Author details

Full Name

Paola Roncaglia

Affiliation

European Bioinformatics Institute (EMBL-EBI)

ORCID

Career Start Year

2000

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36511598	COVoc and COVTriage: novel resources to support literature triage.	Bioinformatics	2023
37324543	A community effort for COVID-19 Ontology Harmonization.	CEUR Workshop Proc	2022
33045747	Open Targets Genetics: systematic identification of trait-associated genes using large-scale genetics and functional genomics.	Nucleic Acids Res	2021
32417785	Gene Ontology Curation of Neuroinflammation Biology Improves the Interpretation of Alzheimer's Disease Gene Expression Data.	J Alzheimers Dis	2020
29455577	Exploring autophagy with Gene Ontology.	Autophagy	2018
30501127	Improving the Gene Ontology Resource to Facilitate More Informative Analysis and Interpretation of Alzheimer's Disease Data.	Genes (Basel)	2018
29440116	Improving Interpretation of Cardiac Phenotypes and Enhancing Discovery With Expanded Knowledge in the Gene Ontology.	Circ Genom Precis Med	2018
29177046	The Gene Ontology of eukaryotic cilia and flagella.	Cilia	2017
27076901	Extending gene ontology in the context of extracellular RNA and vesicle communication.	J Biomed Semantics	2016
26538599	Tools and data services registry: a community effort to document bioinformatics resources.	Nucleic Acids Res	2016
27199664	Effects of Pin1 Loss in Hdh(Q111) Knock-in Mice.	Front Cell Neurosci	2016
26047810	Using Gene Ontology to describe the role of the neurexin-neuroligin-SHANK complex in human, mouse and rat and its relevance to autism.	BMC Bioinformatics	2015
26510930	Blood transcriptomics of drug-naÃ¯ve sporadic Parkinson's disease patients.	BMC Genomics	2015
24835311	Dissecting the transcriptional phenotype of ribosomal protein deficiency: implications for Diamond-Blackfan Anemia.	Gene	2014
25937883	TermGenie - a web-application for pattern-based ontology class generation.	J Biomed Semantics	2014
25164183	Mesencephalic dopaminergic neurons express a repertoire of olfactory receptors and respond to odorant-like molecules.	BMC Genomics	2014
23161678	Gene Ontology annotations and resources.	Nucleic Acids Res	2013
24052948	DNA damage in mammalian neural stem cells leads to astrocytic differentiation mediated by BMP2 signaling through JAK-STAT.	Stem Cell Reports	2013
24093723	The Gene Ontology (GO) Cellular Component Ontology: integration with SAO (Subcellular Anatomy Ontology) and other recent developments.	J Biomed Semantics	2013
23895341	Dovetailing biology and chemistry: integrating the Gene Ontology with the ChEBI chemical ontology.	BMC Genomics	2013
23951361	Adhesion to carbon nanotube conductive scaffolds forces action-potential appearance in immature rat spinal neurons.	PLoS One	2013
23777634	Genome-wide expression profiling and functional characterization of SCA28 lymphoblastoid cell lines reveal impairment in cell growth and activation of apoptotic pathways.	BMC Med Genomics	2013
21406608	Developmental influence of the cellular prion protein on the gene expression profile in mouse hippocampus.	Physiol Genomics	2011
21769946	Motor neuron impairment mediated by a sumoylated fragment of the glial glutamate transporter EAAT2.	Glia	2011
21725324	Direct generation of functional dopaminergic neurons from mouse and human fibroblasts.	Nature	2011
20395301	Parkinson disease-associated DJ-1 is required for the expression of the glial cell line-derived neurotrophic factor receptor RET in human neuroblastoma cells.	J Biol Chem	2010
19717439	Unexpected expression of alpha- and beta-globin in mesencephalic dopaminergic neurons and glial cells.	Proc Natl Acad Sci U S A	2009
19925663	A transcriptome analysis identifies molecular effectors of unconjugated bilirubin in human neuroblastoma SH-SY5Y cells.	BMC Genomics	2009
19887551	Characterization of caspase-dependent and caspase-independent deaths in glioblastoma cells treated with inhibitors of the ubiquitin-proteasome system.	Mol Cancer Ther	2009
19765279	Fibroblasts from patients with Diamond-Blackfan anaemia show abnormal expression of genes involved in protein synthesis, amino acid metabolism and cancer.	BMC Genomics	2009
19052641	Large differences in aging phenotype between strains of the short-lived annual fish Nothobranchius furzeri.	PLoS One	2008
15729342	The genome of the protist parasite Entamoeba histolytica.	Nature	2005
16164422	Annual fishes of the genus Nothobranchius as a model system for aging research.	Aging Cell	2005
15653466	The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans.	Science	2005
15567176	Genomic organization and expression of 23 new genes from MATalpha locus of Cryptococcus neoformans var. gattii.	Biochem Biophys Res Commun	2005
12324414	Pore topology of the hyperpolarization-activated cyclic nucleotide-gated channel from sea urchin sperm.	Biophys J	2002
11316260	Cyclic-nucleotide-gated channels: pore topology in desensitizing E19A mutants.	Pflugers Arch	2001
10958339	Cyclic nucleotide-gated channels: intra- and extracellular accessibility to Cd2+ of substituted cysteine residues within the P-loop.	Pflugers Arch	2000

