Author details

Full Name

John Rush

Affiliation

Cell Signaling Technology Inc.

ORCID

Career Start Year

1987

Papers

H Index

Expertise

CM4AI Collaborator

Nevan J Krogan (CM4AI)

PMID	Paper Title	Journal Title	Published Year
33710330	Correction: RSK phosphorylates SOS1 creating 14-3-3-docking sites and negatively regulating MAPK activation.	Biochem J	2021
24493012	Combinatorial approach for large-scale identification of linked peptides from tandem mass spectrometry spectra.	Mol Cell Proteomics	2014
25000943	Stable-isotope-labeled histone peptide library for histone post-translational modification and variant quantification by mass spectrometry.	Mol Cell Proteomics	2014
24437954	A turn-key approach for large-scale identification of complex posttranslational modifications.	J Proteome Res	2014
23358503	Phosphotyrosine signaling proteins that drive oncogenesis tend to be highly interconnected.	Mol Cell Proteomics	2013
23749301	Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.	Nat Methods	2013
22345495	TSLP signaling network revealed by SILAC-based phosphoproteomics.	Mol Cell Proteomics	2012
22724890	A high-throughput, multiplexed kinase assay using a benchtop orbitrap mass spectrometer to investigate the effect of kinase inhibitors on kinase signaling pathways.	Anal Chem	2012
22807455	Comparative phosphoproteomic analysis of neonatal and adult murine brain.	Proteomics	2012
22827337	RSK phosphorylates SOS1 creating 14-3-3-docking sites and negatively regulating MAPK activation.	Biochem J	2012
22446692	A proteomics approach for the identification and cloning of monoclonal antibodies from serum.	Nat Biotechnol	2012
22570254	Identification of anaplastic lymphoma kinase as a potential therapeutic target in ovarian cancer.	Cancer Res	2012
22316387	Multiplex targeted proteomic assay for biomarker detection in plasma: a pancreatic cancer biomarker case study.	J Proteome Res	2012
21278249	Polyubiquitin linkage profiles in three models of proteolytic stress suggest the etiology of Alzheimer disease.	J Biol Chem	2011
21963094	Global identification of modular cullin-RING ligase substrates.	Cell	2011
21906983	Systematic and quantitative assessment of the ubiquitin-modified proteome.	Mol Cell	2011
21552520	Survey of activated FLT3 signaling in leukemia.	PLoS One	2011
21293459	Absolute quantification of protein and post-translational modification abundance with stable isotope-labeled synthetic peptides.	Nat Protoc	2011
21253578	Survey of tyrosine kinase signaling reveals ROS kinase fusions in human cholangiocarcinoma.	PLoS One	2011
19996410	Induction of myeloproliferative disorder and myelofibrosis by thrombopoietin receptor W515 mutants is mediated by cytosolic tyrosine 112 of the receptor.	Blood	2010
21145461	Dynamics of cullin-RING ubiquitin ligase network revealed by systematic quantitative proteomics.	Cell	2010
20686178	Pathway-based identification of biomarkers for targeted therapeutics: personalized oncology with PI3K pathway inhibitors.	Sci Transl Med	2010
20736484	Akt-RSK-S6 kinase signaling networks activated by oncogenic receptor tyrosine kinases.	Sci Signal	2010
20506281	Fyn promotes phosphorylation of collapsin response mediator protein 1 at tyrosine 504, a novel, isoform-specific regulatory site.	J Cell Biochem	2010
20377248	Gas-phase rearrangements do not affect site localization reliability in phosphoproteomics data sets.	J Proteome Res	2010
