficient mice reveals novel markers of survival in human patients.Oncogene2021
34172972gEAR: Gene Expression Analysis Resource portal for community-driven, multi-omic data exploration.Nat Methods2021
33926528Best practices on the differential expression analysis of multi-species RNA-seq.2021
33436511FADU: a Quantification Tool for Prokaryotic Transcriptomic Analyses.mSystems2021
33199836Venetoclax and pegcrisantaspase for complex karyotype acute myeloid leukemia.Leukemia2021
33305317HMPDACC: a Human Microbiome Project Multi-omic data resource.Nucleic Acids Res2021
34616066A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex.Nature2021
34616062Comparative cellular analysis of motor cortex in human, marmoset and mouse.Nature2021
34433909Comprehensive molecular profiling of UV-induced metastatic melanoma in Nme1/Nme2-deficient mice reveals novel markers of survival in human patients.Oncogene2021
34772701Mutagenesis of human genomes by endogenous mobile elements on a population scale.Genome Res2021
32389496Dissociation of TRIF bias and adjuvanticity.Vaccine2020
31851607Cost effective, experimentally robust differential-expression analysis for human/mammalian, pathogen and dual-species transcriptomics.Microb Genom2020
31095601Whole blood transcriptomic profiles can differentiate vulnerability to chronic low back pain.PLoS One2019
31796568Drug Repurposing of Bromodomain Inhibitors as Potential Novel Therapeutic Leads for Lymphatic Filariasis Guided by Multispecies Transcriptomics.mSystems2019
31467106TwinBLAST: When Two Is Better than One.Microbiol Resour Announc2019
31017901CD34 defines melanocyte stem cell subpopulations with distinct regenerative properties.PLoS Genet2019
31385273Dual RNA-Seq of Chlamydia and Host Cells.Methods in Molecular Biology2019
29529268Metaviz: interactive statistical and visual analysis of metagenomic data.Nucleic Acids Res2018
28535295Bioinformatic analysis of bacteria and host cell dual RNA-sequencing experiments.Briefings in Bioinformatics2018
29058705Identification of a gene expression signature associated with the metastasis suppressor function of NME1: prognostic value in human melanoma.Laboratory Investigation2018
30544973The miRNA Expression Profile of Experimental Autoimmune Encephalomyelitis Reveals Novel Potential Disease Biomarkers.International Journal of Molecular Sciences2018
30241496A comparative analysis of library prep approaches for sequencing low input translatome samples.BMC Genomics2018
29114401Aligner optimization increases accuracy and decreases compute times in multi-species sequence data.Microb Genom2017
28953883Strains, functions and dynamics in the expanded Human Microbiome Project.Nature2017
28542152Corrigendum: Brain feminization requires active repression of masculinization via DNA methylation.Nature Neuroscience2017
28449639CloVR-Comparative: automated, cloud-enabled comparative microbial genome sequence analysis pipeline.BMC Genomics2017
29022944Erratum: Strains, functions and dynamics in the expanded Human Microbiome Project.Nature2017
26156969Unique gene program of rat small resistance mesenteric arteries as revealed by deep RNA sequencing.Physiological Reports2015
25873374Functional dynamics of the gut microbiome in elderly people during probiotic consumption.mBio2015
25821913Brain feminization requires active repression of masculinization via DNA methylation.Nature Neuroscience2015
25858952New signaling pathways govern the host response to C. albicans infection in various niches.Genome Res2015
26124752RNA-Seq analysis of isolate- and growth phase-specific differences in the global transcriptomes of enteropathogenic Escherichia coli prototype isolates.Front Microbiol2015
25075113Circleator: flexible circular visualization of genome-associated data with BioPerl and SVG.Bioinformatics2014
25407537Map of open and closed chromatin domains in Drosophila genome.BMC Genomics2014
25403230MNKs act as a regulatory switch for eIF4E1 and eIF4E3 driven mRNA translation in DLBCL.Nat Commun2014
25303518Advancing the microbiome research community.Cell2014
24203705MetaRef: a pan-genomic database for comparative and community microbial genomics.Nucleic Acids Res2014
23345411Cardiomyocyte-specific perilipin 5 overexpression leads to myocardial steatosis and modest cardiac dysfunction.Journal of Lipid Research2013
24324615Simultaneous transcriptional profiling of bacteria and their host cells.PLoS One2013
22871609Microtubules underlie dysfunction in duchenne muscular dystrophy.Science Signaling2012
21677861The IGS Standard Operating Procedure for Automated Prokaryotic Annotation.Stand Genomic Sci2011
21460062Natural genetic variation caused by small insertions and deletions in the human genome.Genome Res2011
20413634Ergatis: a web interface and scalable software system for bioinformatics workflows.Bioinformatics2010
19850722GeMInA, Genomic Metadata for Infectious Agents, a geospatial surveillance pathogen database.Nucleic Acids Res2010
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