1 - 38 of 38

Tommaso Mazza

Fondazione IRCCS Casa Sollievo della Sofferenza,71013

Career Start Year 2005

Number of shared co-authors 0

Anja Stefanski

Universitatsklinikum

Career Start Year 2003

Number of shared co-authors 0

Fang Cai

Department of Pharmacy, Fuzhou Second Hospital

Career Start Year 2003

Number of shared co-authors 0

Todd E Scheetz

the University of Iowa Carver College of Medicine

Career Start Year 2000

Number of shared co-authors 5

Carlos Prieto

Hospital Rey Juan Carlos

Career Start Year 2000

Number of shared co-authors 6

David K Crossman

University of Alabama at Birmingham

Career Start Year 2000

Number of shared co-authors 0

Peter White

The Ohio State University

Career Start Year 2000

Number of shared co-authors 0

Rabah Soliymani

Meilahti Clinical Proteomics Core Facility, University of Helsinki

Career Start Year 1999

Number of shared co-authors 0

Thomas L Casavant

The University of Iowa College of Nursing.

Career Start Year 1999

Number of shared co-authors 10

Shawn Levy

HudsonAlpha Institute for Biotechnology

Career Start Year 1999

Number of shared co-authors 1

Lars Juhl Jensen

Novo Nordisk Foundation Center for Protein Research, University of Copenhagen

Career Start Year 1998

Number of shared co-authors 16

Peter A C 't Hoen

Radboud University Medical Center

Career Start Year 1998

Number of shared co-authors 14

Yong-Hwan Kim

Delaware State University

Career Start Year 1997

Number of shared co-authors 0

Georg Fuellen

Rostock University Medical Center

Career Start Year 1996

Number of shared co-authors 2

Sudeshna Das

Massachusetts General Hospital

Career Start Year 1996

Number of shared co-authors 6

Herbert Schulz

Clinic for Plastic, Otto von Guericke University

Career Start Year 1995

Number of shared co-authors 8

Elizabeth A Worthey

Heersink School of Medicine, The University of Alabama at Birmingham

Career Start Year 1995

Number of shared co-authors 22

Paul Pavlidis

University of British Columbia

Career Start Year 1994

Number of shared co-authors 19

Bianca Habermann

Aix Marseille University, CNRS, Turing Center for Living Systems

Career Start Year 1993

Number of shared co-authors 4

Kevin G Becker

National Institute on Aging, National Institutes of Health

Career Start Year 1992

Number of shared co-authors 8

Zugen Chen

David Geffen School of Medicine, University of California los angeles

Career Start Year 1992

Number of shared co-authors 0

Miguel A Andrade-Navarro

Institute of Organismic and Molecular Evolution, Johannes Gutenberg University

Career Start Year 1991

Number of shared co-authors 6

Winston Hide

Harvard Medical School

Career Start Year 1991

Number of shared co-authors 31

Javier De Las Rivas

Cancer Research Centre (IBMCC/CSIC/USAL/IBSAL)

Career Start Year 1989

Number of shared co-authors 10

Shankar Subramaniam

University of California

Career Start Year 1989

Number of shared co-authors 3

Chris P Ponting

The University of Edinburgh

Career Start Year 1989

Number of shared co-authors 20

Yasushi Okazaki

Intractable Disease Research Center, Graduate School of Medicine, Juntendo University

Career Start Year 1989

Number of shared co-authors 21

Michal Linial

Institute of Life Sciences, The Hebrew University of Jerusalem

Career Start Year 1986

Number of shared co-authors 19

Jonathan Pevsner

Kennedy Krieger Institute, Johns Hopkins University School of Medicine

Career Start Year 1984

Number of shared co-authors 0

John R Yates

TheScripps Research Institute

Career Start Year 1960

Number of shared co-authors 16

row(s) 1 - 30 of 30

Stefano Gustincich

Istituto Italiano di Tecnologia

Co-authored papers 14

David P Hill

Co-authored papers 6

Ruth C Lovering

University College London, Institute for Cardiovascular Science

Co-authored papers 6

Jane Lomax

Wellcome Sanger Institute

Co-authored papers 5

Rebecca E Foulger

Queen Mary University of London

Co-authored papers 5

Tanya Z Berardini

Carnegie Institution for Science

Co-authored papers 5

Rachael P Huntley

Institute of Cardiovascular Science, University College London

Co-authored papers 5

Helen Parkinson

European Bioinformatics Institute

Co-authored papers 5

Dejan Lazarevic

Co-authored papers 4

Christopher J Mungall

International Society for Biocuration, Lawrence Berkeley National Laboratory, University of Edinburgh, University of Edinburgh School of Biological Sciences

Co-authored papers 4

Maria J Martin

European Bioinformatics Institute (EMBL-EBI)

Co-authored papers 3

Heiko Dietze

Lawrence Berkeley National Laboratory

Co-authored papers 3

Harold J Drabkin

Massachusetts Institute of Technology

Co-authored papers 3

David Osumi-Sutherland

European Bioinformatics Institute