18845790	The enzymatic activity of 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase is enhanced by NPM-ALK: new insights in ALK-mediated pathogenesis and the treatment of ALCL.	Blood	2009
20038682	The Chlamydomonas reinhardtii BBSome is an IFT cargo required for export of specific signaling proteins from flagella.	J Cell Biol	2009
19801977	Sensitive multiplexed analysis of kinase activities and activity-based kinase identification.	Nat Biotechnol	2009
19735572	The morphology and biochemistry of nanostructures provide evidence for synthesis and signaling functions in human cerebrospinal fluid.	Cerebrospinal Fluid Res	2009
19345192	Quantitative proteomics reveals the function of unconventional ubiquitin chains in proteasomal degradation.	Cell	2009
19564600	A site-specific, multiplexed kinase activity assay using stable-isotope dilution and high-resolution mass spectrometry.	Proc Natl Acad Sci U S A	2009
19105742	Mass spectrometry based targeted protein quantification: methods and applications.	J Proteome Res	2009
19156127	Linear combinations of docking affinities explain quantitative differences in RTK signaling.	Mol Syst Biol	2009
18180459	Signaling networks assembled by oncogenic EGFR and c-Met.	Proc Natl Acad Sci U S A	2008
18721752	System-wide investigation of ErbB4 reveals 19 sites of Tyr phosphorylation that are unusually selective in their recruitment properties.	Chem Biol	2008
18493663	A quantitative study of the recruitment potential of all intracellular tyrosine residues on EGFR, FGFR1 and IGF1R.	Mol Biosyst	2008
18186601	Application of targeted quantitative proteomics analysis in human cerebrospinal fluid using a liquid chromatography matrix-assisted laser desorption/ionization time-of-flight tandem mass spectrometer (LC MALDI TOF/TOF) platform.	J Proteome Res	2008
17484111	The absolute quantification strategy: application to phosphorylation profiling of human separase serine 1126.	Methods Mol Biol	2007
18083107	Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer.	Cell	2007
18077418	Profiling of UV-induced ATM/ATR signaling pathways.	Proc Natl Acad Sci U S A	2007
17360941	A novel fusion of RBM6 to CSF1R in acute megakaryoblastic leukemia.	Blood	2007
17252008	Phosphoproteomic analysis identifies the M0-91 cell line as a cellular model for the study of TEL-TRKC fusion-associated leukemia.	Leukemia	2007
16204703	Phosphorylation analysis by mass spectrometry: myths, facts, and the consequences for qualitative and quantitative measurements.	Mol Cell Proteomics	2006
16799550	Quantitative analysis of in vitro ubiquitinated cyclin B1 reveals complex chain topology.	Nat Cell Biol	2006
16964243	A probability-based approach for high-throughput protein phosphorylation analysis and site localization.	Nat Biotechnol	2006
16946300	Phosphotyrosine profiling identifies the KG-1 cell line as a model for the study of FGFR1 fusions in acute myeloid leukemia.	Blood	2006
16507876	Relative and absolute quantification of postsynaptic density proteome isolated from rat forebrain and cerebellum.	Mol Cell Proteomics	2006
16497976	A common phosphotyrosine signature for the Bcr-Abl kinase.	Blood	2006
15592455	Immunoaffinity profiling of tyrosine phosphorylation in cancer cells.	Nat Biotechnol	2005
15951569	Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules.	Mol Cell Proteomics	2005

