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Author Details

Amit G Deshwar
University of Toronto
2013
13
10
PMIDPaper TitleJournal TitlePublished Year
36482170Author Correction: Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig.Nat Commun2022
33398189A practical guide to cancer subclonal reconstruction from DNA sequencing.Nat Methods2021
34388351Transcriptome-Wide Off-Target Effects of Steric-Blocking Oligonucleotides.Nucleic Acid Ther2021
32284880<i>ATP7B</i> variant c.1934Tâ¿¿&gt;â¿¿G p.Met645Arg causes Wilson disease by promoting exon 6 skipping.NPJ Genom Med2020
29949959COSSMO: predicting competitive alternative splice site selection using deep learning.Bioinformatics2018
28714989Correction of a splicing defect in a mouse model of congenital muscular dystrophy type 1A using a homology-directed-repair-independent mechanism.Nat Med2017
25592565Comparing nonparametric Bayesian tree priors for clonal reconstruction of tumors.Pac Symp Biocomput2015
25972088ISOpureR: an R implementation of a computational purification algorithm of mixed tumour profiles.BMC Bioinformatics2015
25786235PhyloWGS: reconstructing subclonal composition and evolution from whole-genome sequencing of tumors.Genome Biol2015
24123674PLIDA: cross-platform gene expression normalization using perturbed topic models.Bioinformatics2014
24484323Inferring clonal evolution of tumors from single nucleotide somatic mutations.BMC Bioinformatics2014
23537167Computational purification of individual tumor gene expression profiles leads to significant improvements in prognostic prediction.Genome Med2013
24098326Identifying cancer specific functionally relevant miRNAs from gene expression and miRNA-to-gene networks using regularized regression.PLoS One2013
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Collaborators

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Michael D Wilson
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David C Wedge
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Catalina Anghel
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Maxime Tarabichi
ULB-Cancer Research Center (U-CRC), Universite Libre de Bruxelles
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Yulia Rubanova
University of Toronto
Co-authored papers 1
Ang Cui
Massachusetts Institute of Technology
Co-authored papers 1
Release 1.2