Author details

Full Name

Xiaojing Wang

Affiliation

ORCID

Career Start Year

2012

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
33420056	Integrated analysis of telomerase enzymatic activity unravels an association with cancer stemness and proliferation.	Nat Commun	2021
32810235	PCAT: an integrated portal for genomic and preclinical testing data of pediatric cancer patient-derived xenograft models.	Nucleic Acids Res	2021
32699191	A PoleP286R mouse model of endometrial cancer recapitulates high mutational burden and immunotherapy response.	JCI insight	2020
30926639	Prospective Clinical Sequencing of Adult Glioma.	Mol Cancer Ther	2019
30610011	PepQuery enables fast, accurate, and convenient proteomic validation of novel genomic alterations.	Genome Res	2019
29386051	The proBAM and proBed standard formats: enabling a seamless integration of genomics and proteomics data.	Genome Biol	2018
29222161	Detection of Proteome Diversity Resulted from Alternative Splicing is Limited by Trypsin Cleavage Specificity.	Mol Cell Proteomics	2018
27977206	CanProVar 2.0: An Updated Database of Human Cancer Proteome Variation.	J Proteome Res	2017
28456751	Methods, Tools and Current Perspectives in Proteogenomics.	Mol Cell Proteomics	2017
28625833	Colorectal Cancer Cell Line Proteomes Are Representative of Primary Tumors and Predict Drug Sensitivity.	Gastroenterology	2017
28613820	Protein Modification by Endogenously Generated Lipid Electrophiles: Mitochondria as the Source and Target.	ACS Chem Biol	2017
26113616	Activation of the Endogenous Renin-Angiotensin-Aldosterone System or Aldosterone Administration Increases Urinary Exosomal Sodium Channel Excretion.	Journal of the American Society of Nephrology : JASN	2016
27340238	Oncogenic KRAS and BRAF Drive Metabolic Reprogramming in Colorectal Cancer.	Mol Cell Proteomics	2016
27316337	PGA: an R/Bioconductor package for identification of novel peptides using a customized database derived from RNA-Seq.	BMC Bioinformatics	2016
26657539	proBAMsuite, a Bioinformatics Framework for Genome-Based Representation and Analysis of Proteomics Data.	Mol Cell Proteomics	2016
26156868	Revealing Missing Human Protein Isoforms Based on Ab Initio Prediction, RNA-seq and Proteomics.	Sci Rep	2015
25698088	Identification of HPV integration and gene mutation in HeLa cell line by integrated analysis of RNA-Seq and MS/MS data.	J Proteome Res	2015
26483142	Integrating mRNA and Protein Sequencing Enables the Detection and Quantitative Profiling of Natural Protein Sequence Variants of Populus trichocarpa.	J Proteome Res	2015
26217491	Corrigendum: Proteomic analysis of colon and rectal carcinoma using standard and customized databases.	Sci Data	2015
25043054	Proteogenomic characterization of human colon and rectal cancer.	Nature	2014
25320007	Nuclear factor of activated T-cell activity is associated with metastatic capacity in colon cancer.	Cancer Res	2014
25266668	Leveraging the complementary nature of RNA-Seq and shotgun proteomics data.	Proteomics	2014
24247723	Proteogenomic analysis reveals unanticipated adaptations of colorectal tumor cells to deficiencies in DNA mismatch repair.	Cancer Res	2014
24792918	Integrating genomic, transcriptomic, and interactome data to improve Peptide and protein identification in shotgun proteomics.	J Proteome Res	2014
24058055	customProDB: an R package to generate customized protein databases from RNA-Seq data for proteomics search.	Bioinformatics	2013
22103967	Protein identification using customized protein sequence databases derived from RNA-Seq data.	J Proteome Res	2012