1 - 50 of 66

Erik J Soderblom

Center for Genomic and Computational Biology, Duke University

Career Start Year 2003

Number of shared co-authors 1

Feng Yang

Howard Hughes Medical Institute, University of California San Diego

Career Start Year 2003

Number of shared co-authors 1

Marina A Gritsenko

Pacific Northwest National Laboratory

Career Start Year 2000

Number of shared co-authors 4

Jayantha Gunaratne

Institute of Molecular and Cell Biology

Career Start Year 2000

Number of shared co-authors 1

Paul Taylor

Hospital for Sick Children

Career Start Year 1999

Number of shared co-authors 1

Maria D Person

Center for Biomedical Research Support, The University of Texas at Austin

Career Start Year 1999

Number of shared co-authors 1

Greg T Cantin

Amgen Inc.

Career Start Year 1998

Number of shared co-authors 2

Boris Ma??ek

Interfaculty Institute for Cell Biology, University of Tubingen

Career Start Year 1998

Number of shared co-authors 1

Roman K??rner

Max Planck Institute of Biochemistry

Career Start Year 1996

Number of shared co-authors 1

Martin R Larsen

University of Southern Denmark

Career Start Year 1995

Number of shared co-authors 6

Brian Raught

Princess Margaret Cancer Centre, University Health Network

Career Start Year 1994

Number of shared co-authors 7

Yasushi Ishihama

Graduate School of Pharmaceutical Sciences, Kyoto University

Career Start Year 1994

Number of shared co-authors 2

Nicholas E Sherman

University of Virginia

Career Start Year 1994

Number of shared co-authors 1

Matthias Gstaiger

Institute of Molecular Systems Biology, ETH Zurich

Career Start Year 1994

Number of shared co-authors 1

Anne-Claude Gingras

Lunenfeld-Tanenbaum Research Institute

Career Start Year 1994

Number of shared co-authors 7

Jens S Andersen

University of Southern Denmark

Career Start Year 1993

Number of shared co-authors 4

Andrew Emili

Boston University School of Medicine, Boston University

Career Start Year 1991

Number of shared co-authors 3

Karl Mechtler

IMP-Institute of Molecular Pathology

Career Start Year 1990

Number of shared co-authors 1

Matthias Mann

Max-Planck Institute of Biochemistry

Career Start Year 1989

Number of shared co-authors 6

Thomas A Neubert

Neuroscience Institute, NYU Grossman School of Medicine

Career Start Year 1986

Number of shared co-authors 4

Michael F Moran

Hospital for Sick Children, University of Toronto

Career Start Year 1985

Number of shared co-authors 2

Brian T Chait

The Rockefeller University

Career Start Year 1984

Number of shared co-authors 3

Hediye Erdjument-Bromage

Neuroscience Institute, NYU Grossman School of Medicine

Career Start Year 1984

Number of shared co-authors 3

Jeffrey Shabanowitz

University of Virginia

Career Start Year 1980

Number of shared co-authors 4

Steven A Carr

Broad Institute of MIT and Harvard

Career Start Year 1980

Number of shared co-authors 5

Ryuji Kobayashi

Tokyo University of Science

Career Start Year 1979

Number of shared co-authors 0

Tony Hunter

Salk Institute for Biological Studies

Career Start Year 1968

Number of shared co-authors 0

Donald F Hunt

University of Virginia

Career Start Year 1968

Number of shared co-authors 4

Alma L Burlingame

Department of Pharmaceutical Chemistry, University of California san francisco

Career Start Year 1964

Number of shared co-authors 8

John R Yates

TheScripps Research Institute

Career Start Year 1960

Number of shared co-authors 8

row(s) 1 - 30 of 30

Steven P Gygi

Harvard Medical School

Co-authored papers 15

Michael J Comb

Co-authored papers 13

Judit Vill??n

University of Washington

Co-authored papers 8

Ailan Guo

College of Animal Medicine, Xinjiang Agricultural University

Co-authored papers 7

Alexis Kaushansky

Seattle Children's Research Institute, University of Washington

Co-authored papers 4

Brian J Druker

Oregon Health & Science University

Co-authored papers 3

Ruedi Aebersold

Institute of Molecular Systems Biology, ETH Zurich

Co-authored papers 2

Jeffrey W Tyner

Oregon Health & Science University School of Medicine

Co-authored papers 2

Klarisa Rikova

Co-authored papers 2

Philip E Bourne

University of Virginia

Co-authored papers 2

Philippe P Roux

IRIC - University of Montreal

Co-authored papers 2

David R Goodlett

University of Victoria

Co-authored papers 2

Ronald C Hendrickson

Memorial Sloan Kettering Cancer Center

Co-authored papers 2

Jian Wang

Co-authored papers 2

Marc M Loriaux

Knight Cancer Institute, Oregon Health & Science University

Co-authored papers 2

Nuno Bandeira

University of California

Co-authored papers 2

Genevi??ve Lavoie

Institute for Research in Immunology and Cancer (IRIC)

Co-authored papers 2

Alejandro Wolf-Yadlin

University of Washington

Co-authored papers 2

J. Wade Harper

Harvard Medical School

Co-authored papers 2

George M Church

Harvard Medical School

Co-authored papers 1

Ole N Jensen

VILLUM Center for Bioanalytical Sciences, University of Southern Denmark

Co-authored papers 1

Nevan J Krogan (CM4AI)

University of California San Francisco

Co-authored papers 1

James J Lah

Goizueta Alzheimer's Disease Research Center, Emory University School of Medicine

Co-authored papers 1

Edward L Huttlin

Harvard Medical School

Co-authored papers 1

Shelley L Berger

Penn Epigenetics Institute, Perelman School of Medicine

Co-authored papers 1

Lewis C Cantley

Co-authored papers 1

Thomas J Montine

Stanford University

Co-authored papers 1

Forest M White

Massachusetts Institute of Technology

Co-authored papers 1

Jimmy K Eng

University of Washington

Co-authored papers 1

Benjamin A Garcia

University of Pennsylvania

Co-authored papers 1

1 - 30

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