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Author Details

Tingfen Yan
Center for Precision Health Research, National Human Genome Research Institute
2003
31
16
PMIDPaper TitleJournal TitlePublished Year
36757889Human pancreatic islet microRNAs implicated in diabetes and related traits by large-scale genetic analysis.Proc Natl Acad Sci U S A2023
37603758Modeling islet enhancers using deep learning identifies candidate causal variants at loci associated with T2D and glycemic traits.Proc Natl Acad Sci U S A2023
37214922Functional interrogation of twenty type 2 diabetes-associated genes using isogenic hESC-derived β-like cells.bioRxiv2023
37365004Bone dysplasia in Hutchinson-Gilford progeria syndrome is associated with dysregulated differentiation and function of bone cell populations.Aging Cell2023
37333221Single-cell transcriptomic profiling of human pancreatic islets reveals genes responsive to glucose exposure over 24 hours.bioRxiv2023
35639484Protein expression of the gp78 E3 ligase predicts poor breast cancer outcome based on race.JCI Insight2022
34038741Genetic effects on liver chromatin accessibility identify disease regulatory variants.Am J Hum Genet2021
33526872Kaiso (ZBTB33) subcellular partitioning functionally links LC3A/B, the tumor microenvironment, and breast cancer survival.Commun Biol2021
32817962ACE2 expression in adipose tissue is associated with COVID-19 cardio-metabolic risk factors and cell type composition.medRxiv2020
31984226Single-cell transcriptomics from human pancreatic islets: sample preparation matters.Biol Methods Protoc2020
31911546Racial Differences in the Association Between Luminal Master Regulator Gene Expression Levels and Breast Cancer Survival.Clin Cancer Res2020
31534138Epigenetic re-wiring of breast cancer by pharmacological targeting of C-terminal binding protein.Cell Death Dis2019
22344655Leptospire genomic diversity revealed by microarray-based comparative genomic hybridization.Appl Environ Microbiol2012
21602393Shewanella oneidensis MR-1 sensory box protein involved in aerobic and anoxic growth.Appl Environ Microbiol2011
18714347Generation and validation of a Shewanella oneidensis MR-1 clone set for protein expression and phage display.PLoS One2008
17874092Influence of bicarbonate, sulfate, and electron donors on biological reduction of uranium and microbial community composition.Appl Microbiol Biotechnol2007
16083982Confidence intervals of similarity values determined for cloned SSU rRNA genes from environmental samples.J Microbiol Methods2006
16751567Transcriptome of a Nitrosomonas europaea mutant with a disrupted nitrite reductase gene (nirK).Appl Environ Microbiol2006
16874554Stability in a denitrifying fluidized bed reactor.Microb Ecol2006
16867143Diversity of functional genes for methanotrophs in sediments associated with gas hydrates and hydrocarbon seeps in the Gulf of Mexico.FEMS Microbiol Ecol2006
16452448Transcriptome profiling of Shewanella oneidensis gene expression following exposure to acidic and alkaline pH.J Bacteriol2006
16553835Transcript profiles of Nitrosomonas europaea during growth and upon deprivation of ammonia and carbonate.FEMS Microbiol Lett2006
16683598Phylogenetic and functional biomakers as indicators of bacterial community responses to mixed-waste contamination.Environ Sci Technol2006
16391131Cellular response of Shewanella oneidensis to strontium stress.Appl Environ Microbiol2006
15774893Transcriptome analysis of Shewanella oneidensis MR-1 in response to elevated salt conditions.J Bacteriol2005
16267302Functional genomic analysis of three nitrogenase isozymes in the photosynthetic bacterium Rhodopseudomonas palustris.J Bacteriol2005
16329960Impacts on microbial communities and cultivable isolates from groundwater contaminated with high levels of nitric acid-uranium waste.FEMS Microbiol Ecol2005
15516594Global transcriptome analysis of the heat shock response of Shewanella oneidensis.J Bacteriol2004
15576789Transcriptomic and proteomic characterization of the Fur modulon in the metal-reducing bacterium Shewanella oneidensis.J Bacteriol2004
15528515Coupling of functional gene diversity and geochemical data from environmental samples.Appl Environ Microbiol2004
12542709Molecular diversity and characterization of nitrite reductase gene fragments (nirK and nirS) from nitrate- and uranium-contaminated groundwater.Environ Microbiol2003
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Collaborators

Jizhong Zhou
Institute for Environmental Genomics, University of Oklahoma
Co-authored papers 13
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Institute for Environmental Genomics, University of Oklahoma
Co-authored papers 9
Matthew W Fields
Center for Biofilm Engineering (CBE), Montana State University
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Co-authored papers 8
Narisu Narisu
Co-authored papers 8
Michael R Erdos
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Co-authored papers 8
Lori L Bonnycastle
Co-authored papers 7
Amy J Swift
Co-authored papers 5
Adam P Arkin
Lawrence Berkeley National Laboratory
Co-authored papers 4
Stephen M Hewitt
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Co-authored papers 4
Eric J Alm
Massachusetts Institute of Technology 21 Ames St. Cambridge
Co-authored papers 4
J Zhou
Co-authored papers 3
Laura J Scott
Co-authored papers 2
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Antonino Zito
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Case Western Reserve University
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Markku Laakso
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Allan M Weissman
Center for Cancer Research, National Institutes of Health
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Michael L Stitzel
Institute for Systems Genomics
Co-authored papers 1
George M Weinstock
The Genome Center at Washington University, Washington University School of Medicine
Co-authored papers 1
Jaakko Tuomilehto
Co-authored papers 1
Jordana T Bell
King's College London
Co-authored papers 1
Release 1.2